Changeset 4971
- Timestamp:
- Jun 22, 2021 5:22:02 PM (2 years ago)
- Location:
- trunk/help
- Files:
-
- 28 added
- 21 deleted
- 3 edited
Legend:
- Unmodified
- Added
- Removed
-
trunk/help/gsasII-phase.html
r4969 r4971 24 24 <o:DocumentProperties> 25 25 <o:Author>Von Dreele</o:Author> 26 <o:LastAuthor> Toby, Brian H.</o:LastAuthor>27 <o:Revision> 25</o:Revision>28 <o:TotalTime>5 122</o:TotalTime>26 <o:LastAuthor>Von Dreele, Robert B.</o:LastAuthor> 27 <o:Revision>31</o:Revision> 28 <o:TotalTime>5325</o:TotalTime> 29 29 <o:Created>2021-06-20T02:30:00Z</o:Created> 30 <o:LastSaved>2021-06-22T 16:05:00Z</o:LastSaved>31 <o:Pages> 22</o:Pages>32 <o:Words>8 277</o:Words>33 <o:Characters>47 182</o:Characters>30 <o:LastSaved>2021-06-22T22:15:00Z</o:LastSaved> 31 <o:Pages>1</o:Pages> 32 <o:Words>8400</o:Words> 33 <o:Characters>47880</o:Characters> 34 34 <o:Company>Argonne National Laboratory</o:Company> 35 <o:Lines>39 3</o:Lines>36 <o:Paragraphs>11 0</o:Paragraphs>37 <o:CharactersWithSpaces>5 5349</o:CharactersWithSpaces>35 <o:Lines>399</o:Lines> 36 <o:Paragraphs>112</o:Paragraphs> 37 <o:CharactersWithSpaces>56168</o:CharactersWithSpaces> 38 38 <o:Version>16.00</o:Version> 39 39 </o:DocumentProperties> … … 42 42 </o:OfficeDocumentSettings> 43 43 </xml><![endif]--> 44 <link rel=dataStoreItem href="gsasII-phase_files/item005 4.xml"45 target="gsasII-phase_files/props05 5.xml">44 <link rel=dataStoreItem href="gsasII-phase_files/item0058.xml" 45 target="gsasII-phase_files/props059.xml"> 46 46 <link rel=themeData href="gsasII-phase_files/themedata.thmx"> 47 47 <link rel=colorSchemeMapping href="gsasII-phase_files/colorschememapping.xml"> 48 48 <!--[if gte mso 9]><xml> 49 49 <w:WordDocument> 50 <w:View>Print</w:View> 51 <w:Zoom>197</w:Zoom> 50 <w:Zoom>188</w:Zoom> 52 51 <w:SpellingState>Clean</w:SpellingState> 53 52 <w:GrammarState>Clean</w:GrammarState> … … 689 688 {font-family:Wingdings; 690 689 panose-1:5 0 0 0 0 0 0 0 0 0; 691 mso-font-charset: 0;692 mso-generic-font-family: decorative;690 mso-font-charset:2; 691 mso-generic-font-family:auto; 693 692 mso-font-pitch:variable; 694 mso-font-signature: 3 0 0 0 10;}693 mso-font-signature:0 268435456 0 0 -2147483648 0;} 695 694 @font-face 696 695 {font-family:"Cambria Math"; … … 699 698 mso-generic-font-family:roman; 700 699 mso-font-pitch:variable; 701 mso-font-signature:-5368 70145 1107305727 00 415 0;}700 mso-font-signature:-536869121 1107305727 33554432 0 415 0;} 702 701 @font-face 703 702 {font-family:Calibri; … … 1333 1332 {mso-list-id:142163818; 1334 1333 mso-list-type:hybrid; 1335 mso-list-template-ids: 773461610 67698703 6769871367698715 67698703 67698713 67698715 67698703 67698713 67698715;}1334 mso-list-template-ids:-582585592 67698703 1931775674 67698715 67698703 67698713 67698715 67698703 67698713 67698715;} 1336 1335 @list l0:level1 1337 1336 {mso-level-tab-stop:none; 1338 1337 mso-level-number-position:left; 1338 margin-left:73.2pt; 1339 1339 text-indent:-.25in;} 1340 1340 @list l0:level2 … … 1342 1342 mso-level-tab-stop:none; 1343 1343 mso-level-number-position:left; 1344 text-indent:-.25in;} 1344 margin-left:121.5pt; 1345 text-indent:-.25in; 1346 mso-ansi-font-weight:normal; 1347 mso-bidi-font-weight:normal;} 1345 1348 @list l0:level3 1346 1349 {mso-level-number-format:roman-lower; 1347 1350 mso-level-tab-stop:none; 1348 1351 mso-level-number-position:right; 1352 margin-left:145.2pt; 1349 1353 text-indent:-9.0pt;} 1350 1354 @list l0:level4 1351 {mso-level-tab-stop:2.0in; 1352 mso-level-number-position:left; 1355 {mso-level-tab-stop:181.2pt; 1356 mso-level-number-position:left; 1357 margin-left:181.2pt; 1353 1358 text-indent:-.25in;} 1354 1359 @list l0:level5 1355 {mso-level-tab-stop:2.5in; 1356 mso-level-number-position:left; 1360 {mso-level-tab-stop:217.2pt; 1361 mso-level-number-position:left; 1362 margin-left:217.2pt; 1357 1363 text-indent:-.25in;} 1358 1364 @list l0:level6 1359 {mso-level-tab-stop:3.0in; 1360 mso-level-number-position:left; 1365 {mso-level-tab-stop:253.2pt; 1366 mso-level-number-position:left; 1367 margin-left:253.2pt; 1361 1368 text-indent:-.25in;} 1362 1369 @list l0:level7 1363 {mso-level-tab-stop:3.5in; 1364 mso-level-number-position:left; 1370 {mso-level-tab-stop:289.2pt; 1371 mso-level-number-position:left; 1372 margin-left:289.2pt; 1365 1373 text-indent:-.25in;} 1366 1374 @list l0:level8 1367 {mso-level-tab-stop:4.0in; 1368 mso-level-number-position:left; 1375 {mso-level-tab-stop:325.2pt; 1376 mso-level-number-position:left; 1377 margin-left:325.2pt; 1369 1378 text-indent:-.25in;} 1370 1379 @list l0:level9 1371 {mso-level-tab-stop:4.5in; 1372 mso-level-number-position:left; 1380 {mso-level-tab-stop:361.2pt; 1381 mso-level-number-position:left; 1382 margin-left:361.2pt; 1373 1383 text-indent:-.25in;} 1374 1384 @list l1 … … 1449 1459 font-family:Wingdings;} 1450 1460 @list l2 1451 {mso-list-id:232549586;1452 mso-list-type:hybrid;1453 mso-list-template-ids:371738664 67698689 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;}1454 @list l2:level11455 {mso-level-number-format:bullet;1456 mso-level-text:;1457 mso-level-tab-stop:none;1458 mso-level-number-position:left;1459 margin-left:1.0in;1460 text-indent:-.25in;1461 font-family:Symbol;}1462 @list l2:level21463 {mso-level-number-format:bullet;1464 mso-level-text:o;1465 mso-level-tab-stop:none;1466 mso-level-number-position:left;1467 margin-left:1.5in;1468 text-indent:-.25in;1469 font-family:"Courier New";}1470 @list l2:level31471 {mso-level-number-format:bullet;1472 mso-level-text:;1473 mso-level-tab-stop:none;1474 mso-level-number-position:left;1475 margin-left:2.0in;1476 text-indent:-.25in;1477 font-family:Wingdings;}1478 @list l2:level41479 {mso-level-number-format:bullet;1480 mso-level-text:;1481 mso-level-tab-stop:none;1482 mso-level-number-position:left;1483 margin-left:2.5in;1484 text-indent:-.25in;1485 font-family:Symbol;}1486 @list l2:level51487 {mso-level-number-format:bullet;1488 mso-level-text:o;1489 mso-level-tab-stop:none;1490 mso-level-number-position:left;1491 margin-left:3.0in;1492 text-indent:-.25in;1493 font-family:"Courier New";}1494 @list l2:level61495 {mso-level-number-format:bullet;1496 mso-level-text:;1497 mso-level-tab-stop:none;1498 mso-level-number-position:left;1499 margin-left:3.5in;1500 text-indent:-.25in;1501 font-family:Wingdings;}1502 @list l2:level71503 {mso-level-number-format:bullet;1504 mso-level-text:;1505 mso-level-tab-stop:none;1506 mso-level-number-position:left;1507 margin-left:4.0in;1508 text-indent:-.25in;1509 font-family:Symbol;}1510 @list l2:level81511 {mso-level-number-format:bullet;1512 mso-level-text:o;1513 mso-level-tab-stop:none;1514 mso-level-number-position:left;1515 margin-left:4.5in;1516 text-indent:-.25in;1517 font-family:"Courier New";}1518 @list l2:level91519 {mso-level-number-format:bullet;1520 mso-level-text:;1521 mso-level-tab-stop:none;1522 mso-level-number-position:left;1523 margin-left:5.0in;1524 text-indent:-.25in;1525 font-family:Wingdings;}1526 @list l31527 1461 {mso-list-id:248927538; 1528 1462 mso-list-type:hybrid; 1529 1463 mso-list-template-ids:1455452774 67698703 67698713 67698715 67698703 67698713 67698715 67698703 67698713 67698715;} 1530 @list l 3:level11464 @list l2:level1 1531 1465 {mso-level-tab-stop:none; 1532 1466 mso-level-number-position:left; 1533 1467 text-indent:-.25in;} 1534 @list l 3:level21468 @list l2:level2 1535 1469 {mso-level-number-format:alpha-lower; 1536 1470 mso-level-tab-stop:none; 1537 1471 mso-level-number-position:left; 1538 1472 text-indent:-.25in;} 1539 @list l 3:level31473 @list l2:level3 1540 1474 {mso-level-number-format:roman-lower; 1541 1475 mso-level-tab-stop:none; 1542 1476 mso-level-number-position:right; 1543 1477 text-indent:-9.0pt;} 1544 @list l 3:level41478 @list l2:level4 1545 1479 {mso-level-tab-stop:none; 1546 1480 mso-level-number-position:left; 1547 1481 text-indent:-.25in;} 1548 @list l 3:level51482 @list l2:level5 1549 1483 {mso-level-number-format:alpha-lower; 1550 1484 mso-level-tab-stop:none; 1551 1485 mso-level-number-position:left; 1552 1486 text-indent:-.25in;} 1553 @list l 3:level61487 @list l2:level6 1554 1488 {mso-level-number-format:roman-lower; 1555 1489 mso-level-tab-stop:none; 1556 1490 mso-level-number-position:right; 1557 1491 text-indent:-9.0pt;} 1558 @list l 3:level71492 @list l2:level7 1559 1493 {mso-level-tab-stop:none; 1560 1494 mso-level-number-position:left; 1561 1495 text-indent:-.25in;} 1562 @list l 3:level81496 @list l2:level8 1563 1497 {mso-level-number-format:alpha-lower; 1564 1498 mso-level-tab-stop:none; 1565 1499 mso-level-number-position:left; 1566 1500 text-indent:-.25in;} 1567 @list l 3:level91501 @list l2:level9 1568 1502 {mso-level-number-format:roman-lower; 1569 1503 mso-level-tab-stop:none; 1570 1504 mso-level-number-position:right; 1571 1505 text-indent:-9.0pt;} 1506 @list l3 1507 {mso-list-id:617220658; 1508 mso-list-type:hybrid; 1509 mso-list-template-ids:1177170962 67698703 67698713 67698715 67698703 67698713 67698715 67698703 67698713 67698715;} 1510 @list l3:level1 1511 {mso-level-tab-stop:none; 1512 mso-level-number-position:left; 1513 text-indent:-.25in;} 1514 @list l3:level2 1515 {mso-level-tab-stop:1.0in; 1516 mso-level-number-position:left; 1517 text-indent:-.25in;} 1518 @list l3:level3 1519 {mso-level-tab-stop:1.5in; 1520 mso-level-number-position:left; 1521 text-indent:-.25in;} 1522 @list l3:level4 1523 {mso-level-tab-stop:2.0in; 1524 mso-level-number-position:left; 1525 text-indent:-.25in;} 1526 @list l3:level5 1527 {mso-level-tab-stop:2.5in; 1528 mso-level-number-position:left; 1529 text-indent:-.25in;} 1530 @list l3:level6 1531 {mso-level-tab-stop:3.0in; 1532 mso-level-number-position:left; 1533 text-indent:-.25in;} 1534 @list l3:level7 1535 {mso-level-tab-stop:3.5in; 1536 mso-level-number-position:left; 1537 text-indent:-.25in;} 1538 @list l3:level8 1539 {mso-level-tab-stop:4.0in; 1540 mso-level-number-position:left; 1541 text-indent:-.25in;} 1542 @list l3:level9 1543 {mso-level-tab-stop:4.5in; 1544 mso-level-number-position:left; 1545 text-indent:-.25in;} 1572 1546 @list l4 1573 {mso-list-id: 557594537;1547 {mso-list-id:885795814; 1574 1548 mso-list-type:hybrid; 1575 mso-list-template-ids: 36574402 67698689 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;}1549 mso-list-template-ids:-1253415012 67698689 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;} 1576 1550 @list l4:level1 1577 1551 {mso-level-number-format:bullet; … … 1579 1553 mso-level-tab-stop:none; 1580 1554 mso-level-number-position:left; 1581 margin-left: 1.0in;1555 margin-left:.25in; 1582 1556 text-indent:-.25in; 1583 1557 font-family:Symbol;} … … 1587 1561 mso-level-tab-stop:none; 1588 1562 mso-level-number-position:left; 1589 margin-left: 1.5in;1563 margin-left:.75in; 1590 1564 text-indent:-.25in; 1591 1565 font-family:"Courier New";} … … 1595 1569 mso-level-tab-stop:none; 1596 1570 mso-level-number-position:left; 1597 margin-left: 2.0in;1571 margin-left:1.25in; 1598 1572 text-indent:-.25in; 1599 1573 font-family:Wingdings;} … … 1603 1577 mso-level-tab-stop:none; 1604 1578 mso-level-number-position:left; 1605 margin-left: 2.5in;1579 margin-left:1.75in; 1606 1580 text-indent:-.25in; 1607 1581 font-family:Symbol;} … … 1611 1585 mso-level-tab-stop:none; 1612 1586 mso-level-number-position:left; 1613 margin-left: 3.0in;1587 margin-left:2.25in; 1614 1588 text-indent:-.25in; 1615 1589 font-family:"Courier New";} … … 1619 1593 mso-level-tab-stop:none; 1620 1594 mso-level-number-position:left; 1621 margin-left: 3.5in;1595 margin-left:2.75in; 1622 1596 text-indent:-.25in; 1623 1597 font-family:Wingdings;} … … 1627 1601 mso-level-tab-stop:none; 1628 1602 mso-level-number-position:left; 1629 margin-left: 4.0in;1603 margin-left:3.25in; 1630 1604 text-indent:-.25in; 1631 1605 font-family:Symbol;} … … 1635 1609 mso-level-tab-stop:none; 1636 1610 mso-level-number-position:left; 1637 margin-left: 4.5in;1611 margin-left:3.75in; 1638 1612 text-indent:-.25in; 1639 1613 font-family:"Courier New";} … … 1643 1617 mso-level-tab-stop:none; 1644 1618 mso-level-number-position:left; 1645 margin-left: 5.0in;1619 margin-left:4.25in; 1646 1620 text-indent:-.25in; 1647 1621 font-family:Wingdings;} 1648 1622 @list l5 1649 {mso-list-id:616839934; 1650 mso-list-type:hybrid; 1651 mso-list-template-ids:-994159120 67698689 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;} 1623 {mso-list-id:919948450; 1624 mso-list-template-ids:-445226636;} 1652 1625 @list l5:level1 1653 {mso-level-number-format:bullet; 1654 mso-level-text:; 1655 mso-level-tab-stop:none; 1656 mso-level-number-position:left; 1657 margin-left:1.0in; 1658 text-indent:-.25in; 1659 font-family:Symbol;} 1626 {mso-level-tab-stop:none; 1627 mso-level-number-position:left; 1628 text-indent:-.25in;} 1660 1629 @list l5:level2 1661 {mso-level-number-format:bullet; 1662 mso-level-text:o; 1663 mso-level-tab-stop:none; 1664 mso-level-number-position:left; 1665 margin-left:1.5in; 1666 text-indent:-.25in; 1667 font-family:"Courier New";} 1630 {mso-level-number-format:alpha-lower; 1631 mso-level-tab-stop:1.0in; 1632 mso-level-number-position:left; 1633 text-indent:-.25in;} 1668 1634 @list l5:level3 1669 {mso-level-number-format:bullet; 1670 mso-level-text:; 1671 mso-level-tab-stop:none; 1672 mso-level-number-position:left; 1673 margin-left:2.0in; 1674 text-indent:-.25in; 1675 font-family:Wingdings;} 1635 {mso-level-tab-stop:1.5in; 1636 mso-level-number-position:left; 1637 text-indent:-.25in;} 1676 1638 @list l5:level4 1677 {mso-level-number-format:bullet; 1678 mso-level-text:; 1679 mso-level-tab-stop:none; 1680 mso-level-number-position:left; 1681 margin-left:2.5in; 1682 text-indent:-.25in; 1683 font-family:Symbol;} 1639 {mso-level-number-format:alpha-lower; 1640 mso-level-tab-stop:2.0in; 1641 mso-level-number-position:left; 1642 text-indent:-.25in;} 1684 1643 @list l5:level5 1685 {mso-level-number-format:bullet; 1686 mso-level-text:o; 1687 mso-level-tab-stop:none; 1688 mso-level-number-position:left; 1689 margin-left:3.0in; 1690 text-indent:-.25in; 1691 font-family:"Courier New";} 1644 {mso-level-tab-stop:2.5in; 1645 mso-level-number-position:left; 1646 text-indent:-.25in;} 1692 1647 @list l5:level6 1693 {mso-level-number-format:bullet; 1694 mso-level-text:; 1695 mso-level-tab-stop:none; 1696 mso-level-number-position:left; 1697 margin-left:3.5in; 1698 text-indent:-.25in; 1699 font-family:Wingdings;} 1648 {mso-level-tab-stop:3.0in; 1649 mso-level-number-position:left; 1650 text-indent:-.25in;} 1700 1651 @list l5:level7 1701 {mso-level-number-format:bullet; 1702 mso-level-text:; 1703 mso-level-tab-stop:none; 1704 mso-level-number-position:left; 1705 margin-left:4.0in; 1706 text-indent:-.25in; 1707 font-family:Symbol;} 1652 {mso-level-tab-stop:3.5in; 1653 mso-level-number-position:left; 1654 text-indent:-.25in;} 1708 1655 @list l5:level8 1709 {mso-level-number-format:bullet; 1710 mso-level-text:o; 1711 mso-level-tab-stop:none; 1712 mso-level-number-position:left; 1713 margin-left:4.5in; 1714 text-indent:-.25in; 1715 font-family:"Courier New";} 1656 {mso-level-tab-stop:4.0in; 1657 mso-level-number-position:left; 1658 text-indent:-.25in;} 1716 1659 @list l5:level9 1717 {mso-level-number-format:bullet; 1718 mso-level-text:; 1719 mso-level-tab-stop:none; 1720 mso-level-number-position:left; 1721 margin-left:5.0in; 1722 text-indent:-.25in; 1723 font-family:Wingdings;} 1660 {mso-level-tab-stop:4.5in; 1661 mso-level-number-position:left; 1662 text-indent:-.25in;} 1724 1663 @list l6 1725 {mso-list-id:617220658; 1726 mso-list-type:hybrid; 1727 mso-list-template-ids:1177170962 67698703 67698713 67698715 67698703 67698713 67698715 67698703 67698713 67698715;} 1664 {mso-list-id:1005204035; 1665 mso-list-template-ids:-445226636;} 1728 1666 @list l6:level1 1729 1667 {mso-level-tab-stop:none; 1730 1668 mso-level-number-position:left; 1669 margin-left:63.8pt; 1731 1670 text-indent:-.25in;} 1732 1671 @list l6:level2 1733 {mso-level-tab-stop:1.0in;1734 mso-level-number-position:left;1735 text-indent:-.25in;}1736 @list l6:level31737 {mso-level-tab-stop:1.5in;1738 mso-level-number-position:left;1739 text-indent:-.25in;}1740 @list l6:level41741 {mso-level-tab-stop:2.0in;1742 mso-level-number-position:left;1743 text-indent:-.25in;}1744 @list l6:level51745 {mso-level-tab-stop:2.5in;1746 mso-level-number-position:left;1747 text-indent:-.25in;}1748 @list l6:level61749 {mso-level-tab-stop:3.0in;1750 mso-level-number-position:left;1751 text-indent:-.25in;}1752 @list l6:level71753 {mso-level-tab-stop:3.5in;1754 mso-level-number-position:left;1755 text-indent:-.25in;}1756 @list l6:level81757 {mso-level-tab-stop:4.0in;1758 mso-level-number-position:left;1759 text-indent:-.25in;}1760 @list l6:level91761 {mso-level-tab-stop:4.5in;1762 mso-level-number-position:left;1763 text-indent:-.25in;}1764 @list l71765 {mso-list-id:885795814;1766 mso-list-type:hybrid;1767 mso-list-template-ids:-1253415012 67698689 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;}1768 @list l7:level11769 {mso-level-number-format:bullet;1770 mso-level-text:;1771 mso-level-tab-stop:none;1772 mso-level-number-position:left;1773 margin-left:.25in;1774 text-indent:-.25in;1775 font-family:Symbol;}1776 @list l7:level21777 {mso-level-number-format:bullet;1778 mso-level-text:o;1779 mso-level-tab-stop:none;1780 mso-level-number-position:left;1781 margin-left:.75in;1782 text-indent:-.25in;1783 font-family:"Courier New";}1784 @list l7:level31785 {mso-level-number-format:bullet;1786 mso-level-text:;1787 mso-level-tab-stop:none;1788 mso-level-number-position:left;1789 margin-left:1.25in;1790 text-indent:-.25in;1791 font-family:Wingdings;}1792 @list l7:level41793 {mso-level-number-format:bullet;1794 mso-level-text:;1795 mso-level-tab-stop:none;1796 mso-level-number-position:left;1797 margin-left:1.75in;1798 text-indent:-.25in;1799 font-family:Symbol;}1800 @list l7:level51801 {mso-level-number-format:bullet;1802 mso-level-text:o;1803 mso-level-tab-stop:none;1804 mso-level-number-position:left;1805 margin-left:2.25in;1806 text-indent:-.25in;1807 font-family:"Courier New";}1808 @list l7:level61809 {mso-level-number-format:bullet;1810 mso-level-text:;1811 mso-level-tab-stop:none;1812 mso-level-number-position:left;1813 margin-left:2.75in;1814 text-indent:-.25in;1815 font-family:Wingdings;}1816 @list l7:level71817 {mso-level-number-format:bullet;1818 mso-level-text:;1819 mso-level-tab-stop:none;1820 mso-level-number-position:left;1821 margin-left:3.25in;1822 text-indent:-.25in;1823 font-family:Symbol;}1824 @list l7:level81825 {mso-level-number-format:bullet;1826 mso-level-text:o;1827 mso-level-tab-stop:none;1828 mso-level-number-position:left;1829 margin-left:3.75in;1830 text-indent:-.25in;1831 font-family:"Courier New";}1832 @list l7:level91833 {mso-level-number-format:bullet;1834 mso-level-text:;1835 mso-level-tab-stop:none;1836 mso-level-number-position:left;1837 margin-left:4.25in;1838 text-indent:-.25in;1839 font-family:Wingdings;}1840 @list l81841 {mso-list-id:919948450;1842 mso-list-template-ids:-445226636;}1843 @list l8:level11844 {mso-level-tab-stop:none;1845 mso-level-number-position:left;1846 text-indent:-.25in;}1847 @list l8:level21848 {mso-level-number-format:alpha-lower;1849 mso-level-tab-stop:1.0in;1850 mso-level-number-position:left;1851 text-indent:-.25in;}1852 @list l8:level31853 {mso-level-tab-stop:1.5in;1854 mso-level-number-position:left;1855 text-indent:-.25in;}1856 @list l8:level41857 {mso-level-number-format:alpha-lower;1858 mso-level-tab-stop:2.0in;1859 mso-level-number-position:left;1860 text-indent:-.25in;}1861 @list l8:level51862 {mso-level-tab-stop:2.5in;1863 mso-level-number-position:left;1864 text-indent:-.25in;}1865 @list l8:level61866 {mso-level-tab-stop:3.0in;1867 mso-level-number-position:left;1868 text-indent:-.25in;}1869 @list l8:level71870 {mso-level-tab-stop:3.5in;1871 mso-level-number-position:left;1872 text-indent:-.25in;}1873 @list l8:level81874 {mso-level-tab-stop:4.0in;1875 mso-level-number-position:left;1876 text-indent:-.25in;}1877 @list l8:level91878 {mso-level-tab-stop:4.5in;1879 mso-level-number-position:left;1880 text-indent:-.25in;}1881 @list l91882 {mso-list-id:1005204035;1883 mso-list-template-ids:-445226636;}1884 @list l9:level11885 {mso-level-tab-stop:none;1886 mso-level-number-position:left;1887 margin-left:63.8pt;1888 text-indent:-.25in;}1889 @list l9:level21890 1672 {mso-level-number-format:alpha-lower; 1891 1673 mso-level-tab-stop:99.8pt; … … 1893 1675 margin-left:99.8pt; 1894 1676 text-indent:-.25in;} 1895 @list l 9:level31677 @list l6:level3 1896 1678 {mso-level-tab-stop:135.8pt; 1897 1679 mso-level-number-position:left; 1898 1680 margin-left:135.8pt; 1899 1681 text-indent:-.25in;} 1900 @list l 9:level41682 @list l6:level4 1901 1683 {mso-level-number-format:alpha-lower; 1902 1684 mso-level-tab-stop:171.8pt; … … 1904 1686 margin-left:171.8pt; 1905 1687 text-indent:-.25in;} 1906 @list l 9:level51688 @list l6:level5 1907 1689 {mso-level-tab-stop:207.8pt; 1908 1690 mso-level-number-position:left; 1909 1691 margin-left:207.8pt; 1910 1692 text-indent:-.25in;} 1911 @list l 9:level61693 @list l6:level6 1912 1694 {mso-level-tab-stop:243.8pt; 1913 1695 mso-level-number-position:left; 1914 1696 margin-left:243.8pt; 1915 1697 text-indent:-.25in;} 1916 @list l 9:level71698 @list l6:level7 1917 1699 {mso-level-tab-stop:279.8pt; 1918 1700 mso-level-number-position:left; 1919 1701 margin-left:279.8pt; 1920 1702 text-indent:-.25in;} 1921 @list l 9:level81703 @list l6:level8 1922 1704 {mso-level-tab-stop:315.8pt; 1923 1705 mso-level-number-position:left; 1924 1706 margin-left:315.8pt; 1925 1707 text-indent:-.25in;} 1926 @list l 9:level91708 @list l6:level9 1927 1709 {mso-level-tab-stop:351.8pt; 1928 1710 mso-level-number-position:left; 1929 1711 margin-left:351.8pt; 1930 1712 text-indent:-.25in;} 1931 @list l 101713 @list l7 1932 1714 {mso-list-id:1074664733; 1933 1715 mso-list-type:hybrid; 1934 1716 mso-list-template-ids:-861403150 1141245230 67698713 67698703 67698703 67698713 67698715 67698703 67698713 67698715;} 1935 @list l 10:level11717 @list l7:level1 1936 1718 {mso-level-number-format:alpha-lower; 1937 1719 mso-level-tab-stop:none; … … 1940 1722 text-indent:-.25in; 1941 1723 mso-ansi-font-weight:normal;} 1942 @list l 10:level21724 @list l7:level2 1943 1725 {mso-level-number-format:alpha-lower; 1944 1726 mso-level-tab-stop:none; 1945 1727 mso-level-number-position:left; 1946 1728 text-indent:-.25in;} 1947 @list l 10:level31729 @list l7:level3 1948 1730 {mso-level-tab-stop:1.5in; 1949 1731 mso-level-number-position:left; 1950 1732 text-indent:-.25in;} 1951 @list l 10:level41733 @list l7:level4 1952 1734 {mso-level-tab-stop:2.0in; 1953 1735 mso-level-number-position:left; 1954 1736 text-indent:-.25in;} 1955 @list l 10:level51737 @list l7:level5 1956 1738 {mso-level-tab-stop:2.5in; 1957 1739 mso-level-number-position:left; 1958 1740 text-indent:-.25in;} 1959 @list l 10:level61741 @list l7:level6 1960 1742 {mso-level-tab-stop:3.0in; 1961 1743 mso-level-number-position:left; 1962 1744 text-indent:-.25in;} 1963 @list l 10:level71745 @list l7:level7 1964 1746 {mso-level-tab-stop:3.5in; 1965 1747 mso-level-number-position:left; 1966 1748 text-indent:-.25in;} 1967 @list l 10:level81749 @list l7:level8 1968 1750 {mso-level-tab-stop:4.0in; 1969 1751 mso-level-number-position:left; 1970 1752 text-indent:-.25in;} 1971 @list l 10:level91753 @list l7:level9 1972 1754 {mso-level-tab-stop:4.5in; 1973 1755 mso-level-number-position:left; 1974 1756 text-indent:-.25in;} 1975 @list l 111757 @list l8 1976 1758 {mso-list-id:1323200535; 1977 1759 mso-list-type:hybrid; 1978 1760 mso-list-template-ids:-720724778 859726762 67698713 67698715 67698703 67698713 67698715 67698703 67698713 67698715;} 1979 @list l 11:level11761 @list l8:level1 1980 1762 {mso-level-number-format:alpha-lower; 1981 1763 mso-level-tab-stop:none; … … 1983 1765 margin-left:1.0in; 1984 1766 text-indent:-.25in;} 1985 @list l 11:level21767 @list l8:level2 1986 1768 {mso-level-tab-stop:1.0in; 1987 1769 mso-level-number-position:left; 1988 1770 text-indent:-.25in;} 1989 @list l 11:level31771 @list l8:level3 1990 1772 {mso-level-tab-stop:1.5in; 1991 1773 mso-level-number-position:left; 1992 1774 text-indent:-.25in;} 1993 @list l 11:level41775 @list l8:level4 1994 1776 {mso-level-tab-stop:2.0in; 1995 1777 mso-level-number-position:left; 1996 1778 text-indent:-.25in;} 1997 @list l 11:level51779 @list l8:level5 1998 1780 {mso-level-tab-stop:2.5in; 1999 1781 mso-level-number-position:left; 2000 1782 text-indent:-.25in;} 2001 @list l 11:level61783 @list l8:level6 2002 1784 {mso-level-tab-stop:3.0in; 2003 1785 mso-level-number-position:left; 2004 1786 text-indent:-.25in;} 2005 @list l 11:level71787 @list l8:level7 2006 1788 {mso-level-tab-stop:3.5in; 2007 1789 mso-level-number-position:left; 2008 1790 text-indent:-.25in;} 2009 @list l 11:level81791 @list l8:level8 2010 1792 {mso-level-tab-stop:4.0in; 2011 1793 mso-level-number-position:left; 2012 1794 text-indent:-.25in;} 2013 @list l 11:level91795 @list l8:level9 2014 1796 {mso-level-tab-stop:4.5in; 2015 1797 mso-level-number-position:left; 2016 1798 text-indent:-.25in;} 2017 @list l 121799 @list l9 2018 1800 {mso-list-id:1902254926; 2019 1801 mso-list-template-ids:1270895724;} 2020 @list l 12:level11802 @list l9:level1 2021 1803 {mso-level-tab-stop:.5in; 2022 1804 mso-level-number-position:left; 2023 1805 text-indent:-.25in;} 2024 @list l 12:level21806 @list l9:level2 2025 1807 {mso-level-tab-stop:1.0in; 2026 1808 mso-level-number-position:left; 2027 1809 text-indent:-.25in;} 2028 @list l 12:level31810 @list l9:level3 2029 1811 {mso-level-tab-stop:1.5in; 2030 1812 mso-level-number-position:left; 2031 1813 text-indent:-.25in;} 2032 @list l 12:level41814 @list l9:level4 2033 1815 {mso-level-tab-stop:2.0in; 2034 1816 mso-level-number-position:left; 2035 1817 text-indent:-.25in;} 2036 @list l 12:level51818 @list l9:level5 2037 1819 {mso-level-tab-stop:2.5in; 2038 1820 mso-level-number-position:left; 2039 1821 text-indent:-.25in;} 2040 @list l 12:level61822 @list l9:level6 2041 1823 {mso-level-tab-stop:3.0in; 2042 1824 mso-level-number-position:left; 2043 1825 text-indent:-.25in;} 2044 @list l 12:level71826 @list l9:level7 2045 1827 {mso-level-tab-stop:3.5in; 2046 1828 mso-level-number-position:left; 2047 1829 text-indent:-.25in;} 2048 @list l 12:level81830 @list l9:level8 2049 1831 {mso-level-tab-stop:4.0in; 2050 1832 mso-level-number-position:left; 2051 1833 text-indent:-.25in;} 2052 @list l 12:level91834 @list l9:level9 2053 1835 {mso-level-tab-stop:4.5in; 2054 1836 mso-level-number-position:left; 2055 1837 text-indent:-.25in;} 2056 @list l1 31838 @list l10 2057 1839 {mso-list-id:2114591880; 2058 1840 mso-list-template-ids:-445226636;} 2059 @list l1 3:level11841 @list l10:level1 2060 1842 {mso-level-tab-stop:none; 2061 1843 mso-level-number-position:left; 2062 1844 text-indent:-.25in;} 2063 @list l1 3:level21845 @list l10:level2 2064 1846 {mso-level-number-format:alpha-lower; 2065 1847 mso-level-tab-stop:1.0in; 2066 1848 mso-level-number-position:left; 2067 1849 text-indent:-.25in;} 2068 @list l1 3:level31850 @list l10:level3 2069 1851 {mso-level-tab-stop:1.5in; 2070 1852 mso-level-number-position:left; 2071 1853 text-indent:-.25in;} 2072 @list l1 3:level41854 @list l10:level4 2073 1855 {mso-level-number-format:alpha-lower; 2074 1856 mso-level-tab-stop:2.0in; 2075 1857 mso-level-number-position:left; 2076 1858 text-indent:-.25in;} 2077 @list l1 3:level51859 @list l10:level5 2078 1860 {mso-level-tab-stop:2.5in; 2079 1861 mso-level-number-position:left; 2080 1862 text-indent:-.25in;} 2081 @list l1 3:level61863 @list l10:level6 2082 1864 {mso-level-tab-stop:3.0in; 2083 1865 mso-level-number-position:left; 2084 1866 text-indent:-.25in;} 2085 @list l1 3:level71867 @list l10:level7 2086 1868 {mso-level-tab-stop:3.5in; 2087 1869 mso-level-number-position:left; 2088 1870 text-indent:-.25in;} 2089 @list l1 3:level81871 @list l10:level8 2090 1872 {mso-level-tab-stop:4.0in; 2091 1873 mso-level-number-position:left; 2092 1874 text-indent:-.25in;} 2093 @list l1 3:level91875 @list l10:level9 2094 1876 {mso-level-tab-stop:4.5in; 2095 1877 mso-level-number-position:left; … … 2165 1947 <v:imagedata src="gsas2logo.png"/> 2166 1948 <w:wrap type="square" anchory="line"/> 2167 </v:shape><![endif]--><![if !vml]><img width= 96 height=96src=gsas2logo.png1949 </v:shape><![endif]--><![if !vml]><img width=128 height=128 src=gsas2logo.png 2168 1950 align=right alt="Description: GSAS-II logo" v:shapes="Picture_x0020_2"><![endif]><span 2169 1951 style='mso-fareast-font-family:"Times New Roman"'>Help for GSAS-II – Phase Tree … … 2171 1953 2172 1954 <p class=MsoNormal><span style='mso-fareast-font-family:"Times New Roman"'>This 2173 is where to find help on the Phase Tree items in GSAS-II. Note that the window 2174 displayed for this page has multiple tabs. The help information is broken down 2175 by tabsection. <o:p></o:p></span></p>1955 is where to find help on the Phase Tree items in GSAS-II. Note that the window displayed 1956 for this page has multiple tabs. The help information is broken down by tab 1957 section. <o:p></o:p></span></p> 2176 1958 2177 1959 <h2 style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a … … 2208 1990 text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2209 1991 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 2210 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span2211 dir=LTR></span><span style='mso-fareast-font-family:"Times New Roman"'>Menu ‘<b 2212 style='mso-bidi-font-weight:normal'>Compute’</b> – The compute menu shows 2213 computations that are possiblefor this phase. </span></p>2214 2215 <p class=MsoNormal style='margin-left:1 .5in;mso-add-space:auto;text-indent:1992 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 1993 style='mso-fareast-font-family:"Times New Roman"'>Menu ‘<b style='mso-bidi-font-weight: 1994 normal'>Compute’</b> – The compute menu shows computations that are possible 1995 for this phase. </span></p> 1996 1997 <p class=MsoNormal style='margin-left:121.5pt;mso-add-space:auto;text-indent: 2216 1998 -.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2217 1999 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 2218 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2219 dir=LTR></span><b><span style='mso-fareast-font-family:"Times New Roman"'>Fourier 2220 maps</span></b><span style='mso-fareast-font-family:"Times New Roman"'><o:p></o:p></span></p> 2221 2222 <p class=MsoNormal style='margin-left:.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2000 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2001 style='mso-fareast-font-family:"Times New Roman"'>Fourier map - </span></b><span 2223 2002 style='mso-fareast-font-family:"Times New Roman"'>compute Fourier maps 2224 2003 according to the controls set at bottom of General page.<o:p></o:p></span></p> 2225 2004 2226 <p class=Mso Normal style='margin-left:1.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span2227 style='mso-fareast-font-family:"Times New Roman"'>Search maps</span></b><span2228 style='mso-fareast-font-family:"Times New Roman"'>< o:p></o:p></span></p>2229 2230 <p class=MsoNormal style='margin-left:.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span2005 <p class=MsoListParagraphCxSpFirst style='margin-left:121.5pt;mso-add-space: 2006 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2007 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 2008 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2009 style='mso-fareast-font-family:"Times New Roman"'>Search map - </span></b><span 2231 2010 style='mso-fareast-font-family:"Times New Roman"'>search the computed Fourier 2232 2011 map. Peaks that are above ‘Peak cutoff’ % of the maximum will be found in this … … 2234 2013 href="#Phase-Map_peaks">Map peaks</a>’ page. This page will immediately be <span 2235 2014 class=GramE>shown</span> and the peaks will be shown on the structure drawing 2236 for this phase as white 3-D crosses.< o:p></o:p></span></p>2237 2238 <p class=Mso Normal style='margin-left:1.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span2239 style='mso-fareast-font-family:"Times New Roman"'>Charge flipping </span></b><span2240 style='mso-fareast-font-family:"Times New Roman"'>< o:p></o:p></span></p>2241 2242 <p class=MsoNormal style='margin-left:.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span2015 for this phase as white 3-D crosses.<b><o:p></o:p></b></span></p> 2016 2017 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2018 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2019 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 2020 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2021 style='mso-fareast-font-family:"Times New Roman"'>Charge flipping - </span></b><span 2243 2022 style='mso-fareast-font-family:"Times New Roman"'>This performs a charge 2244 2023 flipping <i style='mso-bidi-font-style:normal'>ab initio</i> structure solution … … 2253 2032 doesn’t necessarily fall continuously), press the <b style='mso-bidi-font-weight: 2254 2033 normal'>Cancel</b> button to stop the charge flipping. The resulting map will 2255 be positioned to properly place symmetry operators (NB: depends on the quality 2256 of the resulting phases), searched for peaks and the display shifts to <b 2257 style='mso-bidi-font-weight:normal'>Map peaks</b> to show them.<o:p></o:p></span></p> 2258 2259 <p class=MsoNormal style='margin-left:1.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span 2260 style='mso-fareast-font-family:"Times New Roman"'>Clear map </span></b><span 2261 style='mso-fareast-font-family:"Times New Roman"'><o:p></o:p></span></p> 2262 2263 <p class=MsoNormal style='margin-left:.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2264 style='mso-fareast-font-family:"Times New Roman"'>This clears any 2034 be positioned to properly place symmetry operators (<span class=GramE>NB:</span> 2035 depends on the quality of the resulting phases), searched for peaks and the 2036 display shifts to <b style='mso-bidi-font-weight:normal'>Map peaks</b> to show 2037 them.<b><o:p></o:p></b></span></p> 2038 2039 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2040 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2041 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 2042 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2043 style='mso-fareast-font-family:"Times New Roman"'>4D Charge flipping – </span></b><span 2044 style='mso-fareast-font-family:"Times New Roman"'>Charge flipping is done for a 2045 modulated structure.<o:p></o:p></span></p> 2046 2047 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2048 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 99.0pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2049 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 2050 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2051 style='mso-fareast-font-family:"Times New Roman"'>Clear map -</span></b><span 2052 style='mso-fareast-font-family:"Times New Roman"'> This clears any 2265 2053 Fourier/charge flip map from memory; the Fourier map controls are also cleared.<o:p></o:p></span></p> 2266 2054 2267 <p class=MsoNormal style='margin-left:1.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span 2268 style='mso-fareast-font-family:"Times New Roman"'>Transform</span></b><span 2269 style='mso-fareast-font-family:"Times New Roman"'><o:p></o:p></span></p> 2270 2271 <p class=MsoNormal style='margin-left:.5in;mso-add-space:auto;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2272 style='mso-fareast-font-family:"Times New Roman"'>This allows for a change in 2055 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2056 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2057 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>f.<span 2058 style='font:7.0pt "Times New Roman"'> 2059 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>MC/SA</span></b><span 2060 style='mso-fareast-font-family:"Times New Roman"'> – Perform Monte 2061 Carlo/Simulated Annealing structure solution using the model as set up in the 2062 MC/SA tab.<o:p></o:p></span></p> 2063 2064 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2065 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2066 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>g.<span 2067 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2068 style='mso-fareast-font-family:"Times New Roman"'>Multi MC/SA</span></b><span 2069 style='mso-fareast-font-family:"Times New Roman"'> – Perform multiple Monte 2070 Carlo/Simulated Annealing structure solutions, accumulating the best ones as 2071 set up in the MC/SA tab.<o:p></o:p></span></p> 2072 2073 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2074 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2075 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>h.<span 2076 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2077 style='mso-fareast-font-family:"Times New Roman"'>Transform </span></b><span 2078 style='mso-fareast-font-family:"Times New Roman"'>- This allows for a change in 2273 2079 axes, symmetry or unit cell. It is also used to create a magnetic phase from a 2274 2080 chemical (nuclear) phase. One important transformation that can be done here is 2275 for Origin 1 settings to Origin 2 (<a href="#_Origin_1_->">described below</a>) 2276 <o:p></o:p></span></p> 2081 for Origin 1 settings to Origin 2 (<a href="#_Origin_1_->">described below</a>).<b><o:p></o:p></b></span></p> 2082 2083 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2084 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2085 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>i.<span 2086 style='font:7.0pt "Times New Roman"'> 2087 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>Compare 2088 – </span></b><span style='mso-fareast-font-family:"Times New Roman"'>Compares 2089 idealized <span class=SpellE>polyhedra</span> (tetrahedron & octahedron) to 2090 those obtained from a Reverse Monte Carlo run.<b><o:p></o:p></b></span></p> 2091 2092 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2093 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2094 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>j.<span 2095 style='font:7.0pt "Times New Roman"'> 2096 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>Select 2097 magnetic/subgroup phase – </span></b><span style='mso-fareast-font-family:"Times New Roman"'>allows 2098 selection of the results from a magnetic subgroup analysis done in the 2099 Phase/Unit cells list tab. This will generate a new magnetic phase. Can also be 2100 used to select from possible subgroups of a nonmagnetic super group for 2101 possible symmetry reduction. See <a href="gsasII-pwdr.html#PWDR_Unit_Cells_List">Unit 2102 cells list</a> for further information.<b><o:p></o:p></b></span></p> 2103 2104 <p class=MsoListParagraphCxSpLast style='margin-left:121.5pt;mso-add-space: 2105 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:.5in 45.8pt 91.6pt 1.5in 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2106 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>k.<span 2107 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b><span 2108 style='mso-fareast-font-family:"Times New Roman"'>Protein quality</span></b><span 2109 style='mso-fareast-font-family:"Times New Roman"'> – evaluate protein quality 2110 by python versions of <span class=SpellE>errat</span> & errat2 codes by <span 2111 class=SpellE>Colovos</span>, C. & <span class=SpellE>Yeates</span>, T.O. Protein 2112 Science 2, 1511-1519 (1991).<b><o:p></o:p></b></span></p> 2277 2113 2278 2114 <p class=MsoNormal style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 2280 2116 text-underline:none'><o:p> </o:p></span></span></p> 2281 2117 2282 <p class=MsoListParagraphCxSpFirst style='margin-left: 1.0in;mso-add-space:auto;2283 text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2118 <p class=MsoListParagraphCxSpFirst style='margin-left:73.2pt;mso-add-space: 2119 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2284 2120 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2285 2121 color:windowtext;text-decoration:none;text-underline:none'><span 2286 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 2287 </span></span></span></span><![endif]><span dir=LTR></span><span2288 style='mso-fareast-font-family:"Times New Roman"'>The items in the upper part 2289 of the General page that can be changed are Phase name, Phase type, Space 2290 group, unit cell parameters & refine flag. These are described in turn:<span2291 class=MsoHyperlink><spanstyle='color:windowtext'><o:p></o:p></span></span></span></p>2292 2293 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2122 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 2123 </span></span></span></span><![endif]><span style='mso-fareast-font-family: 2124 "Times New Roman"'>The items in the upper part of the General page that can be 2125 changed are Phase name, Phase type, Space group, unit cell parameters & 2126 refine flag. These are described in turn:<span class=MsoHyperlink><span 2127 style='color:windowtext'><o:p></o:p></span></span></span></p> 2128 2129 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2294 2130 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2295 2131 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2296 2132 color:windowtext;text-decoration:none;text-underline:none'><span 2297 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2298 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2299 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Phase name</span></b><span2133 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2134 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2135 style='mso-fareast-font-family:"Times New Roman"'>Phase name</span></b><span 2300 2136 style='mso-fareast-font-family:"Times New Roman"'> – this is the name assigned 2301 to this phase. It should only be changed when the phase is initialized or2302 imported.<span class=MsoHyperlink><spanstyle='color:windowtext'><o:p></o:p></span></span></span></p>2303 2304 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2137 to this phase. It can be changed at any time.<span class=MsoHyperlink><span 2138 style='color:windowtext'><o:p></o:p></span></span></span></p> 2139 2140 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2305 2141 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2306 2142 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2307 2143 color:windowtext;text-decoration:none;text-underline:none'><span 2308 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2309 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2310 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Phase type – </span></b><span2144 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2145 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2146 style='mso-fareast-font-family:"Times New Roman"'>Phase type – </span></b><span 2311 2147 style='mso-fareast-font-family:"Times New Roman"'>this can only be set when 2312 2148 there are no atoms in the Atoms page for this phase. Select it when the phase 2313 2149 is initialized.<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2314 2150 2315 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2151 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2316 2152 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2317 2153 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2318 2154 color:windowtext;text-decoration:none;text-underline:none'><span 2319 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2320 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2321 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Space group</span></b><span2155 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2156 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2157 style='mso-fareast-font-family:"Times New Roman"'>Space group</span></b><span 2322 2158 style='mso-fareast-font-family:"Times New Roman"'> – this should be set when 2323 2159 the phase is initialized; it can be changed later. Be careful about the impact 2324 2160 on Atom site symmetry and multiplicity if you do. GSAS-II will recognize any 2325 2161 legal space group symbol using the short Hermann-<span class=SpellE>Mauguin</span> 2326 forms; put a space between the axial fields (<span class=GramE>e.g.</span> ‘F d 2327 3 m’ not ‘Fd3m’). For space groups with a choice of origin (<span class=GramE>e.g.</span> 2328 F d 3 m), GSAS-II always uses the 2<sup>nd</sup> setting where the center of 2329 inversion is located at the origin. The choice of space group will set the available 2330 unit cell parameters.<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2331 2332 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2162 forms; put a space between the axial fields (e.g. ‘F d 3 m’ not ‘Fd3m’; ‘F d 3 2163 m’ is understood as well as ‘F d -3 m’). For space groups with a choice of 2164 origin (e.g. F d 3 m), GSAS-II always uses the 2<sup>nd</sup> setting where the 2165 center of inversion is located at the origin. The choice of space group will 2166 set the available unit cell parameters.<span class=MsoHyperlink><span 2167 style='color:windowtext'><o:p></o:p></span></span></span></p> 2168 2169 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2333 2170 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2334 2171 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 2335 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2336 dir=LTR></span><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 2337 "Times New Roman"'>Refine unit cell</span></b><span style='mso-fareast-font-family: 2338 "Times New Roman"'> – set this flag to refine the unit cell parameters in a 2339 Rietveld or Pawley refinement. The actual parameters refined are the symmetry 2340 allowed terms (A<sub>0</sub>-A<sub>5</sub>) in the expression</span><i 2341 style='mso-bidi-font-style:normal'><span style='font-family:"Cambria Math",serif; 2342 mso-fareast-font-family:"Times New Roman"'><br> 2343 </span></i><!--[if gte msEquation 12]><m:oMathPara><m:oMath><m:sSup><m:sSupPr><span 2172 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2173 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>Refine 2174 unit cell</span></b><span style='mso-fareast-font-family:"Times New Roman"'> – 2175 set this flag to refine the unit cell parameters in a Rietveld or Pawley 2176 refinement. The actual parameters refined are the symmetry allowed terms (A<sub>0</sub>-A<sub>5</sub>) 2177 in the expression</span><i style='mso-bidi-font-style:normal'><span 2178 style='font-family:"Cambria Math",serif;mso-fareast-font-family:"Times New Roman"'><br> 2179 </span></i><!--[if gte msEquation 12]><m:oMathPara><m:oMathParaPr><m:jc m:val="left"/></m:oMathParaPr><m:oMath><m:sSup><m:sSupPr><span 2344 2180 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; 2345 2181 mso-hansi-font-family:"Cambria Math";font-style:italic;mso-bidi-font-style: … … 2426 2262 style='mso-bidi-font-style:normal'><span style='font-family:"Cambria Math",serif; 2427 2263 mso-fareast-font-family:"Times New Roman"'><m:r>kl</m:r></span></i></m:oMath></m:oMathPara><![endif]--><![if !msEquation]><span 2428 style='font-size:12.0pt;font-family:"Calibri",sans-serif;mso-ascii-theme-font: 2429 minor-latin;mso-fareast-font-family:"Times New Roman";mso-fareast-theme-font: 2430 minor-fareast;mso-hansi-theme-font:minor-latin;mso-bidi-font-family:Arial; 2431 mso-bidi-theme-font:minor-bidi;mso-ansi-language:EN-US;mso-fareast-language: 2432 EN-US;mso-bidi-language:HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 2433 type="#_x0000_t75" style='width:252pt;height:14pt'> 2434 <v:imagedata src="gsasII-phase_files/image001.emz" o:title="" chromakey="white"/> 2435 </v:shape><![endif]--><![if !vml]><img width=252 height=14 2436 src="gsasII-phase_files/image002.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 2437 2438 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2264 style='font-size:11.0pt;line-height:107%;font-family:"Calibri",sans-serif; 2265 mso-ascii-theme-font:minor-latin;mso-fareast-font-family:"Times New Roman"; 2266 mso-fareast-theme-font:minor-fareast;mso-hansi-theme-font:minor-latin; 2267 mso-bidi-font-family:"Times New Roman";mso-bidi-theme-font:minor-bidi; 2268 mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 2269 id="_x0000_i1025" type="#_x0000_t75" style='width:251.25pt;height:14.25pt'> 2270 <v:imagedata src="gsasII-phase_files/image001.png" o:title="" chromakey="white"/> 2271 </v:shape><![endif]--><![if !vml]><img width=335 height=19 2272 src="gsasII-phase_files/image002.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><br> 2273 <span style='font-family:"Cambria Math",serif;mso-fareast-font-family:"Times New Roman"; 2274 mso-bidi-font-style:italic'>A0-A5 correspond to the reciprocal metric tensor 2275 elements G<sub>11</sub>, G<sub>22</sub>, G<sub>33</sub>, 2*G<sub>12</sub>, 2*G<sub>13</sub> 2276 & 2*G<sub>23</sub>.</span></p> 2277 2278 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2439 2279 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2440 2280 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2441 2281 color:windowtext;text-decoration:none;text-underline:none'><span 2442 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 2443 </span></span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 2444 normal'><span style='mso-fareast-font-family:"Times New Roman"'>a, b, c, alpha, 2445 beta, gamma</span></b><span style='mso-fareast-font-family:"Times New Roman"'> 2446 – lattice parameters; only those permitted by the space group are shown. The <span 2447 class=GramE>volume<span style='mso-spacerun:yes'> </span>is</span> computed 2448 from the values entered.</span><span class=MsoHyperlink><span style='color: 2449 windowtext'><o:p></o:p></span></span></p> 2450 2451 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 2282 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 2283 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2284 style='mso-fareast-font-family:"Times New Roman"'>a, b, c, alpha, beta, gamma</span></b><span 2285 style='mso-fareast-font-family:"Times New Roman"'> – lattice parameters; only 2286 those permitted by the space group are shown. The volume is computed from the 2287 values entered.</span><span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></p> 2288 2289 <p class=MsoListParagraphCxSpMiddle style='margin-left:73.2pt;mso-add-space: 2452 2290 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2453 2291 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2454 2292 color:windowtext;text-decoration:none;text-underline:none'><span 2455 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 2456 </span></span></span></span><![endif]><span dir=LTR></span><span 2457 style='mso-fareast-font-family:"Times New Roman"'>If there are entries in the 2458 Atoms <span class=GramE>page</span> then the Elements table is shown next on 2459 the General page; you may select the isotope (only relevant for neutron 2460 diffraction experiments). The density (just above the Elements) is computed 2461 depending on this choice, the unit cell volume and the atom fractions/site 2462 multiplicities in the entries on the Atoms page.<span class=MsoHyperlink><span 2463 style='color:windowtext'><o:p></o:p></span></span></span></p> 2464 2465 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 2293 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 2294 </span></span></span></span><![endif]><span style='mso-fareast-font-family: 2295 "Times New Roman"'>If there are entries in the Atoms <span class=GramE>page</span> 2296 then the Elements table is shown next on the General page; you may select the 2297 isotope (only relevant for neutron diffraction experiments). The density (just 2298 above the Elements) is computed depending on this choice, the unit cell volume 2299 and the atom fractions/site multiplicities in the entries on the Atoms page.<span 2300 class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2301 2302 <p class=MsoListParagraphCxSpMiddle style='margin-left:73.2pt;mso-add-space: 2466 2303 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2467 2304 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2468 2305 color:windowtext;text-decoration:none;text-underline:none'><span 2469 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 2470 </span></span></span></span><![endif]><span dir=LTR></span><span2471 style='mso-fareast-font-family:"Times New Roman"'>Next are the Pawley controls.<span2472 class=MsoHyperlink><spanstyle='color:windowtext'><o:p></o:p></span></span></span></p>2473 2474 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2306 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 2307 </span></span></span></span><![endif]><span style='mso-fareast-font-family: 2308 "Times New Roman"'>Next are the Pawley controls.<span class=MsoHyperlink><span 2309 style='color:windowtext'><o:p></o:p></span></span></span></p> 2310 2311 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2475 2312 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2476 2313 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2477 2314 color:windowtext;text-decoration:none;text-underline:none'><span 2478 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2479 </span></span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 2480 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Do Pawley 2481 refinement?</span></b><span style='mso-fareast-font-family:"Times New Roman"'> 2482 – This must be chosen to perform a Pawley refinement as opposed to a Rietveld 2483 refinement for this phase. <b style='mso-bidi-font-weight:normal'>NB:</b> you 2484 probably should clear the <b style='mso-bidi-font-weight:normal'>Histogram 2485 scale factor</b> refinement flag (found in <b style='mso-bidi-font-weight:normal'>Sample 2486 parameters</b> for the powder data set) as it cannot be refined simultaneously 2487 with the Pawley reflection intensities.<span class=MsoHyperlink><span 2488 style='color:windowtext'><o:p></o:p></span></span></span></p> 2489 2490 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2315 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2316 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2317 style='mso-fareast-font-family:"Times New Roman"'>Do Pawley refinement?</span></b><span 2318 style='mso-fareast-font-family:"Times New Roman"'> – This must be chosen to 2319 perform a Pawley refinement as opposed to a Rietveld refinement for this phase. 2320 <b style='mso-bidi-font-weight:normal'>NB:</b> you probably should clear the <b 2321 style='mso-bidi-font-weight:normal'>Histogram scale factor</b> refinement flag 2322 (found in <b style='mso-bidi-font-weight:normal'>Sample parameters</b> for the 2323 powder data set) as it cannot be refined simultaneously with the Pawley 2324 reflection intensities.<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2325 2326 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2491 2327 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2492 2328 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2493 2329 color:windowtext;text-decoration:none;text-underline:none'><span 2494 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2495 </span></span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 2496 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Pawley <span 2497 class=SpellE>dmin</span></span></b><span style='mso-fareast-font-family:"Times New Roman"'> 2498 – This is the minimum d-spacing to be used in a Pawley refinement. <b 2499 style='mso-bidi-font-weight:normal'>NB:</b> be sure to set this to match the 2500 minimum d-spacing indicated by the powder pattern limits (see <b 2501 style='mso-bidi-font-weight:normal'>Limits</b> for the powder data set).<span 2502 class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2503 2504 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2330 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2331 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2332 style='mso-fareast-font-family:"Times New Roman"'>Pawley <span class=SpellE>dmin</span></span></b><span 2333 style='mso-fareast-font-family:"Times New Roman"'> – This is the minimum 2334 d-spacing to be used in a Pawley refinement. <b style='mso-bidi-font-weight: 2335 normal'>NB:</b> be sure to set this to match the minimum d-spacing indicated by 2336 the powder pattern limits (see <b style='mso-bidi-font-weight:normal'>Limits</b> 2337 for the powder data set).<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2338 2339 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2505 2340 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2506 2341 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2507 2342 color:windowtext;text-decoration:none;text-underline:none'><span 2508 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2509 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2510 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Pawley neg. wt.</span></b><span2343 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2344 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2345 style='mso-fareast-font-family:"Times New Roman"'>Pawley neg. wt.</span></b><span 2511 2346 style='mso-fareast-font-family:"Times New Roman"'> – This is the weight for a 2512 2347 penalty function applied during a Pawley refinement on resulting negative 2513 intensities. Use with caution; initially try very small values (<span 2514 class=GramE>e.g.</span> .01). A value of zero means no penalty is applied.<span 2515 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 2516 text-underline:none'><o:p></o:p></span></span></span></p> 2517 2518 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 2348 intensities. Use with caution; initially try very small values (e.g. .01). A 2349 value of zero means no penalty is applied.<span class=MsoHyperlink><span 2350 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p> 2351 2352 <p class=MsoListParagraphCxSpMiddle style='margin-left:73.2pt;mso-add-space: 2519 2353 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2520 2354 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2521 2355 color:windowtext;text-decoration:none;text-underline:none'><span 2522 style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 2523 </span></span></span></span><![endif]><span dir=LTR></span><span2524 style='mso-fareast-font-family:"Times New Roman"'>Fourier map controls are 2525 shown next on the General page. A completed Rietveld or Pawley refinement is 2526 required before a Fourier map can be computed. Select the desired type of map, 2527 the source of the reflection set and the map resolution desired. The peak 2528 cutoff is defined as a percentage of the maximum and defines the lowest level 2529 consideredin the peak search.<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p>2530 2531 <p class=MsoListParagraphCxSpMiddle style='margin-left: 1.0in;mso-add-space:2356 style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 2357 </span></span></span></span><![endif]><span style='mso-fareast-font-family: 2358 "Times New Roman"'>Fourier map controls are shown next on the General page. 2359 Single crystal data or a completed Rietveld or Pawley refinement is required 2360 before a Fourier map can be computed. Select the desired type of map, the 2361 source of the reflection set and the map resolution desired. The peak cutoff is 2362 defined as a percentage of the maximum and defines the lowest level considered 2363 in the peak search.<span class=MsoHyperlink><span style='color:windowtext'><o:p></o:p></span></span></span></p> 2364 2365 <p class=MsoListParagraphCxSpMiddle style='margin-left:73.2pt;mso-add-space: 2532 2366 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2533 2367 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2534 2368 color:windowtext;text-decoration:none;text-underline:none'><span 2535 style='mso-list:Ignore'>6.<span style='font:7.0pt "Times New Roman"'> 2536 </span></span></span></span><![endif]><span dir=LTR></span><span2537 style='mso-fareast-font-family:"Times New Roman"'>Charge flip controls are 2538 below the Fourier map controls.<span class=MsoHyperlink><span style='color: 2539 windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p>2540 2541 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2369 style='mso-list:Ignore'>6.<span style='font:7.0pt "Times New Roman"'> 2370 </span></span></span></span><![endif]><span style='mso-fareast-font-family: 2371 "Times New Roman"'>Charge flip controls are below the Fourier map controls.<span 2372 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 2373 text-underline:none'><o:p></o:p></span></span></span></p> 2374 2375 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2542 2376 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2543 2377 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2544 2378 color:windowtext;text-decoration:none;text-underline:none'><span 2545 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2546 </span></span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 2547 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Reflection set 2548 from</span></b><span style='mso-fareast-font-family:"Times New Roman"'> – This 2549 is the source of structure factors to be used in a charge flip calculation. 2550 These may be either a single crystal data set, or structure factors extracted 2551 from a powder pattern via a Pawley refinement or a Rietveld refinement.<span 2552 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 2553 text-underline:none'><o:p></o:p></span></span></span></p> 2554 2555 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2379 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2380 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2381 style='mso-fareast-font-family:"Times New Roman"'>Reflection sets </span></b><span 2382 style='mso-fareast-font-family:"Times New Roman"'>– This is the source of 2383 structure factors to be used in a charge flip calculation. These may be either 2384 a single crystal data set, or structure factors extracted from a powder pattern 2385 via a Pawley refinement or a Rietveld refinement.<span class=MsoHyperlink><span 2386 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p> 2387 2388 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2556 2389 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2557 2390 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2558 2391 color:windowtext;text-decoration:none;text-underline:none'><span 2559 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2560 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2561 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Normalizing 2562 element </span></b><span style='mso-fareast-font-family:"Times New Roman"'>– 2563 This is an element form factor chosen to normalize the structure factors before 2564 charge flipping. <b style='mso-bidi-font-weight:normal'>None</b> (the default) 2565 can be selected from the lower right of the Periodic Table display shown when2566 this is selected.<span class=MsoHyperlink><span style='color:windowtext;2567 text- decoration:none;text-underline:none'><o:p></o:p></span></span></span></p>2568 2569 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2392 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2393 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2394 style='mso-fareast-font-family:"Times New Roman"'>Normalizing element </span></b><span 2395 style='mso-fareast-font-family:"Times New Roman"'>– This is an element form 2396 factor chosen to normalize the structure factors before charge flipping. <b 2397 style='mso-bidi-font-weight:normal'>None</b> (the default) can be selected from 2398 the lower right of the Periodic Table display shown when this is selected.<span 2399 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 2400 text-underline:none'><o:p></o:p></span></span></span></p> 2401 2402 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2570 2403 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2571 2404 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2572 2405 color:windowtext;text-decoration:none;text-underline:none'><span 2573 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2574 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:2575 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Resolution</span></b><span2576 style='mso-fareast-font-family:"Times New Roman"'>– This is the resolution of2577 the charge flip map; default is 0.5A. The set of reflections is expanded to a 2578 full sphere and zero filled to this resolution limit; this suite of reflections 2579 is then used for charge flipping.<span class=MsoHyperlink><span 2580 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p>2581 2582 <p class=MsoListParagraphCxSpMiddle style='margin-left:1 .5in;mso-add-space:2406 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2407 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2408 style='mso-fareast-font-family:"Times New Roman"'>Map grid step </span></b><span 2409 style='mso-fareast-font-family:"Times New Roman"'>– This is the step size of the 2410 charge flip map; default is 0.25A. The set of reflections is expanded to a full 2411 sphere and zero filled to this 2X this value; this suite of reflections is then 2412 used for charge flipping.<span class=MsoHyperlink><span style='color:windowtext; 2413 text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p> 2414 2415 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2583 2416 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2584 2417 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 2585 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2586 dir=LTR></span><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 2587 "Times New Roman"'>k-Factor</span></b><span style='mso-fareast-font-family: 2588 "Times New Roman"'> – This is the threshold on the density map, all densities 2589 below this are charge flipped.</span></p> 2590 2591 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2418 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2419 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>k-Factor</span></b><span 2420 style='mso-fareast-font-family:"Times New Roman"'> – This is the threshold on 2421 the density map, all densities below this are charge flipped.</span></p> 2422 2423 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2592 2424 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2593 2425 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 2594 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2595 dir=LTR></span><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 2596 "Times New Roman"'>k-Max</span></b><span style='mso-fareast-font-family:"Times New Roman"'> 2597 – This is an upper threshold on the density may; all densities above this are 2598 charge flipped. In this way the “uranium solution” problem is avoided. Use 2599 k-Max = 10-12 for equal atom problems and larger for heavy atom ones.<o:p></o:p></span></p> 2600 2601 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 2426 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2427 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>k-Max</span></b><span 2428 style='mso-fareast-font-family:"Times New Roman"'> – This is an upper threshold 2429 on the density map; all densities above this are charge flipped. In this way 2430 the “uranium solution” problem is avoided. Use k-Max = 10-12 for equal atom 2431 problems and larger for heavy atom ones (2X largest atom number).<o:p></o:p></span></p> 2432 2433 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2434 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2435 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>f.<span 2436 style='font:7.0pt "Times New Roman"'> 2437 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2438 style='mso-fareast-font-family:"Times New Roman"'>Test HKLs</span></b><span 2439 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'> – 2440 plot of phases for selected <span class=SpellE>hkls</span> are shown at end of 2441 charge flipping run.</span><span style='mso-fareast-font-family:"Times New Roman"'><o:p></o:p></span></p> 2442 2443 <p class=MsoListParagraphCxSpMiddle style='margin-left:73.2pt;mso-add-space: 2602 2444 auto;text-indent:-.25in;mso-list:l0 level1 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2603 2445 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>7.<span 2604 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2605 dir=LTR></span><span style='mso-fareast-font-family:"Times New Roman"'>Monte 2606 Carlo/Simulated Annealing controls are at the bottom of the window. (Future 2607 capability & under development).<o:p></o:p></span></p> 2608 2609 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2446 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2447 style='mso-fareast-font-family:"Times New Roman"'>Monte Carlo/Simulated 2448 Annealing controls are at the bottom of the window. <o:p></o:p></span></p> 2449 2450 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2610 2451 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2611 2452 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 2612 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2613 dir=LTR></span><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 2614 "Times New Roman"'>Reflection set from</span></b><span style='mso-fareast-font-family: 2615 "Times New Roman"'> – This is the source of structure factors to be used in a 2616 charge flip calculation. These may be either a single crystal data set, or 2617 structure factors extracted from a powder pattern via a Pawley refinement or a 2618 Rietveld refinement.<o:p></o:p></span></p> 2619 2620 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2453 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2454 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>Reflection 2455 set from</span></b><span style='mso-fareast-font-family:"Times New Roman"'> – 2456 This is the source of structure factors to be used in a charge flip 2457 calculation. These may be either a single crystal data set, or structure 2458 factors extracted from a powder pattern via a Pawley refinement or a Rietveld 2459 refinement.<o:p></o:p></span></p> 2460 2461 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2462 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2463 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 2464 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2465 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>d-min 2466 </span></b><span style='mso-fareast-font-family:"Times New Roman"'>- This 2467 restricts the set of reflections to be used in the MC/SA run. Suggest no lower 2468 than 2.0.</span></p> 2469 2470 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2471 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2472 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 2473 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 2474 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>MC/SA 2475 runs</span></b><span style='mso-fareast-font-family:"Times New Roman"; 2476 mso-bidi-font-weight:bold'> – pulldown with selection of number of trials to be 2477 done.</span></p> 2478 2479 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2621 2480 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2622 2481 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2623 2482 color:windowtext;text-decoration:none;text-underline:none'><span 2624 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2625 </span></span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 2626 normal'><span style='mso-fareast-font-family:"Times New Roman"'>d-min </span></b><span 2627 style='mso-fareast-font-family:"Times New Roman"'>- This restricts the set of 2628 reflections to be used in the MC/SA run.</span><span class=MsoHyperlink><span 2629 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></p> 2630 2631 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2483 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 2484 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2485 style='mso-fareast-font-family:"Times New Roman"'>MC/SA Refine</span></b><span 2486 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'> – 2487 requires a refinement of parameters over range about each test position.</span><span 2488 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 2489 text-underline:none'><o:p></o:p></span></span></p> 2490 2491 <p class=MsoListParagraphCxSpMiddle style='margin-left:121.5pt;mso-add-space: 2632 2492 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2633 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'> c.<span2634 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span2635 dir=LTR></span><spanclass=MsoHyperlink><b style='mso-bidi-font-weight:normal'><span2493 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 2494 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2495 class=MsoHyperlink><b style='mso-bidi-font-weight:normal'><span 2636 2496 style='mso-fareast-font-family:"Times New Roman";color:windowtext;text-decoration: 2637 none;text-underline:none'>MC/SA algorithm</span></b></span><span2497 none;text-underline:none'>MC/SA schedule</span></b></span><span 2638 2498 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2639 2499 color:windowtext;text-decoration:none;text-underline:none'> – This selects the 2640 type of jump to be used for each MC/SA trial.</span></span></p> 2641 2642 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2500 schedule for the “temperature” to be used during MC/SA run. For ‘fast’ and 2501 ‘log’, coefficients control details of schedule; a plot shows the scheduled 2502 temperatures for the set of steps.</span></span></p> 2503 2504 <p class=MsoListParagraphCxSpLast style='margin-left:121.5pt;mso-add-space: 2643 2505 auto;text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2644 2506 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2645 2507 color:windowtext;text-decoration:none;text-underline:none'><span 2646 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 2647 </span></span></span></span><![endif]><span dir=LTR></span><span 2648 class=MsoHyperlink><b style='mso-bidi-font-weight:normal'><span 2649 style='mso-fareast-font-family:"Times New Roman";color:windowtext;text-decoration: 2650 none;text-underline:none'>Annealing schedule</span></b></span><span 2508 style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 2509 </span></span></span></span><![endif]><span class=MsoHyperlink><b 2510 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"; 2511 color:windowtext;text-decoration:none;text-underline:none'>Annealing schedule</span></b></span><span 2651 2512 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2652 2513 color:windowtext;text-decoration:none;text-underline:none'> – This selects the 2653 beginning MC/SA “temperature”, final “temperature”, slope and number of trials 2654 at each step.<o:p></o:p></span></span></p> 2655 2656 <p class=MsoListParagraphCxSpLast style='margin-left:1.5in;mso-add-space:auto; 2657 text-indent:-.25in;mso-list:l0 level2 lfo2;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 2658 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2659 color:windowtext;text-decoration:none;text-underline:none'><span 2660 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 2661 </span></span></span></span><![endif]><span dir=LTR></span><span 2662 class=MsoHyperlink><b style='mso-bidi-font-weight:normal'><span 2663 style='mso-fareast-font-family:"Times New Roman";color:windowtext;text-decoration: 2664 none;text-underline:none'>A-jump & B-jump</span></b></span><span 2665 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2666 color:windowtext;text-decoration:none;text-underline:none'> – If the “<span 2667 class=SpellE>Tremayne</span>” algorithm is chosen these determine the jump 2668 components for each trial.<o:p></o:p></span></span></p> 2514 beginning MC/SA “temperature”, final “temperature”, and number of trials at 2515 each step.<o:p></o:p></span></span></p> 2669 2516 2670 2517 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a … … 2680 2527 point in the structure does not contain a center of symmetry. Origin 1 places 2681 2528 the origin at the highest symmetry setting while Origin 2 places the origin at 2682 a center of symmetry (creating a -<span class=GramE>x,-</span>y,-z symmetry 2683 operator, which means that reflection phases can only be 0 or π.) GSAS-II 2684 requires use of the Origin 2 settings because computations are much faster and 2685 simpler without complex structure factors. Alas, the literature contains <span 2686 class=GramE>a number of</span> structures reported in Origin 1, where the 2687 origin choice may not be clearly communicated. (The CIF standard does not 2688 require that origin choice be indicated.) When a structure is imported that 2689 uses any of the space groups where an origin choice is possible, a message is 2690 shown in GSAS-II notifying the user that they must confirm that the origin 2691 choice is correct. <o:p></o:p></span></p> 2529 a center of symmetry (creating a -x,-y,-z symmetry operator, which means that 2530 reflection phases can only be 0 or π.) GSAS-II requires use of the Origin 2 2531 settings because computations are much faster and simpler without complex 2532 structure factors. Alas, the literature contains a number of structures 2533 reported in Origin 1, where the origin choice may not be clearly communicated. 2534 (The CIF standard does not require that origin choice be indicated.) When a 2535 structure is imported that uses any of the space groups where an origin choice 2536 is possible, a message is shown in GSAS-II notifying the user that they must 2537 confirm that the origin choice is correct. <o:p></o:p></span></p> 2692 2538 2693 2539 <p class=MsoNormal style='margin-left:1.0in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span 2694 2540 style='mso-fareast-font-family:"Times New Roman"'>Example:</span></b><span 2695 style='mso-fareast-font-family:"Times New Roman"'> An example of what can go 2696 wrong is illustrated with the structure of anatase. The space group is <i>I</i> 2697 4<sub>1</sub>/<i>am d</i>. In Origin 1 the coordinates are: <o:p></o:p></span></p>2541 style='mso-fareast-font-family:"Times New Roman"'> An example of what can go wrong 2542 is illustrated with the structure of anatase. The space group is <i>I</i> 4<sub>1</sub>/<i>a 2543 m d</i>. In Origin 1 the coordinates are: <o:p></o:p></span></p> 2698 2544 2699 2545 <table class=MsoNormalTable border=0 cellpadding=0 style='mso-cellspacing:1.5pt; … … 2818 2664 <v:imagedata src="gsasII_files/wrong.png"/> 2819 2665 <w:wrap type="square" anchory="line"/> 2820 </v:shape><![endif]--><![if !vml]><img width= 241 height=1432666 </v:shape><![endif]--><![if !vml]><img width=322 height=190 2821 2667 src="gsasII_files/wrong.png" align=right v:shapes="Picture_x0020_3"><![endif]><span 2822 style='mso-fareast-font-family:"Times New Roman"'>Since GSAS-II always the 2823 symmetry operators for Origin 2, if structure is input incorrectly with the coordinates 2824 set for Origin 1, there are several <span class=GramE>fairly obvious</span> 2825 signs of problems: (1) the site symmetries and multiplicities are wrong, often 2826 giving an incorrect chemical formula, (2) the interatomic distances are 2827 incorrect, and (3) a plot of the structure is improbable. In this case 2828 incorrect multiplicities gives rise to a density of 7.9 g/cc, double the 2829 correct value. Impossible interatomic distances of 1.88Å for <span 2830 class=SpellE><span class=GramE>Ti-Ti</span></span>, and 1.39Å for <span 2668 style='mso-fareast-font-family:"Times New Roman"'>Since GSAS-II always the symmetry 2669 operators for Origin 2, if structure is input incorrectly with the coordinates 2670 set for Origin 1, there are several fairly obvious signs of problems: (1) the 2671 site symmetries and multiplicities are wrong, often giving an incorrect 2672 chemical formula, (2) the interatomic distances are incorrect, and (3) a plot 2673 of the structure is improbable. In this case incorrect multiplicities gives 2674 rise to a density of 7.9 g/cc, double the correct value. Impossible interatomic 2675 distances of 1.88Å for <span class=SpellE>Ti-Ti</span>, and 1.39Å for <span 2831 2676 class=SpellE>Ti</span>-O are seen. The unit cell contents with the wrong space 2832 group operators <span class=GramE>is</span>shown to the right. <o:p></o:p></span></p>2677 group operators is shown to the right. <o:p></o:p></span></p> 2833 2678 2834 2679 <p class=MsoNormal style='margin-left:1.0in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 2852 2697 <v:imagedata src="gsasII_files/xform.png"/> 2853 2698 <w:wrap type="square" anchory="line"/> 2854 </v:shape><![endif]--><![if !vml]><img width= 273 height=3402699 </v:shape><![endif]--><![if !vml]><img width=364 height=453 2855 2700 src="gsasII_files/xform.png" align=right v:shapes="Picture_x0020_4"><![endif]><b><span 2856 2701 style='mso-fareast-font-family:"Times New Roman"'>Transform Origin:</span></b><span 2857 2702 style='mso-fareast-font-family:"Times New Roman"'> To transform a space group 2858 setting from Origin setting 1 to 2, use the Transform option in the Compute 2859 menuand then select the last option in the "Common transformations"2703 setting from Origin setting 1 to 2, use the Transform option in the Compute menu 2704 and then select the last option in the "Common transformations" 2860 2705 pulldown menu, which will be setting 1->2 for space groups where both 2861 2706 origins are available, as shown to the right. The transformation matrix will be … … 2871 2716 name=Phase-Data></a><a name="_Data"></a><u>Data</u></h4> 2872 2717 2873 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span2874 style='mso-fareast-font-family:"Times New Roman"'>Depending on the setting for2875 preference variable </span><span class=SpellE><span style='font-family:"Calibri",sans-serif;2876 mso-ascii-theme-font:minor-latin;mso-fareast-font-family:"Times New Roman";2877 mso-hansi-theme-font:minor-latin;mso-bidi-theme-font:minor-latin'>SeparateHistPhaseTreeItem</span></span><span2878 style='mso-fareast-font-family:"Times New Roman"'>, these items may be2879 displayed connected to data tree item “Hist/Phase” or may appear in the Data2880 tab for each phase.<o:p></o:p></span></p>2881 2882 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span2883 style='mso-fareast-font-family:"Times New Roman"'><o:p> </o:p></span></p>2884 2885 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span2886 style='mso-fareast-font-family:"Times New Roman"'>Note that GSAS-II has four2887 types of controls/parameters: <o:p></o:p></span></p>2888 2889 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto;2890 text-indent:-.25in;mso-list:l2 level1 lfo23;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2891 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family:2892 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 2893 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:2894 "Times New Roman"'>Global: affects overall program function</span></p>2895 2896 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space:2897 auto;text-indent:-.25in;mso-list:l2 level1 lfo23;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2898 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family:2899 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 2900 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:2901 "Times New Roman"'>Phase: includes atoms, lattice parameters, texture… </span></p>2902 2903 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space:2904 auto;text-indent:-.25in;mso-list:l2 level1 lfo23;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2905 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family:2906 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 2907 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:2908 "Times New Roman"'>Histogram: includes instrument & sample parameters, data2909 limits</span></p>2910 2911 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space:2912 auto;text-indent:-.25in;mso-list:l2 level1 lfo23;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2913 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family:2914 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 2915 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:2916 "Times New Roman"'>Histogram/Phase. This controls which histograms are2917 connected to each phase as well as specifies phase fractions, for powders:2918 crystallite size, <span class=SpellE>microstrain</span>, preferred orientation,2919 etc. If there are N used phases and M used histograms, there are N*M sets of Histogram/Phase2920 controls/parameters.</span></p>2921 2922 <p class=MsoListParagraphCxSpLast style='margin-left:1.0in;mso-add-space:auto;2923 tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><o:p> </o:p></p>2924 2925 2718 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>This 2926 GUI section serves several purposes. It is used to link histograms to the 2927 selected <span class=GramE>phase</span> and it allows the values and refinement 2928 flags to be set for the parameters that are defined for each histogram-phase 2929 pair, including: the phase fraction; the sample contribution to peak 2930 broadening: <span class=SpellE>microstrain</span> and crystallite size; a <span 2931 class=SpellE>LeBail</span> intensity extraction flag; hydrostatic/elastic 2932 strain shifts to lattice parameters; corrections to peak intensities due to 2933 experimental effects (preferred orientation, extinction and disordered 2934 solvents). It can also be used to show a graphical representation of an HAP 2935 parameter set.</p> 2936 2937 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><o:p> </o:p></p> 2719 tab serves several purposes. It is used to link histograms to the selected <span 2720 class=GramE>phase</span> and it allows the values and refinement flags to be 2721 set for the parameters that are defined for each histogram-phase pair, labeled 2722 as HAP parameters. [Note that some GSAS-II parameters are defined for each 2723 phase (atomic positions, for example), other parameters are defined for each 2724 histogram (scale factors and instrumental constants, for example) but the HAP 2725 parameters have values for each histogram in each phase.] It can also be used 2726 to show a graphical representation of an HAP parameter set.</p> 2727 2728 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>The 2729 HAP parameters include: the phase fraction; the sample contribution to peak 2730 broadening: <span class=SpellE>microstrain</span> and crystallite size; a 2731 LeBail intensity extraction flag; hydrostatic/elastic strain shifts to lattice 2732 parameters; corrections to peak intensities due to experimental effects 2733 (preferred orientation, extinction and disordered solvents).</p> 2938 2734 2939 2735 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>For 2940 2736 single crystal data, the only parameters are scale, extinction and disordered 2941 solvent; there is no Sample Parameters histogram scale factor.</p> 2942 2943 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><o:p> </o:p></p> 2737 solvent. There is no Sample Parameters histogram scale factor.</p> 2944 2738 2945 2739 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span … … 2950 2744 style='mso-fareast-font-family:"Times New Roman"'>When the Use flag is 2951 2745 selected, the currently selected phase is used to compute intensities as a 2952 contribution to the selected histogram (single-crystal histograms can be 2953 associated with only one phase; powder histograms can be linked to any number 2954 of phases). When not set, the phase is not present in the selected histogram. It 2955 is also possible to remove the reference to a histogram from a phase with the “Remove 2956 Histogram” item in the “Edit Phase” menu. <o:p></o:p></span></p> 2957 2958 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2959 class=SpellE><b><span style='mso-fareast-font-family:"Times New Roman"'>LeBail</span></b></span><b><span 2960 style='mso-fareast-font-family:"Times New Roman"'> extraction </span></b><span 2746 contribution to the selected histogram (single-crystal histograms can have only 2747 one phase; powder histograms can have any number of associated phases). When 2748 not set, the phase is not present in the selected histogram. <o:p></o:p></span></p> 2749 2750 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span 2751 style='mso-fareast-font-family:"Times New Roman"'>LeBail extraction </span></b><span 2961 2752 style='mso-fareast-font-family:"Times New Roman"'><o:p></o:p></span></p> 2962 2753 … … 2964 2755 style='mso-fareast-font-family:"Times New Roman"'>When this is selected, 2965 2756 intensities are set to values that are <span class=GramE>best-fit</span> using 2966 the <span class=SpellE>LeBail</span> intensity determination method, rather 2967 than are computed from the atomic information for the phase. Cycling this 2968 setting will reset <span class=SpellE>LeBail</span> extracted intensities to 2969 their default (F<sup>2</sup> = 100).<o:p></o:p></span></p> 2757 the LeBail intensity determination method rather than are computed from the 2758 atomic information for the phase. Cycling this setting will reset LeBail 2759 extracted intensities to their default (F<sup>2</sup> = 100).<o:p></o:p></span></p> 2970 2760 2971 2761 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span … … 2974 2764 2975 2765 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2976 style='mso-fareast-font-family:"Times New Roman"'> Used in powder histograms: a2766 style='mso-fareast-font-family:"Times New Roman"'>used in powder histograms: a 2977 2767 multiplier that determines the relative amount of the selected phase to a 2978 2768 histogram. Note that when the histogram scale factor is varied, these values … … 2986 2776 2987 2777 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2988 style='mso-fareast-font-family:"Times New Roman"'> Used for single crystal data2989 only:relates F<sup>2</sup><sub>obs</sub> to F<sup>2</sup><sub>calc</sub>.<o:p></o:p></span></p>2778 style='mso-fareast-font-family:"Times New Roman"'>used for single crystal <span 2779 class=GramE>data:</span> relates F<sup>2</sup><sub>obs</sub> to F<sup>2</sup><sub>calc</sub>.<o:p></o:p></span></p> 2990 2780 2991 2781 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span … … 2994 2784 2995 2785 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 2996 style='mso-fareast-font-family:"Times New Roman"'> Is computed from size2786 style='mso-fareast-font-family:"Times New Roman"'>is computed from size 2997 2787 factor(s) in microns (10<sup>-6</sup> m), with the Scherrer constant assumed as 2998 2788 unity. Sizes can be computed in three ways: isotropic, uniaxial and 2999 ellipsoidal. <o:p></o:p></span></p> 3000 3001 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 3002 text-indent:-.25in;mso-list:l4 level1 lfo24;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3003 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3004 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3005 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family: 3006 "Times New Roman"'>In isotropic broadening, crystallites are assumed to average 3007 as uniform in all directions and a single size value is <span class=GramE>supplied;</span> 3008 <o:p></o:p></span></p> 3009 3010 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3011 auto;text-indent:-.25in;mso-list:l4 level1 lfo24;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3012 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3013 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3014 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family: 3015 "Times New Roman"'>With uniaxial broadening, a preferred direction (as a 3016 crystallographic axis, such as 0,0,1 is supplied) -- note that for most crystal 3017 systems only one axis makes sense -- and two size parameters are defined, one for 3018 along the axis and one for in the perpendicular <span class=GramE>plane;</span> 3019 <o:p></o:p></span></p> 3020 3021 <p class=MsoListParagraphCxSpLast style='margin-left:1.0in;mso-add-space:auto; 3022 text-indent:-.25in;mso-list:l4 level1 lfo24;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3023 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3024 Symbol;mso-bidi-font-weight:bold'><span style='mso-list:Ignore'>·<span 3025 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3026 dir=LTR></span><span style='mso-fareast-font-family:"Times New Roman"'>With 3027 ellipsoidal, six terms are used to define a broadening tensor that has 3028 arbitrary orientation -- this model may require constraints and is seldomly 3029 needed.<b><o:p></o:p></b></span></p> 3030 3031 <p class=MsoNormal style='margin-left:.75in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 3032 class=SpellE><b><span style='mso-fareast-font-family:"Times New Roman"'>LGmix</span></b></span><span 3033 style='mso-fareast-font-family:"Times New Roman"'>: Note that size broadening 3034 is usually Lorentzian, which corresponds to a <span class=SpellE>LGmix</span> 3035 value of 1.0; if this value is between 0. and 1., both Gaussian and Lorentz 3036 size broadening is modeled and a value of 0.0 is pure Gaussian. Values less 3037 than 0. or greater than 1. make no physical sense. <o:p></o:p></span></p> 2789 ellipsoidal. In isotropic broadening, crystallites are assumed to average as 2790 uniform in all directions and a single size value is supplied; with uniaxial 2791 broadening, a preferred direction (as a crystallographic axis, such as 0,0,1 is 2792 supplied) -- note that for most crystal systems only one axis makes sense -- 2793 and two size parameters are defined, one for along the axis and one for in the 2794 perpendicular plane; with ellipsoidal, six terms are used to define a 2795 broadening tensor that has arbitrary orientation -- this model may require 2796 constraints and is seldomly needed. Note that size broadening is usually 2797 Lorentzian, which corresponds to a <span class=SpellE>LGmix</span> value of 2798 1.0; if this value is between 0. and 1., both Gaussian and Lorentz size 2799 broadening is modeled and a value of 0.0 is pure Gaussian. Values less than 0. 2800 or greater than 1. make no physical sense. <o:p></o:p></span></p> 3038 2801 3039 2802 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 3046 2809 fraction of <span class=SpellE>Δd</span>/d (or equivalently ΔQ/Q) times 10<sup>6</sup>. 3047 2810 <span class=SpellE>Microstrain</span> can be computed in three ways: isotropic, 3048 uniaxial and generalized. <o:p></o:p></span></p> 3049 3050 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 3051 text-indent:-.25in;mso-list:l5 level1 lfo25;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3052 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3053 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3054 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family: 3055 "Times New Roman"'>In isotropic broadening, <span class=SpellE>microstrain</span> 2811 uniaxial and generalized. In isotropic broadening, <span class=SpellE>microstrain</span> 3056 2812 broadening assumed to be the same in all crystallographic directions and a 3057 single value is <span class=GramE>supplied;</span> <o:p></o:p></span></p> 3058 3059 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3060 auto;text-indent:-.25in;mso-list:l5 level1 lfo25;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3061 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3062 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3063 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family: 3064 "Times New Roman"'>With uniaxial broadening, a preferred direction (as a 2813 single value is supplied; with uniaxial broadening, a preferred direction (as a 3065 2814 crystallographic axis, such as 0,0,1) is supplied -- note that for most crystal 3066 2815 systems only one axis makes sense -- and two <span class=SpellE>microstrain</span> 3067 2816 parameters are defined, one for along the axis and one for in the perpendicular 3068 <span class=GramE>plane;</span> <o:p></o:p></span></p> 3069 3070 <p class=MsoListParagraphCxSpLast style='margin-left:1.0in;mso-add-space:auto; 3071 text-indent:-.25in;mso-list:l5 level1 lfo25;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3072 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3073 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3074 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family: 3075 "Times New Roman"'>With generalized, the Nicolae Popa/Peter Stephens 3076 second-order expansion model is <span class=GramE>used</span> and the number of 3077 terms will depend on the crystal system. It is typically possible to refine all 3078 terms when significant anisotropic strain broadening is present. <o:p></o:p></span></p> 3079 3080 <p class=MsoNormal style='margin-left:.75in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 3081 class=SpellE><b><span style='mso-fareast-font-family:"Times New Roman"'>LGmix</span></b></span><span 3082 style='mso-fareast-font-family:"Times New Roman"'>: Note that <span 3083 class=SpellE>microstrain</span> broadening is usually Lorentzian, which 3084 corresponds to a <span class=SpellE>LGmix</span> value of 1.0; if this value is 3085 between 0. and 1., both Gaussian and Lorentz broadening is modeled and a value 3086 of 0.0 is pure Gaussian. Values less than 0. or greater than 1. make no 3087 physical sense. <o:p></o:p></span></p> 2817 plane; with generalized, the Nicole Popa/Peter Stephens second-order expansion 2818 model is used and the number of terms will depend on the crystal system. It is 2819 typically possible to refine all terms when significant anisotropic strain 2820 broadening is present. Note that <span class=SpellE>microstrain</span> 2821 broadening is usually Lorentzian, which corresponds to a <span class=SpellE>LGmix</span> 2822 value of 1.0; if this value is between 0. and 1., both Gaussian and Lorentz 2823 broadening is modeled and a value of 0.0 is pure Gaussian. Values less than 0. 2824 or greater than 1. make no physical sense. <o:p></o:p></span></p> 3088 2825 3089 2826 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><b><span … … 3107 2844 3108 2845 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 3109 style='mso-fareast-font-family:"Times New Roman"'>is treated in one of two ways.3110 Intensity corrections can be added to the model here or a full texture model is 3111 possible with the "<u><span style='color:blue'><a href="#Texture">Texture</a></span></u>"2846 style='mso-fareast-font-family:"Times New Roman"'>is treated in one of two 2847 ways. Intensity corrections can be added to the model here or a full texture 2848 model is possible with the "<u><span style='color:blue'><a href="#Texture">Texture</a></span></u>" 3112 2849 tab (which usually requires multiple histograms at different sample or detector 3113 2850 settings). The approaches available here are March-<span class=SpellE>Dollase</span>, 3114 2851 which requires a definition of a unique axis (in crystallographic coordinates) 3115 2852 and the relative amount of excess or depletion of crystallites in that 3116 direction; or Spherical Harmonics, where the selection of an order determines the3117 shape of the probability surface (which is always constrained to match the2853 direction; or Spherical Harmonics, where the selection of an order determines 2854 the shape of the probability surface (which is always constrained to match the 3118 2855 symmetry of the crystal system). <o:p></o:p></span></p> 3119 2856 … … 3155 2892 3156 2893 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; 3157 margin-left:.5in;text-indent:-.25in;mso-list:l 12level1 lfo4;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2894 margin-left:.5in;text-indent:-.25in;mso-list:l9 level1 lfo4;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3158 2895 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 3159 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3160 dir=LTR></span><span style='mso-fareast-font-family:"Times New Roman"'>In this 3161 tab, menu items allow copying values or refinement flags to histograms/phases 3162 and selection of whichhistograms are used in the current phase. <o:p></o:p></span></p>2896 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2897 style='mso-fareast-font-family:"Times New Roman"'>In this tab, menu items allow 2898 copying values or refinement flags to histograms/phases and selection of which 2899 histograms are used in the current phase. <o:p></o:p></span></p> 3163 2900 3164 2901 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; 3165 margin-left:.5in;text-indent:-.25in;mso-list:l 12level1 lfo4;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2902 margin-left:.5in;text-indent:-.25in;mso-list:l9 level1 lfo4;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3166 2903 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>2.<span 3167 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3168 dir=LTR></span><span style='mso-fareast-font-family:"Times New Roman"'>The plot 3169 selection items allow for three dimensional representations of the <span 3170 class=SpellE>microstrain</span> or crystallite size distributions (which are 3171 spheres for isotropic treatments); preferred orientation can be plotted as a 3172 Psi scan (a plot of relative crystallite abundance for a particular reflection 3173 a s a function of azimuthal angle) or as an inverse pole figure (which shows in3174 a stereographic projection the probability distribution for different 3175 reciprocal lattice directions for aparticular sample orientation). <o:p></o:p></span></p>2904 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 2905 style='mso-fareast-font-family:"Times New Roman"'>The plot selection items 2906 allow for three dimensional representations of the <span class=SpellE>microstrain</span> 2907 or crystallite size distributions (which are spheres for isotropic treatments); 2908 preferred orientation can be plotted as a Psi scan (a plot of relative 2909 crystallite abundance for a particular reflection as a function of azimuthal 2910 angle) or as an inverse pole figure (which shows in a stereographic projection 2911 the probability distribution for different reciprocal lattice directions for a 2912 particular sample orientation). <o:p></o:p></span></p> 3176 2913 3177 2914 <h4 style='margin-left:.25in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a … … 3192 2929 3193 2930 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 3194 text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2931 text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3195 2932 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 3196 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3197 dir=LTR></span>1. Atom selection from table - These are controlled by the mouse 3198 and the Shift/Ctrl/Alt keys. Note that for most purposes (one exception is atom 3199 re ordering which requires an Alt-Left-click on the rows), selection of any cell3200 for an atom will work equivalently with selection of the entire row. Upon 3201 selection the atomswill turn green in the structure drawing:</p>3202 3203 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3204 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2933 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Atom 2934 selection from table </b>- These are controlled by the mouse and the Shift/Ctrl/Alt 2935 keys. Note that for most purposes (one exception is atom reordering which 2936 requires an Alt-Left-click on the rows), selection of any cell for an atom will 2937 work equivalently with selection of the entire row. Upon selection the atoms 2938 will turn green in the structure drawing:</p> 2939 2940 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2941 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3205 2942 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3206 2943 color:windowtext;text-decoration:none;text-underline:none'><span 3207 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 3208 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3209 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Left Mouse 3210 Button (LMB)</span></b><span style='mso-fareast-font-family:"Times New Roman"'> 3211 – on a row number selects the atom.<span class=MsoHyperlink><span 3212 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p>3213 3214 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3215 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2944 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 2945 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2946 style='mso-fareast-font-family:"Times New Roman"'>Left Mouse Button (LMB)</span></b><span 2947 style='mso-fareast-font-family:"Times New Roman"'> – on a row number selects 2948 the atom.<span class=MsoHyperlink><span style='color:windowtext;text-decoration: 2949 none;text-underline:none'><o:p></o:p></span></span></span></p> 2950 2951 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 2952 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3216 2953 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3217 2954 color:windowtext;text-decoration:none;text-underline:none'><span 3218 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 3219 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3220 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Shift LMB</span></b><span3221 style='mso-fareast-font-family:"Times New Roman"'> – on a row number selects all3222 a toms from last selection to the selected row (or top is none previously2955 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 2956 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2957 style='mso-fareast-font-family:"Times New Roman"'>Shift LMB</span></b><span 2958 style='mso-fareast-font-family:"Times New Roman"'> – on a row number selects 2959 all atoms from last selection to the selected row (or top is none previously 3223 2960 selected).<span class=MsoHyperlink><span style='color:windowtext;text-decoration: 3224 2961 none;text-underline:none'><o:p></o:p></span></span></span></p> 3225 2962 3226 2963 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3227 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2964 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3228 2965 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3229 2966 color:windowtext;text-decoration:none;text-underline:none'><span 3230 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 3231 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3232 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Ctrl LMB</span></b><span2967 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 2968 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2969 style='mso-fareast-font-family:"Times New Roman"'>Ctrl LMB</span></b><span 3233 2970 style='mso-fareast-font-family:"Times New Roman"'> – on a row number 3234 2971 selects/deselects the atom.<span class=MsoHyperlink><span style='color:windowtext; … … 3236 2973 3237 2974 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3238 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2975 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3239 2976 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3240 2977 color:windowtext;text-decoration:none;text-underline:none'><span 3241 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 3242 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3243 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Alt LMB</span></b><span2978 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 2979 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 2980 style='mso-fareast-font-family:"Times New Roman"'>Alt LMB</span></b><span 3244 2981 style='mso-fareast-font-family:"Times New Roman"'> – on a row number selects 3245 that atom for moving; the status line at bottom of window will show name of atom3246 selected. Use <b style='mso-bidi-font-weight:normal'>Alt LMB</b> again to2982 that atom for moving; the status line at bottom of window will show name of 2983 atom selected. Use <b style='mso-bidi-font-weight:normal'>Alt LMB</b> again to 3247 2984 select a target row for this atom; insertion will be before this row and the 3248 2985 table will be updated to show the change. NB: <span class=GramE>the</span> <b … … 3252 2989 3253 2990 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3254 auto;text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span2991 auto;text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3255 2992 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3256 2993 color:windowtext;text-decoration:none;text-underline:none'><span 3257 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 3258 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3259 normal'>Double left click a Type column heading</b>: a dialog box is shown that 3260 allows you to select all atoms with that type. <span class=MsoHyperlink><span3261 style='mso-fareast-font-family:"Times New Roman";color:windowtext;text-decoration: 3262 none;text-underline:none'><o:p></o:p></span></span></p>2994 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 2995 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Double 2996 left <span class=GramE>click</span> a Type column heading</b>: a dialog box is 2997 shown that allows you to select all atoms with that type. <span 2998 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 2999 color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></p> 3263 3000 3264 3001 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3265 auto;text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3002 auto;text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3266 3003 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3267 3004 color:windowtext;text-decoration:none;text-underline:none'><span 3268 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 3269 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3270 normal'>Doubleclick a refine or I/A column heading</b><span style='mso-fareast-font-family:3005 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 3006 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Double 3007 click a refine or I/A column heading</b><span style='mso-fareast-font-family: 3271 3008 "Times New Roman"'>: a dialog box will be shown with choices to be applied to 3272 3009 every atom in the list.<span class=MsoHyperlink><span style='color:windowtext; … … 3274 3011 3275 3012 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3276 auto;text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3013 auto;text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3277 3014 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3278 3015 color:windowtext;text-decoration:none;text-underline:none'><span 3279 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 3280 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3281 normal'><span style='mso-fareast-font-family:"Times New Roman"'>Atom data item 3282 editing tools</span></b><span style='mso-fareast-font-family:"Times New Roman"'> 3283 – These are controlled by the mouse (<b style='mso-bidi-font-weight:normal'>Alt</b> 3284 ignored, <b style='mso-bidi-font-weight:normal'>Shift</b> & <b 3285 style='mso-bidi-font-weight:normal'>Ctrl</b> allow selection of multiple <span 3286 class=GramE>cells</span> but no use is made of them). An individual data item 3287 can be cut/pasted anywhere including from/to another document. Bad entries are 3288 rejected. If any entry is changed, press <b style='mso-bidi-font-weight:normal'>Enter</b> 3289 key or selectanother atom entry to apply the change.<span class=MsoHyperlink><span3016 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 3017 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 3018 style='mso-fareast-font-family:"Times New Roman"'>Atom data item editing tools</span></b><span 3019 style='mso-fareast-font-family:"Times New Roman"'> – These are controlled by 3020 the mouse (<b style='mso-bidi-font-weight:normal'>Alt</b> ignored, <b 3021 style='mso-bidi-font-weight:normal'>Shift</b> & <b style='mso-bidi-font-weight: 3022 normal'>Ctrl</b> allow selection of multiple <span class=GramE>cells</span> but 3023 no use is made of them). An individual data item can be cut/pasted anywhere 3024 including from/to another document. Bad entries are rejected. If any entry is 3025 changed, press <b style='mso-bidi-font-weight:normal'>Enter</b> key or select 3026 another atom entry to apply the change.<span class=MsoHyperlink><span 3290 3027 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p> 3291 3028 3292 3029 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3293 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3030 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3294 3031 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3295 3032 color:windowtext;text-decoration:none;text-underline:none'><span 3296 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 3297 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3298 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Name</span></b><span3033 style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 3034 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 3035 style='mso-fareast-font-family:"Times New Roman"'>Name</span></b><span 3299 3036 style='mso-fareast-font-family:"Times New Roman"'> – can change to any text 3300 3037 string. <span class=MsoHyperlink><span style='color:windowtext;text-decoration: … … 3302 3039 3303 3040 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3304 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3041 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3305 3042 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3306 3043 color:windowtext;text-decoration:none;text-underline:none'><span 3307 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 3308 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3309 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>Type</span></b><span3044 style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 3045 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 3046 style='mso-fareast-font-family:"Times New Roman"'>Type</span></b><span 3310 3047 style='mso-fareast-font-family:"Times New Roman"'> – causes a popup display of 3311 3048 the Periodic Table of the elements; select the element/valence desired; the … … 3314 3051 3315 3052 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3316 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3053 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3317 3054 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3318 3055 color:windowtext;text-decoration:none;text-underline:none'><span 3319 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 3320 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3321 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>refine</span></b><span3056 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 3057 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 3058 style='mso-fareast-font-family:"Times New Roman"'>refine</span></b><span 3322 3059 style='mso-fareast-font-family:"Times New Roman"'> – shows a pulldown of 3323 3060 allowed refinement flag choices to be shown; select one (top entry is blank for … … 3326 3063 3327 3064 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3328 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3065 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3329 3066 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3330 3067 color:windowtext;text-decoration:none;text-underline:none'><span 3331 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 3332 </span></span></span></span><![endif]><span dir=LTR></span><span class=SpellE><span 3333 class=GramE><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 3334 "Times New Roman"'>x,y</span></b></span><b style='mso-bidi-font-weight:normal'><span 3335 style='mso-fareast-font-family:"Times New Roman"'>,z</span></b></span><span 3068 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 3069 </span></span></span></span><![endif]><span class=SpellE><span class=GramE><b 3070 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>x,y</span></b></span><b 3071 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>,z</span></b></span><span 3336 3072 style='mso-fareast-font-family:"Times New Roman"'> – change atom coordinate. 3337 Fractions (<span class=GramE>e.g.</span> 1/3, 1/4) are allowed.<span 3338 class=MsoHyperlink><span style='color:windowtext;text-decoration:none; 3339 text-underline:none'><o:p></o:p></span></span></span></p> 3340 3341 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3342 auto;text-indent:-.25in;mso-list:l3 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3073 Fractions (e.g. 1/3, 1/4) are allowed.<span class=MsoHyperlink><span 3074 style='color:windowtext;text-decoration:none;text-underline:none'><o:p></o:p></span></span></span></p> 3075 3076 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3077 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3343 3078 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3344 3079 color:windowtext;text-decoration:none;text-underline:none'><span 3345 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 3346 </span></span></span></span><![endif]><span dir=LTR></span><span class=SpellE><span 3347 class=GramE><b style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family: 3348 "Times New Roman"'>frac,Uiso</span></b></span><b style='mso-bidi-font-weight: 3349 normal'><span style='mso-fareast-font-family:"Times New Roman"'>,Uij</span></b></span><span 3080 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 3081 </span></span></span></span><![endif]><span class=SpellE><span class=GramE><b 3082 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>frac,Uiso</span></b></span><b 3083 style='mso-bidi-font-weight:normal'><span style='mso-fareast-font-family:"Times New Roman"'>,Uij</span></b></span><span 3350 3084 style='mso-fareast-font-family:"Times New Roman"'> – change these values; 3351 3085 fractions (e.g. 1/3, 1/4) are allowed.<span class=MsoHyperlink><span … … 3353 3087 3354 3088 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3355 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3089 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3356 3090 class=MsoHyperlink><span style='mso-fareast-font-family:"Times New Roman"; 3357 3091 color:windowtext;text-decoration:none;text-underline:none'><span 3358 style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 3359 </span></span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:3360 normal'><spanstyle='mso-fareast-font-family:"Times New Roman"'>I/A</span></b><span3092 style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 3093 </span></span></span></span><![endif]><b style='mso-bidi-font-weight:normal'><span 3094 style='mso-fareast-font-family:"Times New Roman"'>I/A</span></b><span 3361 3095 style='mso-fareast-font-family:"Times New Roman"'> – select one of <b 3362 3096 style='mso-bidi-font-weight:normal'>I</b>(<span class=SpellE>sotropic</span>) … … 3368 3102 3369 3103 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3370 auto;text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3104 auto;text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3371 3105 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>5.<span 3372 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3373 dir=LTR></span>Menu ‘<b style='mso-bidi-font-weight:normal'>Edit Atoms’ - </b>The 3374 edit menu shows operations that can be performed on your selected atoms. You 3375 m ust select one or more atoms before using many of the menu items.</p>3376 3377 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3378 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3106 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>Menu 3107 ‘<b style='mso-bidi-font-weight:normal'>Edit Atoms’ - </b>The edit menu shows 3108 operations that can be performed on your selected atoms. You must select one or 3109 more atoms before using many of the menu items.</p> 3110 3111 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3112 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3379 3113 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 3380 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3381 dir=LTR></span><b>Onselected atoms …</b> - </p>3114 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>On 3115 selected atoms …</b> - </p> 3382 3116 3383 3117 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3384 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3118 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3385 3119 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 3386 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3387 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Refine selected </b>– A 3388 popup dialog box appears; select refinement flags to apply to all selected 3389 atoms.</p> 3120 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3121 style='mso-bidi-font-weight:normal'>Refine selected </b>– A popup dialog box 3122 appears; select refinement flags to apply to all selected atoms.</p> 3390 3123 3391 3124 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3392 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3125 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3393 3126 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>2.<span 3394 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3395 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Modify parameters</b> – A 3396 popup dialog box appears with a list of atom parameter names; select one to 3397 apply to all selected atoms. <b style='mso-bidi-font-weight:normal'>Name</b> 3398 will rename selected atoms according to position in table (e.g. <span 3399 class=GramE>Na(</span>1) for Na atom as 1<sup>st</sup> atom in list in row 3400 ‘0’). <b style='mso-bidi-font-weight:normal'>Type</b> will give periodic table 3401 popup; selected element valence will be used for all selected atoms and atoms 3402 names will be changed. <b style='mso-bidi-font-weight:normal'>I/A</b> will give 3403 popup with choices to be used for all selected atoms. <span class=SpellE><span 3404 class=GramE><b style='mso-bidi-font-weight:normal'>x,y</b></span><b 3405 style='mso-bidi-font-weight:normal'>,z</b></span> will give popup for shift to 3406 be applied to the parameter for all selected atoms. <span class=SpellE><b 3407 style='mso-bidi-font-weight:normal'>Uiso</b></span> and <b style='mso-bidi-font-weight: 3408 normal'>frac</b> will give popup for new value to be used for all selected 3409 atoms. </p> 3127 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3128 style='mso-bidi-font-weight:normal'>Modify parameters</b> – A popup dialog box 3129 appears with a list of atom parameter names; select one to apply to all 3130 selected atoms. <b style='mso-bidi-font-weight:normal'>Name</b> will rename selected 3131 atoms according to position in table (e.g. <span class=GramE>Na(</span>1) for 3132 Na atom as 1<sup>st</sup> atom in list in row ‘0’). <b style='mso-bidi-font-weight: 3133 normal'>Type</b> will give periodic table popup; selected element valence will 3134 be used for all selected atoms and atoms names will be changed. <b 3135 style='mso-bidi-font-weight:normal'>I/A</b> will give popup with choices to be 3136 used for all selected atoms. <span class=SpellE><span class=GramE><b 3137 style='mso-bidi-font-weight:normal'>x,y</b></span><b style='mso-bidi-font-weight: 3138 normal'>,z</b></span> will give popup for shift to be applied to the parameter 3139 for all selected atoms. <span class=SpellE><b style='mso-bidi-font-weight:normal'>Uiso</b></span> 3140 and <b style='mso-bidi-font-weight:normal'>frac</b> will give popup for new 3141 value to be used for all selected atoms. </p> 3410 3142 3411 3143 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3412 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3144 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3413 3145 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>3.<span 3414 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3415 dir=LTR></span><b>Set viewpoint</b> – Set the viewpoint to be position of 1st 3416 selected atom</p> 3146 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Set 3147 viewpoint</b> – Set the viewpoint to be position of 1st selected atom</p> 3417 3148 3418 3149 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3419 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3150 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3420 3151 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>4.<span 3421 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3422 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Move atom to viewpoint </b>– 3423 Move a singleatom to viewpoint in plot.</p>3152 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3153 style='mso-bidi-font-weight:normal'>Move atom to viewpoint </b>– Move a single 3154 atom to viewpoint in plot.</p> 3424 3155 3425 3156 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3426 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3157 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3427 3158 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>5.<span 3428 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3429 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Insert atom</b> – insert 3430 an H atom (name= <span class=SpellE>Unk</span>) at 0,0,0 before the selected 3431 a tom, it is also drawn as an H atom in the structure plot.</p>3159 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3160 style='mso-bidi-font-weight:normal'>Insert atom</b> – insert an H atom (name= <span 3161 class=SpellE>Unk</span>) at 0,0,0 before the selected atom, it is also drawn as 3162 an H atom in the structure plot.</p> 3432 3163 3433 3164 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3434 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3165 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3435 3166 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>6.<span 3436 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3437 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Insert viewpoint</b> – 3438 insert an H atom (name= <span class=SpellE>Unk</span>) before the selected atom 3439 with coordinates matching the location of the viewpoint, it is also drawn as an 3440 H atom in thestructure plot.</p>3167 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3168 style='mso-bidi-font-weight:normal'>Insert viewpoint</b> – insert an H atom 3169 (name= <span class=SpellE>Unk</span>) before the selected atom with coordinates 3170 matching the location of the viewpoint, it is also drawn as an H atom in the 3171 structure plot.</p> 3441 3172 3442 3173 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3443 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3174 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3444 3175 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>7.<span 3445 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3446 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Calc H atoms </b>– insert 3447 H-atoms instandard positions based on bonding patterns about selected atoms.</p>3176 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3177 style='mso-bidi-font-weight:normal'>Calc H atoms </b>– insert H-atoms in 3178 standard positions based on bonding patterns about selected atoms.</p> 3448 3179 3449 3180 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3450 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3181 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3451 3182 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>8.<span 3452 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3453 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Delete atom</b> – 3454 selected atoms will be deleted from the atom list; they should also vanish from 3455 the structure drawing.</p> 3183 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3184 style='mso-bidi-font-weight:normal'>Delete atom</b> – selected atoms will be 3185 deleted from the atom list; they should also vanish from the structure drawing.</p> 3456 3186 3457 3187 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3458 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3188 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3459 3189 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>9.<span 3460 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3461 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Transform atoms</b> – A 3462 popup dialog box appears; select space group operator/unit cell translation to 3463 apply to the selected atoms. You can optionally force the result to be within 3464 the unit cell and optionally generate a new set of atom positions. You may also 3465 invert a <span class=SpellE>noncentrosymmetric</span> structure. NB: many of 3466 these operationsonly make sense if all atoms are selected.</p>3190 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3191 style='mso-bidi-font-weight:normal'>Transform atoms</b> – A popup dialog box 3192 appears; select space group operator/unit cell translation to apply to the 3193 selected atoms. You can optionally force the result to be within the unit cell 3194 and optionally generate a new set of atom positions. You may also invert a <span 3195 class=SpellE>noncentrosymmetric</span> structure. NB: many of these operations 3196 only make sense if all atoms are selected.</p> 3467 3197 3468 3198 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3469 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3199 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3470 3200 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>10.<span 3471 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span3472 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Select all </b>– Selects 3473 all atoms forfurther changes. Atoms in drawing will turn green.</p>3201 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3202 style='mso-bidi-font-weight:normal'>Select all </b>– Selects all atoms for 3203 further changes. Atoms in drawing will turn green.</p> 3474 3204 3475 3205 <p class=MsoListParagraphCxSpMiddle style='margin-left:2.0in;mso-add-space: 3476 auto;text-indent:-.25in;mso-list:l 3level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3206 auto;text-indent:-.25in;mso-list:l2 level4 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3477 3207 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>11.<span 3478 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span3479 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Select from list </b>– A 3480 popup appears allowing selection of atoms for further changes. Selected atoms 3481 will turngreen.</p>3482 3483 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3484 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3208 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3209 style='mso-bidi-font-weight:normal'>Select from list </b>– A popup appears 3210 allowing selection of atoms for further changes. Selected atoms will turn 3211 green.</p> 3212 3213 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3214 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3485 3215 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 3486 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3487 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Append atom</b> – addan3488 H atom (name= <span class=SpellE>Unk</span>) at 0,0,0 to the end of the atom 3489 table, it is alsodrawn as an H atom in the structure plot.</p>3490 3491 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3492 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3216 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3217 style='mso-bidi-font-weight:normal'>Append atom</b> – add an H atom (name= <span 3218 class=SpellE>Unk</span>) at 0,0,0 to the end of the atom table, it is also 3219 drawn as an H atom in the structure plot.</p> 3220 3221 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3222 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3493 3223 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 3494 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3495 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Append viewpoint</b> – 3496 add an H atom (name= <span class=SpellE>Unk</span>) to the end of the atom 3497 table with coordinates matching the location of the viewpoint, it is drawn as 3498 an H atom in thestructure plot.</p>3499 3500 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3501 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3224 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3225 style='mso-bidi-font-weight:normal'>Append viewpoint</b> – add an H atom (name= 3226 <span class=SpellE>Unk</span>) to the end of the atom table with coordinates 3227 matching the location of the viewpoint, it is drawn as an H atom in the 3228 structure plot.</p> 3229 3230 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3231 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3502 3232 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 3503 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3504 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Update H atoms </b>– </p>3505 3506 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3507 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3233 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3234 style='mso-bidi-font-weight:normal'>Update H atoms </b>– </p> 3235 3236 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3237 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3508 3238 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 3509 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3510 dir=LTR></span><b>Assemble molecule</b> – move atoms to create single <span 3511 class=GramE>molecule;</span>not appropriate for extended structures.</p>3512 3513 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3514 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3239 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Assemble 3240 molecule</b> – move atoms to create single <span class=GramE>molecule;</span> 3241 not appropriate for extended structures.</p> 3242 3243 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3244 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3515 3245 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>f.<span 3516 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3517 dir=LTR></span><b>Collect atoms</b> – move atoms to be closest to selected 3518 position</p>3519 3520 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3521 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3246 style='font:7.0pt "Times New Roman"'> 3247 </span></span></span><![endif]><b>Collect atoms</b> – move atoms to be closest 3248 to selected position</p> 3249 3250 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3251 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3522 3252 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>g.<span 3523 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3524 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Reload draw atoms</b> – 3525 reload drawingatoms from current atom list.</p>3253 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3254 style='mso-bidi-font-weight:normal'>Reload draw atoms</b> – reload drawing 3255 atoms from current atom list.</p> 3526 3256 3527 3257 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3528 auto;text-indent:-.25in;mso-list:l 3level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3258 auto;text-indent:-.25in;mso-list:l2 level1 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3529 3259 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>6.<span 3530 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3531 dir=LTR></span>Menu<bstyle='mso-bidi-font-weight:normal'> ‘Compute’ – </b></p>3532 3533 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3534 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3260 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>Menu<b 3261 style='mso-bidi-font-weight:normal'> ‘Compute’ – </b></p> 3262 3263 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3264 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3535 3265 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 3536 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3537 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Show Distances & 3538 Angles – </b>compute distances and angles with <span class=SpellE>esds</span> 3539 (if possible) for selected atoms. A popup dialog box will appear with distance 3540 angle controls. NB: if atoms have been added or their type changed, you may 3541 need to do a <b style='mso-bidi-font-weight:normal'>Reset</b> of this dialog 3542 box beforeproceeding.</p>3543 3544 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3545 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3266 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3267 style='mso-bidi-font-weight:normal'>Show Distances & Angles – </b>compute 3268 distances and angles with <span class=SpellE>esds</span> (if possible) for 3269 selected atoms. A popup dialog box will appear with distance angle controls. 3270 NB: if atoms have been added or their type changed, you may need to do a <b 3271 style='mso-bidi-font-weight:normal'>Reset</b> of this dialog box before 3272 proceeding.</p> 3273 3274 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3275 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3546 3276 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 3547 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3548 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Save Distances & 3549 Angles –</b> same as a. but reports result to a file with extension<span3550 class= GramE>“.<span class=SpellE>disagl</span></span>”.</p>3551 3552 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3553 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3277 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3278 style='mso-bidi-font-weight:normal'>Save Distances & Angles –</b> same as 3279 a. but reports result to a file with extension <span class=GramE>“.<span 3280 class=SpellE>disagl</span></span>”.</p> 3281 3282 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3283 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3554 3284 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 3555 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3556 dir=LTR></span><b>Histogram bonds and angles</b> – forms histograms of bond 3557 lengths & angles aboutselected atoms.</p>3558 3559 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3560 auto;text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3285 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Histogram 3286 bonds and angles</b> – forms histograms of bond lengths & angles about 3287 selected atoms.</p> 3288 3289 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3290 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3561 3291 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 3562 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3563 dir=LTR></span><b>Apportion atom frac</b> – after selection of a 2<sup>nd</sup> 3564 element; this determines from atomic number and neutron scattering length the 3565 atom fractions of each type for selected atoms and presents results on the 3566 console.</p> 3567 3568 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3569 auto;text-indent:-.25in;mso-list:l3 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3292 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Apportion 3293 atom frac</b> – after selection of a 2<sup>nd</sup> element; this determines 3294 from atomic number and neutron scattering length the atom fractions of each 3295 type for selected atoms and presents results on the console.</p> 3296 3297 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3298 auto;text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3570 3299 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 3571 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3572 dir=LTR></span><b>Density</b>– calculate density</p>3300 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b>Density 3301 </b>– calculate density</p> 3573 3302 3574 3303 <p class=MsoListParagraphCxSpLast style='margin-left:1.5in;mso-add-space:auto; 3575 text-indent:-.25in;mso-list:l 3level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3304 text-indent:-.25in;mso-list:l2 level2 lfo6;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3576 3305 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>f.<span 3577 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3578 dir=LTR></span><b>ISODISTORT mode values</b> - </p>3306 style='font:7.0pt "Times New Roman"'> 3307 </span></span></span><![endif]><b>ISODISTORT mode values</b> - </p> 3579 3308 3580 3309 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 3600 3329 "Times New Roman"'><span style='mso-spacerun:yes'> </span><b>Right</b></span></span><b><span 3601 3330 style='mso-fareast-font-family:"Times New Roman"'> drag</span></b><span 3602 style='mso-fareast-font-family:"Times New Roman"'>: Holding down right button translates3603 t he fractional coordinates assigned to the viewpoint (which is kept at the3604 center of the plot). The structure will appear to translate. The viewpoint can 3605 also be entered directly in the Draw Options. <o:p></o:p></span></p>3331 style='mso-fareast-font-family:"Times New Roman"'>: Holding down right button 3332 translates the fractional coordinates assigned to the viewpoint (which is kept 3333 at the center of the plot). The structure will appear to translate. The 3334 viewpoint can also be entered directly in the Draw Options. <o:p></o:p></span></p> 3606 3335 3607 3336 <p class=MsoNormal style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 3649 3378 3650 3379 <p class=MsoListParagraphCxSpFirst style='margin-left:.25in;mso-add-space:auto; 3651 text-indent:-.25in;mso-list:l 7level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3380 text-indent:-.25in;mso-list:l4 level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3652 3381 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3653 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3654 </span></span></span><![endif]>< span dir=LTR></span><b><span style='mso-fareast-font-family:3655 "Times New Roman"'>Key ‘n’</span></b><span style='mso-fareast-font-family:"Times New Roman"'>: 3656 Selectnext atom in the displayed atom list.<o:p></o:p></span></p>3382 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3383 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>Key 3384 ‘n’</span></b><span style='mso-fareast-font-family:"Times New Roman"'>: Select 3385 next atom in the displayed atom list.<o:p></o:p></span></p> 3657 3386 3658 3387 <p class=MsoListParagraphCxSpMiddle style='margin-left:.25in;mso-add-space: 3659 auto;text-indent:-.25in;mso-list:l 7level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3388 auto;text-indent:-.25in;mso-list:l4 level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3660 3389 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3661 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3662 </span></span></span><![endif]>< span dir=LTR></span><b><span style='mso-fareast-font-family:3663 "Times New Roman"'>Key ‘p’</span></b><span style='mso-fareast-font-family:"Times New Roman"'>: 3664 Selectthe previous atom in the displayed atom list.<o:p></o:p></span></p>3390 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3391 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>Key 3392 ‘p’</span></b><span style='mso-fareast-font-family:"Times New Roman"'>: Select 3393 the previous atom in the displayed atom list.<o:p></o:p></span></p> 3665 3394 3666 3395 <p class=MsoListParagraphCxSpLast style='margin-left:.25in;mso-add-space:auto; 3667 text-indent:-.25in;mso-list:l 7level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3396 text-indent:-.25in;mso-list:l4 level1 lfo8;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3668 3397 style='font-family:Symbol;mso-fareast-font-family:Symbol;mso-bidi-font-family: 3669 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3670 </span></span></span><![endif]>< span dir=LTR></span><b><span style='mso-fareast-font-family:3671 "Times New Roman"'>Key ‘c’:</span></b><span style='mso-fareast-font-family: 3672 "Times New Roman"'> Set viewpoint at unit cell center. <span class=GramE>Resets</span>3673 n/p selection item to 1<sup>st</sup>atom.<o:p></o:p></span></p>3398 Symbol'><span style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 3399 </span></span></span><![endif]><b><span style='mso-fareast-font-family:"Times New Roman"'>Key 3400 ‘c’:</span></b><span style='mso-fareast-font-family:"Times New Roman"'> Set 3401 viewpoint at unit cell center. Resets n/p selection item to 1<sup>st</sup> 3402 atom.<o:p></o:p></span></p> 3674 3403 3675 3404 <p class=MsoNormal style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 3685 3414 3686 3415 <p class=MsoNormal style='margin-left:.75in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>The 3687 Draw Options window provides access to <span class=GramE>a number of</span>3688 items that control how thestructure is displayed. </p>3416 Draw Options window provides access to a number of items that control how the 3417 structure is displayed. </p> 3689 3418 3690 3419 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 3750 3479 3751 3480 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 3752 text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3481 text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3753 3482 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 3754 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3755 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Atom Selection from table</b>: 3756 select individual atoms by a left click of the mouse when pointed at the left3757 most column (atom numbers) of the atom display; hold down the Ctrl key to add 3758 to your selection; a previously selected atom will be deselected; hold down 3759 Shift key to select from last in list selected to current selection. A selected 3760 atom will be highlighted (in grey) and the atoms will be shown in green on the 3761 plot. Selection without the Ctrl key will clear previous selections. A double 3762 leftclick in the (empty) upper left box will select or deselect all atoms.</p>3483 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3484 style='mso-bidi-font-weight:normal'>Atom Selection from table</b>: select 3485 individual atoms by a left click of the mouse when pointed at the left most 3486 column (atom numbers) of the atom display; hold down the Ctrl key to add to 3487 your selection; a previously selected atom will be deselected; hold down Shift 3488 key to select from last in list selected to current selection. A selected atom 3489 will be highlighted (in grey) and the atoms will be shown in green on the plot. 3490 Selection without the Ctrl key will clear previous selections. A double left 3491 click in the (empty) upper left box will select or deselect all atoms.</p> 3763 3492 3764 3493 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3765 auto;text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3494 auto;text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3766 3495 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>2.<span 3767 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3768 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Atom Selection from plot</b>: 3769 select an atom by a left click of the mouse while holding down the Shift key 3770 and pointed at the center of the displayed atom, it will turn green if 3771 successful and the corresponding entry in the table will be highlighted (in 3772 grey); any previous selections will be cleared. To add <span class=GramE>to 3773 .your</span> selection use the right mouse button (Shift down); if a previously 3774 selection is reselected it is removed from the selection list. <b 3775 style='mso-bidi-font-weight:normal'>NB</b>: beware of atoms that are hiding 3776 behind the one you are trying to <span class=GramE>select,</span> they may be 3777 selected inadvertently. You can rotate the structure anytime during the 3778 selection process.</p> 3496 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3497 style='mso-bidi-font-weight:normal'>Atom Selection from plot</b>: select an 3498 atom by a left click of the mouse while holding down the Shift key and pointed 3499 at the center of the displayed atom, it will turn green if successful and the 3500 corresponding entry in the table will be highlighted (in grey); any previous 3501 selections will be cleared. To add <span class=GramE>to .your</span> selection 3502 use the right mouse button (Shift down); if a previously selection is 3503 reselected it is removed from the selection list. <b style='mso-bidi-font-weight: 3504 normal'>NB</b>: beware of atoms that are hiding behind the one you are trying 3505 to <span class=GramE>select,</span> they may be selected inadvertently. You can 3506 rotate the structure anytime during the selection process.</p> 3779 3507 3780 3508 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3781 auto;text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3509 auto;text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3782 3510 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>3.<span 3783 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3784 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Double left click a Name, 3785 Type and <span class=SpellE>Sym</span> Op column heading</b>: a dialog box is 3786 shown that allows you to select all atoms with that characteristic. For3511 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3512 style='mso-bidi-font-weight:normal'>Double left <span class=GramE>click</span> 3513 a Name, Type and <span class=SpellE>Sym</span> Op column heading</b>: a dialog 3514 box is shown that allows you to select all atoms with that characteristic. For 3787 3515 example, selecting the Type column will show all the atom types; your choice 3788 3516 will then cause all those atoms to be selected.</p> 3789 3517 3790 3518 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3791 auto;text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3519 auto;text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3792 3520 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>4.<span 3793 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3794 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Double left click a 3795 Style, Label or Color column</b>: a dialog box is shown that allows you to3521 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3522 style='mso-bidi-font-weight:normal'>Double left <span class=GramE>click</span> 3523 a Style, Label or Color column</b>: a dialog box is shown that allows you to 3796 3524 select a rendering option for all the atoms. For Color a color choice dialog is 3797 3525 displayed that covers the entire color spectrum. Choose a color by any of the … … 3803 3531 3804 3532 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3805 auto;text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3533 auto;text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3806 3534 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>5.<span 3807 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3808 dir=LTR></span>Menu ‘<b style='mso-bidi-font-weight:normal'>Edit’ - </b>The 3809 edit menu shows operations that can be performed on your selected atoms. You 3810 m ust select one or more atoms before using any of the menu items. Most of these3811 items can also be accessed by selecting one or more atoms and <span 3812 class=GramE>right-clicking</span>the mouse.</p>3813 3814 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3815 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3535 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>Menu 3536 ‘<b style='mso-bidi-font-weight:normal'>Edit’ - </b>The edit menu shows 3537 operations that can be performed on your selected atoms. You must select one or 3538 more atoms before using any of the menu items. Most of these items can also be 3539 accessed by selecting one or more atoms and <span class=GramE>right-clicking</span> 3540 the mouse.</p> 3541 3542 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3543 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3816 3544 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 3817 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3818 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Atom style</b> – select 3819 the rendering stylefor the selected atoms</p>3820 3821 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3822 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3545 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3546 style='mso-bidi-font-weight:normal'>Atom style</b> – select the rendering style 3547 for the selected atoms</p> 3548 3549 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3550 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3823 3551 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 3824 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3825 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Atom label</b> – select 3826 the item to be shown as a label for each atom in selection. The choices <span 3827 class=GramE>are:</span>none, type, name or number.</p>3828 3829 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3830 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3552 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3553 style='mso-bidi-font-weight:normal'>Atom label</b> – select the item to be shown 3554 as a label for each atom in selection. The choices <span class=GramE>are:</span> 3555 none, type, name or number.</p> 3556 3557 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3558 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3831 3559 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 3832 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3833 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Atom color</b> – select 3834 the color for the atom; a color choice dialog is displayed that covers the 3835 entire color spectrum. Choose a color by any of the means available, press the 3836 “Add to Custom Colors”, select that color in the Custom colors display and then 3837 press OK.</p> 3838 3839 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3840 auto;text-indent:-.25in;mso-list:l11 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3560 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3561 style='mso-bidi-font-weight:normal'>Atom color</b> – select the color for the 3562 atom; a color choice dialog is displayed that covers the entire color spectrum. 3563 Choose a color by any of the means available, press the “Add to Custom Colors”, 3564 select that color in the Custom colors display and then press OK.</p> 3565 3566 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3567 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3841 3568 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>d.<span 3842 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3843 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Reset atom colors</b> – 3844 return the atomcolor back to their defaults for the selected atoms.</p>3845 3846 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3847 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3569 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3570 style='mso-bidi-font-weight:normal'>Reset atom colors</b> – return the atom 3571 color back to their defaults for the selected atoms.</p> 3572 3573 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3574 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3848 3575 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>e.<span 3849 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3850 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Edit atom radii </b>- </p>3851 3852 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3853 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3576 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3577 style='mso-bidi-font-weight:normal'>Edit atom radii </b>- </p> 3578 3579 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3580 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3854 3581 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>f.<span 3855 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3856 dir=LTR></span><span class=GramE><b style='mso-bidi-font-weight:normal'>View 3857 point</b></span> – position the plot view point to the first atom in the 3858 selection.</p>3859 3860 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3861 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3582 style='font:7.0pt "Times New Roman"'> 3583 </span></span></span><![endif]><span class=GramE><b style='mso-bidi-font-weight: 3584 normal'>View point</b></span> – position the plot view point to the first atom 3585 in the selection.</p> 3586 3587 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3588 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3862 3589 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>g.<span 3863 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3864 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Select from list </b>- </p>3865 3866 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3867 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3590 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3591 style='mso-bidi-font-weight:normal'>Select from list </b>- </p> 3592 3593 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3594 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3868 3595 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>h.<span 3869 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3870 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Add atoms</b> – using the 3871 selected atoms, new ones are added to the bottom of the list after applying 3872 your choice of symmetry operator and unit cell translation selected via a 3873 dialog display. Duplicate atom positions are not retained. Any anisotropic 3874 thermal displacement parameters (<span class=SpellE>Uij</span>) will be 3875 transformed as appropriate.</p> 3876 3877 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3878 auto;text-indent:-.25in;mso-list:l11 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3596 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3597 style='mso-bidi-font-weight:normal'>Add atoms</b> – using the selected atoms, 3598 new ones are added to the bottom of the list after applying your choice of 3599 symmetry operator and unit cell translation selected via a dialog display. 3600 Duplicate atom positions are not retained. Any anisotropic thermal displacement 3601 parameters (<span class=SpellE>Uij</span>) will be transformed as appropriate.</p> 3602 3603 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3604 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3879 3605 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>i.<span 3880 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3881 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Add sphere of atoms </b>- 3882 </p>3883 3884 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3885 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3606 style='font:7.0pt "Times New Roman"'> 3607 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Add 3608 sphere of atoms </b>- </p> 3609 3610 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3611 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3886 3612 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>j.<span 3887 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3888 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Transform draw atoms</b> 3889 – apply a symmetry operator and unit cell translation to the set of selected 3890 atoms; they will be changed in place. Any anisotropic thermal displacement 3891 parameters (<span class=SpellE>Uij</span>) will be transformed as appropriate.</p> 3892 3893 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3894 auto;text-indent:-.25in;mso-list:l11 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3613 style='font:7.0pt "Times New Roman"'> 3614 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Transform 3615 draw atoms</b> – apply a symmetry operator and unit cell translation to the set 3616 of selected atoms; they will be changed in place. Any anisotropic thermal 3617 displacement parameters (<span class=SpellE>Uij</span>) will be transformed as 3618 appropriate.</p> 3619 3620 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3621 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3895 3622 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>k.<span 3896 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3897 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Fill CN-sphere</b> – 3898 using the atoms currently in the draw atom table, find all atoms that belong in 3899 the coordination sphere around the selected atoms via unit cell translations. 3900 NB:symmetry operations are not used in this search.</p>3901 3902 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3903 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3623 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3624 style='mso-bidi-font-weight:normal'>Fill CN-sphere</b> – using the atoms 3625 currently in the draw atom table, find all atoms that belong in the 3626 coordination sphere around the selected atoms via unit cell translations. NB: 3627 symmetry operations are not used in this search.</p> 3628 3629 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3630 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3904 3631 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>l.<span 3905 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3906 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Fill unit cell</b> - 3907 using the atoms currently selected from the draw atom table, find all atoms 3908 that fall inside or on the edge/surface/corners of the unit cell. This 3909 operation is frequently performed before Fill CN-sphere.</p>3910 3911 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3912 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3632 style='font:7.0pt "Times New Roman"'> 3633 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Fill unit 3634 cell</b> - using the atoms currently selected from the draw atom table, find 3635 all atoms that fall inside or on the edge/surface/corners of the unit cell. 3636 This operation is frequently performed before Fill CN-sphere.</p> 3637 3638 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3639 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3913 3640 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>m.<span 3914 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3915 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Complete molecule </b>– </p>3916 3917 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3918 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3641 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3642 style='mso-bidi-font-weight:normal'>Complete molecule </b>– </p> 3643 3644 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3645 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3919 3646 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>n.<span 3920 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3921 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Create void map </b>- </p>3922 3923 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3924 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3647 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3648 style='mso-bidi-font-weight:normal'>Create void map </b>- </p> 3649 3650 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3651 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3925 3652 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>o.<span 3926 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3927 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Delete atoms</b> – clear 3928 the entire draw atom table; it is then refilled from the Atoms table. You 3929 should do this operation after any changes in the Atoms table, <span 3930 class=GramE>e.g.</span> by a structure refinement.</p> 3931 3932 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3933 auto;text-indent:-.25in;mso-list:l11 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3653 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3654 style='mso-bidi-font-weight:normal'>Delete atoms</b> – clear the entire draw 3655 atom table; it is then refilled from the Atoms table. You should do this 3656 operation after any changes in the Atoms table, e.g. by a structure refinement.</p> 3657 3658 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3659 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3934 3660 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>p.<span 3935 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3936 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Update draw atoms </b>– </p>3937 3938 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3939 auto;text-indent:-.25in;mso-list:l 11level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3661 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3662 style='mso-bidi-font-weight:normal'>Update draw atoms </b>– </p> 3663 3664 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3665 auto;text-indent:-.25in;mso-list:l8 level1 lfo12;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3940 3666 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>q.<span 3941 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3942 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Load selected atoms </b>- 3943 </p> 3667 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3668 style='mso-bidi-font-weight:normal'>Load selected atoms </b>- </p> 3944 3669 3945 3670 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 3946 auto;text-indent:-.25in;mso-list:l 8level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span3671 auto;text-indent:-.25in;mso-list:l5 level1 lfo10;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 3947 3672 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>6.<span 3948 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3949 dir=LTR></span>Menu ‘<b style='mso-bidi-font-weight:normal'>Compute’</b> - The 3950 c ompute menu gives a choice of geometric calculations to be performed with the3951 select ed atoms. You must select the appropriate number of atoms for these to3952 work and the computation isdone for the atoms in selection order.</p>3953 3954 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3955 auto;text-indent:-.25in;mso-list:l 8level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span3673 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>Menu 3674 ‘<b style='mso-bidi-font-weight:normal'>Compute’</b> - The compute menu gives a 3675 choice of geometric calculations to be performed with the selected atoms. You must 3676 select the appropriate number of atoms for these to work and the computation is 3677 done for the atoms in selection order.</p> 3678 3679 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3680 auto;text-indent:-.25in;mso-list:l5 level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span 3956 3681 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 3957 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3958 dir=LTR></span><b style='mso-bidi-font-weight:normal'>View pt. dist.</b> - this3959 calculates distance from <span class=GramE>view point</span> to all selected 3960 draw atoms;result is given on the console window.</p>3961 3962 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3963 auto;text-indent:-.25in;mso-list:l 8level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span3682 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3683 style='mso-bidi-font-weight:normal'>View pt. dist.</b> - this calculates 3684 distance from <span class=GramE>view point</span> to all selected draw atoms; 3685 result is given on the console window.</p> 3686 3687 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 3688 auto;text-indent:-.25in;mso-list:l5 level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span 3964 3689 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 3965 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span3966 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Dist. Ang.</b> <b 3967 style='mso-bidi-font-weight:normal'>Tors. </b>– when 2-4 atoms are selected, a 3968 distance, angle or torsion angle will be found for them. The angles are 3969 computed for the atoms in their selection order. The torsion angle is a <span 3970 class=GramE>right hand</span> angle about the A2-A3 vector for the sequence of 3971 atoms A1-A2-A3-A4. An estimated standard deviation is given for the calculated 3972 va lue if a current variance-covariance matrix is available. The result is shown3973 on the console window; it may be cut & pasted to another application (<span 3974 class=GramE>e.g.</span> MicrosoftWord).</p>3690 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3691 style='mso-bidi-font-weight:normal'>Dist. Ang.</b> <b style='mso-bidi-font-weight: 3692 normal'>Tors. </b>– when 2-4 atoms are selected, a distance, angle or torsion 3693 angle will be found for them. The angles are computed for the atoms in their 3694 selection order. The torsion angle is a <span class=GramE>right hand</span> 3695 angle about the A2-A3 vector for the sequence of atoms A1-A2-A3-A4. An 3696 estimated standard deviation is given for the calculated value if a current 3697 variance-covariance matrix is available. The result is shown on the console 3698 window; it may be cut & pasted to another application (e.g. Microsoft 3699 Word).</p> 3975 3700 3976 3701 <p class=MsoListParagraphCxSpLast style='margin-left:1.5in;mso-add-space:auto; 3977 text-indent:-.25in;mso-list:l 8level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span3702 text-indent:-.25in;mso-list:l5 level2 lfo10;tab-stops:list 1.0in'><![if !supportLists]><span 3978 3703 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>c.<span 3979 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 3980 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Best plane</b> – when 4 3981 or more atoms are selected, a best plane is determined for them. The result is 3982 shown on the console window; it may be cut & pasted to another application 3983 (<span class=GramE>e.g.</span> Microsoft Word). Shown are the atom coordinates 3984 transformed to Cartesian best plane coordinates where the largest range is over 3985 the X-axis and the smallest is over the Z-axis with the origin at the 3986 unweighted center of the selection. Root mean square displacements along each 3987 axis for the best plane are also listed. The Z-axis RMS value indicates the 3988 flatness of the proposed plane. <b style='mso-bidi-font-weight:normal'>NB</b>: 3989 if you select (<span class=GramE>e.g.</span> all) atoms then Best plane will 3990 give Cartesian coordinates for these atoms with respect to a coordinate system 3991 where the X-axis is along the longest axis of the atom grouping and the Z-axis 3992 is along the shortest distance. The origin is at the unweighted center of the 3993 selected atoms.</p> 3704 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 3705 style='mso-bidi-font-weight:normal'>Best plane</b> – when 4 or more atoms are 3706 selected, a best plane is determined for them. The result is shown on the 3707 console window; it may be cut & pasted to another application (e.g. 3708 Microsoft Word). Shown are the atom coordinates transformed to Cartesian best 3709 plane coordinates where the largest range is over the X-axis and the smallest 3710 is over the Z-axis with the origin at the unweighted center of the selection. 3711 Root mean square displacements along each axis for the best plane are also 3712 listed. The Z-axis RMS value indicates the flatness of the proposed plane. <b 3713 style='mso-bidi-font-weight:normal'>NB</b>: if you select (e.g. all) atoms then 3714 Best plane will give Cartesian coordinates for these atoms with respect to a 3715 coordinate system where the X-axis is along the longest axis of the atom 3716 grouping and the Z-axis is along the shortest distance. The origin is at the 3717 unweighted center of the selected atoms.</p> 3994 3718 3995 3719 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 4021 3745 "Times New Roman"'><span style='mso-spacerun:yes'> </span><b>Right</b></span></span><b><span 4022 3746 style='mso-fareast-font-family:"Times New Roman"'> drag</span></b><span 4023 style='mso-fareast-font-family:"Times New Roman"'>: Holding down right button 4024 t ranslates the fractional coordinates assigned to the view point (which is kept4025 at thecenter of the plot). The structure will appear to translate. (On Mac <span3747 style='mso-fareast-font-family:"Times New Roman"'>: Holding down right button translates 3748 the fractional coordinates assigned to the view point (which is kept at the 3749 center of the plot). The structure will appear to translate. (On Mac <span 4026 3750 class=SpellE>control+mouse</span> drag will also do this). The <span 4027 3751 class=GramE>view point</span> can also be entered directly in the Draw Options. … … 4092 3816 mso-fareast-font-family:"Times New Roman"'>·</span><span style='mso-fareast-font-family: 4093 3817 "Times New Roman"'><span style='mso-spacerun:yes'> </span>Holding</span></span><span 4094 style='mso-fareast-font-family:"Times New Roman"'> down left button (left 4095 drag):rotates axes around screen x & y <o:p></o:p></span></p>3818 style='mso-fareast-font-family:"Times New Roman"'> down left button (left drag): 3819 rotates axes around screen x & y <o:p></o:p></span></p> 4096 3820 4097 3821 <p class=MsoNormal style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 4124 3848 the atoms in the Draw Atoms list and to have atoms displayed as 4125 3849 "Sticks" or "Ball-and-Sticks." The rigid body will be 4126 displayed as "Ball-and-Sticks <span class=GramE>"</span> but bonds4127 will be in green. Use of the Alt key causes the above mouse movements to 4128 reposition the rigid body ratherthan change the view of the crystal structure:<o:p></o:p></p>3850 displayed as "Ball-and-Sticks" but bonds will be in green. Use of the 3851 Alt key causes the above mouse movements to reposition the rigid body rather 3852 than change the view of the crystal structure:<o:p></o:p></p> 4129 3853 4130 3854 <p class=MsoNormal style='tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 4157 3881 the mouse with the right button down translates the rigid body in the screen x 4158 3882 & y directions (rotate the plot to see and move in the rigid body in the 4159 third direction.) Pressing the "Lock" checkbox next to the origin 4160 locationprevents the origin from being changed in this way. </BL><o:p></o:p></span></p>3883 third direction.) Pressing the "Lock" checkbox next to the origin location 3884 prevents the origin from being changed in this way. </BL><o:p></o:p></span></p> 4161 3885 4162 3886 <h4 style='margin-left:.25in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a … … 4184 3908 analysis using GSAS-II employs spherical harmonics modeling, as described by 4185 3909 Bunge, "Texture Analysis in Materials Science" (1982), and 4186 implemented by Von <span class=SpellE>Dreele</span>, J. Appl. <span4187 class=SpellE>Cryst</span>., <b style='mso-bidi-font-weight:normal'>30</b>, 4188 517-525 (1997) in GSAS. The even part of the orientation distribution function 4189 (ODF) via the general axisequation</p>3910 implemented by Von Dreele, J. Appl. <span class=SpellE>Cryst</span>., <b 3911 style='mso-bidi-font-weight:normal'>30</b>, 517-525 (1997) in GSAS. The even 3912 part of the orientation distribution function (ODF) via the general axis 3913 equation</p> 4190 3914 4191 3915 <p class=MsoNormal style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4244 3968 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4245 3969 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4246 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4247 id="_x0000_i1025" type="#_x0000_t75" style='width:26 8pt;height:42pt'>4248 <v:imagedata src="gsasII-phase_files/image003. emz" o:title="" chromakey="white"/>4249 </v:shape><![endif]--><![if !vml]><img width= 268 height=423970 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 3971 id="_x0000_i1025" type="#_x0000_t75" style='width:267.75pt;height:42pt'> 3972 <v:imagedata src="gsasII-phase_files/image003.png" o:title="" chromakey="white"/> 3973 </v:shape><![endif]--><![if !vml]><img width=357 height=56 4250 3974 src="gsasII-phase_files/image004.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4251 3975 … … 4266 3990 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4267 3991 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4268 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4269 type="#_x0000_t75" style='width:33pt;height:26 pt'>4270 <v:imagedata src="gsasII-phase_files/image005. emz" o:title="" chromakey="white"/>4271 </v:shape><![endif]--><![if !vml]><img width= 33 height=263992 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 3993 type="#_x0000_t75" style='width:33pt;height:26.25pt'> 3994 <v:imagedata src="gsasII-phase_files/image005.png" o:title="" chromakey="white"/> 3995 </v:shape><![endif]--><![if !vml]><img width=44 height=35 4272 3996 src="gsasII-phase_files/image006.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4273 3997 style='mso-spacerun:yes'> </span>and <!--[if gte msEquation 12]><m:oMath><m:sSubSup><m:sSubSupPr><span … … 4282 4006 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4283 4007 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4284 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4285 type="#_x0000_t75" style='width:30pt;height:26 pt'>4286 <v:imagedata src="gsasII-phase_files/image007. emz" o:title="" chromakey="white"/>4287 </v:shape><![endif]--><![if !vml]><img width= 30 height=264008 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4009 type="#_x0000_t75" style='width:30pt;height:26.25pt'> 4010 <v:imagedata src="gsasII-phase_files/image007.png" o:title="" chromakey="white"/> 4011 </v:shape><![endif]--><![if !vml]><img width=40 height=35 4288 4012 src="gsasII-phase_files/image008.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 4289 4013 take on values according to the sample and crystal symmetries, respectively, … … 4292 4016 style='mso-bidi-font-weight:bold'>GSAS-II</span> according to the space group 4293 4017 symmetry and the user chosen sample symmetry. The available sample symmetries 4294 are cylindrical, 2/m, mmm and no symmetry. The choice of sample symmetry profoundly4295 affects the selection of harmonic coefficients. For example, in the case of 4296 c ylindrical sample symmetry (fiber texture) only <i>k<sub>L</sub><sup>0</sup>(y)</i>4018 are cylindrical, 2/m, mmm and no symmetry. The choice of sample symmetry 4019 profoundly affects the selection of harmonic coefficients. For example, in the 4020 case of cylindrical sample symmetry (fiber texture) only <i>k<sub>L</sub><sup>0</sup>(y)</i> 4297 4021 terms are nonzero so the rest are excluded from the summations and the set of <i>C<sub>L</sub><sup>0n</sup></i><sup> 4298 4022 </sup>coefficients is sufficient to describe the effect on the diffraction … … 4308 4032 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4309 4033 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4310 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4311 type="#_x0000_t75" style='width:30pt;height:26 pt'>4312 <v:imagedata src="gsasII-phase_files/image00 9.emz" o:title="" chromakey="white"/>4313 </v:shape><![endif]--><![if !vml]><img width= 30 height=264034 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4035 type="#_x0000_t75" style='width:30pt;height:26.25pt'> 4036 <v:imagedata src="gsasII-phase_files/image007.png" o:title="" chromakey="white"/> 4037 </v:shape><![endif]--><![if !vml]><img width=40 height=35 4314 4038 src="gsasII-phase_files/image008.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 4315 4039 is defined for each reflection, h, <i>via</i> polar and azimuthal coordinates (<span … … 4332 4056 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4333 4057 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4334 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4335 type="#_x0000_t75" style='width:33pt;height:26 pt'>4336 <v:imagedata src="gsasII-phase_files/image0 10.emz" o:title="" chromakey="white"/>4337 </v:shape><![endif]--><![if !vml]><img width= 33 height=264338 src="gsasII-phase_files/image01 1.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>,4058 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4059 type="#_x0000_t75" style='width:33pt;height:26.25pt'> 4060 <v:imagedata src="gsasII-phase_files/image009.png" o:title="" chromakey="white"/> 4061 </v:shape><![endif]--><![if !vml]><img width=44 height=35 4062 src="gsasII-phase_files/image010.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 4339 4063 is defined according to polar and azimuthal coordinates (<span 4340 4064 style='font-family:Symbol'>y</span>, <span style='font-family:Symbol'>g</span>) … … 4406 4130 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4407 4131 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4408 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4409 id="_x0000_i1025" type="#_x0000_t75" style='width:32 1pt;height:42pt'>4410 <v:imagedata src="gsasII-phase_files/image01 2.emz" o:title="" chromakey="white"/>4411 </v:shape><![endif]--><![if !vml]><img width= 321 height=424412 src="gsasII-phase_files/image01 3.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><br>4132 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4133 id="_x0000_i1025" type="#_x0000_t75" style='width:320.95pt;height:42pt'> 4134 <v:imagedata src="gsasII-phase_files/image011.png" o:title="" chromakey="white"/> 4135 </v:shape><![endif]--><![if !vml]><img width=428 height=56 4136 src="gsasII-phase_files/image012.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><br> 4413 4137 Note that this version of the general axis equation differs from that shown in 4414 Von <span class=SpellE>Dreele</span> (1997) in that the assignment of m and n 4415 are reversed. </p> 4138 Von Dreele (1997) in that the assignment of m and n are reversed. </p> 4416 4139 4417 4140 <p class=MsoNormal style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4427 4150 to the diffraction plane and J is coincident with the direction of the incident 4428 4151 radiation beam toward the source. We further define a standard set of 4429 right-handed <span class=SpellE>eulerian</span> goniometer angles (<span 4430 style='font-family:Symbol'>W</span>, <span style='font-family:Symbol'>C</span>, 4431 <span style='font-family:Symbol'>F</span>) so that <span style='font-family: 4432 Symbol'>W</span> and <span style='font-family:Symbol'>F</span> are rotations 4433 about K and <span style='font-family:Symbol'>C</span> is a rotation about J 4434 when <span style='font-family:Symbol'>W</span> <span style='font-family:Symbol'><span 4435 style='mso-spacerun:yes'> </span></span>= 0.<span style='mso-spacerun:yes'> 4436 </span>Finally, as the sample may be mounted so that the sample coordinate 4437 system (I<sub>s</sub>, J<sub>s</sub>, K<sub>s</sub>) does not coincide with the 4438 instrument coordinate system (I, J, K), we define three <span class=SpellE>eulerian</span> 4439 sample rotation offset angles (<span style='font-family:Symbol'>W</span><sub>s</sub>, 4152 right-handed eulerian goniometer angles (<span style='font-family:Symbol'>W</span>, 4153 <span style='font-family:Symbol'>C</span>, <span style='font-family:Symbol'>F</span>) 4154 so that <span style='font-family:Symbol'>W</span> and <span style='font-family: 4155 Symbol'>F</span> are rotations about K and <span style='font-family:Symbol'>C</span> 4156 is a rotation about J when <span style='font-family:Symbol'>W</span> <span 4157 style='font-family:Symbol'><span style='mso-spacerun:yes'> </span></span>= 4158 0.<span style='mso-spacerun:yes'> </span>Finally, as the sample may be mounted 4159 so that the sample coordinate system (I<sub>s</sub>, J<sub>s</sub>, K<sub>s</sub>) 4160 does not coincide with the instrument coordinate system (I, J, K), we define 4161 three eulerian sample rotation offset angles (<span style='font-family:Symbol'>W</span><sub>s</sub>, 4440 4162 <span style='font-family:Symbol'>C</span><sub>s</sub>, <span style='font-family: 4441 4163 Symbol'>F</span><sub>s</sub>) that describe the rotation from (I<sub>s</sub>, J<sub>s</sub>, 4442 K<sub>s</sub>) to (I, J, K).<span style='mso-spacerun:yes'> </span>The sample 4443 rotationangles are defined so that with the goniometer angles at zero <span4164 K<sub>s</sub>) to (I, J, K).<span style='mso-spacerun:yes'> </span>The sample rotation 4165 angles are defined so that with the goniometer angles at zero <span 4444 4166 style='font-family:Symbol'>W</span><sub>s</sub> and <span style='font-family: 4445 4167 Symbol'>F</span><sub>s</sub> are rotations about K and <span style='font-family: … … 4486 4208 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4487 4209 top:15.0pt;mso-text-raise:-15.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4488 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4489 type="#_x0000_t75" style='width:3 4pt;height:50pt'>4490 <v:imagedata src="gsasII-phase_files/image01 4.emz" o:title="" chromakey="white"/>4491 </v:shape><![endif]--><![if !vml]><img width= 34 height=504492 src="gsasII-phase_files/image01 5.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4210 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4211 type="#_x0000_t75" style='width:33.75pt;height:50.25pt'> 4212 <v:imagedata src="gsasII-phase_files/image013.png" o:title="" chromakey="white"/> 4213 </v:shape><![endif]--><![if !vml]><img width=45 height=67 4214 src="gsasII-phase_files/image014.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4493 4215 style='mso-spacerun:yes'> </span>and<span style='mso-spacerun:yes'> </span><i>tan</i>(<span 4494 4216 style='font-family:Symbol'>g</span>) = <!--[if gte msEquation 12]><m:oMath><m:f><m:fPr><m:type … … 4521 4243 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4522 4244 top:15.0pt;mso-text-raise:-15.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4523 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4524 type="#_x0000_t75" style='width:80 pt;height:50pt'>4525 <v:imagedata src="gsasII-phase_files/image01 6.emz" o:title="" chromakey="white"/>4526 </v:shape><![endif]--><![if !vml]><img width= 80 height=504527 src="gsasII-phase_files/image01 7.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4245 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4246 type="#_x0000_t75" style='width:80.25pt;height:50.25pt'> 4247 <v:imagedata src="gsasII-phase_files/image015.png" o:title="" chromakey="white"/> 4248 </v:shape><![endif]--><![if !vml]><img width=107 height=67 4249 src="gsasII-phase_files/image016.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4528 4250 4529 4251 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4540 4262 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4541 4263 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4542 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4543 type="#_x0000_t75" style='width:45 pt;height:26pt'>4544 <v:imagedata src="gsasII-phase_files/image01 8.emz" o:title="" chromakey="white"/>4545 </v:shape><![endif]--><![if !vml]><img width= 45 height=264546 src="gsasII-phase_files/image01 9.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4264 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4265 type="#_x0000_t75" style='width:45.75pt;height:26.25pt'> 4266 <v:imagedata src="gsasII-phase_files/image017.png" o:title="" chromakey="white"/> 4267 </v:shape><![endif]--><![if !vml]><img width=61 height=35 4268 src="gsasII-phase_files/image018.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4547 4269 style='mso-spacerun:yes'> </span>and <!--[if gte msEquation 12]><m:oMath><m:sSubSup><m:sSubSupPr><span 4548 4270 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; … … 4556 4278 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4557 4279 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4558 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4559 type="#_x0000_t75" style='width:4 4pt;height:26pt'>4560 <v:imagedata src="gsasII-phase_files/image0 20.emz" o:title="" chromakey="white"/>4561 </v:shape><![endif]--><![if !vml]><img width= 44 height=264562 src="gsasII-phase_files/image02 1.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>,4280 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4281 type="#_x0000_t75" style='width:43.5pt;height:26.25pt'> 4282 <v:imagedata src="gsasII-phase_files/image019.png" o:title="" chromakey="white"/> 4283 </v:shape><![endif]--><![if !vml]><img width=58 height=35 4284 src="gsasII-phase_files/image020.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 4563 4285 are developed from (those for <!--[if gte msEquation 12]><m:oMath><m:sSubSup><m:sSubSupPr><span 4564 4286 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; … … 4572 4294 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4573 4295 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4574 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4575 type="#_x0000_t75" style='width:45 pt;height:26pt'>4576 <v:imagedata src="gsasII-phase_files/image0 22.emz" o:title="" chromakey="white"/>4577 </v:shape><![endif]--><![if !vml]><img width= 45 height=264578 src="gsasII-phase_files/image01 9.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4296 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4297 type="#_x0000_t75" style='width:45.6pt;height:26.4pt'> 4298 <v:imagedata src="gsasII-phase_files/image017.png" o:title="" chromakey="white"/> 4299 </v:shape><![endif]--><![if !vml]><img width=61 height=35 4300 src="gsasII-phase_files/image018.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4579 4301 style='mso-spacerun:yes'> </span>are similar)</p> 4580 4302 … … 4626 4348 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4627 4349 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4628 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4629 id="_x0000_i1025" type="#_x0000_t75" style='width:158 pt;height:42pt'>4630 <v:imagedata src="gsasII-phase_files/image02 3.emz" o:title="" chromakey="white"/>4631 </v:shape><![endif]--><![if !vml]><img width= 158 height=424632 src="gsasII-phase_files/image02 4.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4350 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4351 id="_x0000_i1025" type="#_x0000_t75" style='width:158.4pt;height:42pt'> 4352 <v:imagedata src="gsasII-phase_files/image021.png" o:title="" chromakey="white"/> 4353 </v:shape><![endif]--><![if !vml]><img width=211 height=56 4354 src="gsasII-phase_files/image022.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4633 4355 4634 4356 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4648 4370 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4649 4371 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4650 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4651 type="#_x0000_t75" style='width:3 1pt;height:26pt'>4652 <v:imagedata src="gsasII-phase_files/image02 5.emz" o:title="" chromakey="white"/>4653 </v:shape><![endif]--><![if !vml]><img width= 31 height=264654 src="gsasII-phase_files/image02 6.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>,4372 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4373 type="#_x0000_t75" style='width:30.8pt;height:26.4pt'> 4374 <v:imagedata src="gsasII-phase_files/image023.png" o:title="" chromakey="white"/> 4375 </v:shape><![endif]--><![if !vml]><img width=41 height=35 4376 src="gsasII-phase_files/image024.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 4655 4377 are defined via a Fourier expansion as</p> 4656 4378 … … 4698 4420 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4699 4421 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4700 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4701 id="_x0000_i1025" type="#_x0000_t75" style='width:1 50pt;height:52pt'>4702 <v:imagedata src="gsasII-phase_files/image02 7.emz" o:title="" chromakey="white"/>4703 </v:shape><![endif]--><![if !vml]><img width=1 50 height=524704 src="gsasII-phase_files/image02 8.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4422 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4423 id="_x0000_i1025" type="#_x0000_t75" style='width:149.2pt;height:52.4pt'> 4424 <v:imagedata src="gsasII-phase_files/image025.png" o:title="" chromakey="white"/> 4425 </v:shape><![endif]--><![if !vml]><img width=199 height=70 4426 src="gsasII-phase_files/image026.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4705 4427 4706 4428 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4751 4473 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4752 4474 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4753 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4754 id="_x0000_i1025" type="#_x0000_t75" style='width:15 4pt;height:52pt'>4755 <v:imagedata src="gsasII-phase_files/image02 9.emz" o:title="" chromakey="white"/>4756 </v:shape><![endif]--><![if !vml]><img width= 154 height=524757 src="gsasII-phase_files/image0 30.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4475 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4476 id="_x0000_i1025" type="#_x0000_t75" style='width:153.6pt;height:52.4pt'> 4477 <v:imagedata src="gsasII-phase_files/image027.png" o:title="" chromakey="white"/> 4478 </v:shape><![endif]--><![if !vml]><img width=205 height=70 4479 src="gsasII-phase_files/image028.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4758 4480 4759 4481 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4772 4494 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4773 4495 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4774 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4775 type="#_x0000_t75" style='width:2 2pt;height:26pt'>4776 <v:imagedata src="gsasII-phase_files/image0 31.emz" o:title="" chromakey="white"/>4777 </v:shape><![endif]--><![if !vml]><img width=2 2 height=264778 src="gsasII-phase_files/image03 2.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>.<span4496 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4497 type="#_x0000_t75" style='width:21.6pt;height:26.4pt'> 4498 <v:imagedata src="gsasII-phase_files/image029.png" o:title="" chromakey="white"/> 4499 </v:shape><![endif]--><![if !vml]><img width=29 height=35 4500 src="gsasII-phase_files/image030.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>.<span 4779 4501 style='mso-spacerun:yes'> </span>These Fourier coefficients are determined so 4780 4502 that the definition </p> … … 4897 4619 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 4898 4620 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 4899 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4900 id="_x0000_i1025" type="#_x0000_t75" style='width:40 9pt;height:55pt'>4901 <v:imagedata src="gsasII-phase_files/image03 3.emz" o:title="" chromakey="white"/>4902 </v:shape><![endif]--><![if !vml]><img width= 409 height=554903 src="gsasII-phase_files/image03 4.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4621 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4622 id="_x0000_i1025" type="#_x0000_t75" style='width:408.8pt;height:55.6pt'> 4623 <v:imagedata src="gsasII-phase_files/image031.png" o:title="" chromakey="white"/> 4624 </v:shape><![endif]--><![if !vml]><img width=545 height=74 4625 src="gsasII-phase_files/image032.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 4904 4626 4905 4627 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 4933 4655 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4934 4656 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4935 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4936 type="#_x0000_t75" style='width:102pt;height:26 pt'>4937 <v:imagedata src="gsasII-phase_files/image03 5.emz" o:title="" chromakey="white"/>4938 </v:shape><![endif]--><![if !vml]><img width=1 02 height=264939 src="gsasII-phase_files/image03 6.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4657 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4658 type="#_x0000_t75" style='width:102pt;height:26.4pt'> 4659 <v:imagedata src="gsasII-phase_files/image033.png" o:title="" chromakey="white"/> 4660 </v:shape><![endif]--><![if !vml]><img width=136 height=35 4661 src="gsasII-phase_files/image034.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4940 4662 style='mso-spacerun:yes'> </span>and <!--[if gte msEquation 12]><m:oMath><m:func><m:funcPr><span 4941 4663 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; … … 4966 4688 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4967 4689 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4968 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4969 type="#_x0000_t75" style='width:9 5pt;height:26pt'>4970 <v:imagedata src="gsasII-phase_files/image03 7.emz" o:title="" chromakey="white"/>4971 </v:shape><![endif]--><![if !vml]><img width= 95 height=264972 src="gsasII-phase_files/image03 8.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4690 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4691 type="#_x0000_t75" style='width:94.4pt;height:26.4pt'> 4692 <v:imagedata src="gsasII-phase_files/image035.png" o:title="" chromakey="white"/> 4693 </v:shape><![endif]--><![if !vml]><img width=126 height=35 4694 src="gsasII-phase_files/image036.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4973 4695 style='mso-spacerun:yes'> </span>are combined depending on the symmetry and the 4974 4696 value of n (or m) along with appropriate normalization coefficients to give the … … 4985 4707 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 4986 4708 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4987 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"4988 type="#_x0000_t75" style='width:4 6pt;height:26pt'>4989 <v:imagedata src="gsasII-phase_files/image03 9.emz" o:title="" chromakey="white"/>4990 </v:shape><![endif]--><![if !vml]><img width= 46 height=264991 src="gsasII-phase_files/image0 40.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4709 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4710 type="#_x0000_t75" style='width:45.6pt;height:26.4pt'> 4711 <v:imagedata src="gsasII-phase_files/image037.png" o:title="" chromakey="white"/> 4712 </v:shape><![endif]--><![if !vml]><img width=61 height=35 4713 src="gsasII-phase_files/image038.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 4992 4714 style='mso-spacerun:yes'> </span>and <!--[if gte msEquation 12]><m:oMath><m:sSubSup><m:sSubSupPr><span 4993 4715 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; … … 5002 4724 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 5003 4725 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 5004 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"5005 type="#_x0000_t75" style='width:47 pt;height:26pt'>5006 <v:imagedata src="gsasII-phase_files/image0 41.emz" o:title="" chromakey="white"/>5007 </v:shape><![endif]--><![if !vml]><img width= 47 height=265008 src="gsasII-phase_files/image04 2.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>.<span4726 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4727 type="#_x0000_t75" style='width:47.2pt;height:26.4pt'> 4728 <v:imagedata src="gsasII-phase_files/image039.png" o:title="" chromakey="white"/> 4729 </v:shape><![endif]--><![if !vml]><img width=63 height=35 4730 src="gsasII-phase_files/image040.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>.<span 5009 4731 style='mso-spacerun:yes'> </span>For cubic crystal symmetry, the term <!--[if gte msEquation 12]><m:oMath><m:sSubSup><m:sSubSupPr><span 5010 4732 style='font-family:"Cambria Math",serif;mso-ascii-font-family:"Cambria Math"; … … 5019 4741 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 5020 4742 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 5021 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"5022 type="#_x0000_t75" style='width:4 6pt;height:26pt'>5023 <v:imagedata src="gsasII-phase_files/image0 43.emz" o:title="" chromakey="white"/>5024 </v:shape><![endif]--><![if !vml]><img width= 46 height=265025 src="gsasII-phase_files/image0 40.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4743 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4744 type="#_x0000_t75" style='width:45.6pt;height:26.4pt'> 4745 <v:imagedata src="gsasII-phase_files/image037.png" o:title="" chromakey="white"/> 4746 </v:shape><![endif]--><![if !vml]><img width=61 height=35 4747 src="gsasII-phase_files/image038.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 5026 4748 style='mso-spacerun:yes'> </span>is obtained directly from the Fourier 5027 4749 expansion</p> … … 5078 4800 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 5079 4801 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 5080 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape4802 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 5081 4803 id="_x0000_i1025" type="#_x0000_t75" style='width:186pt;height:54pt'> 5082 <v:imagedata src="gsasII-phase_files/image04 4.emz" o:title="" chromakey="white"/>5083 </v:shape><![endif]--><![if !vml]><img width= 186 height=545084 src="gsasII-phase_files/image04 5.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4804 <v:imagedata src="gsasII-phase_files/image041.png" o:title="" chromakey="white"/> 4805 </v:shape><![endif]--><![if !vml]><img width=248 height=72 4806 src="gsasII-phase_files/image042.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 5085 4807 5086 4808 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 5095 4817 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 5096 4818 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 5097 top: 3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language:5098 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"5099 type="#_x0000_t75" style='width:18 pt;height:29pt'>5100 <v:imagedata src="gsasII-phase_files/image04 6.emz" o:title="" chromakey="white"/>5101 </v:shape><![endif]--><![if !vml]><img width= 18 height=295102 src="gsasII-phase_files/image04 7.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>,4819 top:4.0pt;mso-text-raise:-4.0pt;mso-ansi-language:EN-US;mso-fareast-language: 4820 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4821 type="#_x0000_t75" style='width:18.8pt;height:29.2pt'> 4822 <v:imagedata src="gsasII-phase_files/image043.png" o:title="" chromakey="white"/> 4823 </v:shape><![endif]--><![if !vml]><img width=25 height=39 4824 src="gsasII-phase_files/image044.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 5103 4825 as tabulated by Bunge (1982). </p> 5104 4826 … … 5116 4838 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 5117 4839 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 5118 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"5119 type="#_x0000_t75" style='width:2 2pt;height:26pt'>5120 <v:imagedata src="gsasII-phase_files/image04 8.emz" o:title="" chromakey="white"/>5121 </v:shape><![endif]--><![if !vml]><img width=2 2 height=265122 src="gsasII-phase_files/image04 9.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>,4840 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4841 type="#_x0000_t75" style='width:21.6pt;height:26.4pt'> 4842 <v:imagedata src="gsasII-phase_files/image045.png" o:title="" chromakey="white"/> 4843 </v:shape><![endif]--><![if !vml]><img width=29 height=35 4844 src="gsasII-phase_files/image046.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]>, 5123 4845 and the three sample orientation angles, <span style='font-family:Symbol'>W</span><sub>s</sub>, 5124 4846 <span style='font-family:Symbol'>C</span><sub>s</sub>, <span style='font-family: … … 5135 4857 "Times New Roman";mso-fareast-theme-font:minor-fareast;position:relative; 5136 4858 top:3.0pt;mso-text-raise:-3.0pt;mso-ansi-language:EN-US;mso-fareast-language: 5137 EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape id="_x0000_i1025"5138 type="#_x0000_t75" style='width:2 2pt;height:26pt'>5139 <v:imagedata src="gsasII-phase_files/image0 50.emz" o:title="" chromakey="white"/>5140 </v:shape><![endif]--><![if !vml]><img width=2 2 height=265141 src="gsasII-phase_files/image04 9.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span4859 EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape id="_x0000_i1025" 4860 type="#_x0000_t75" style='width:21.6pt;height:26.4pt'> 4861 <v:imagedata src="gsasII-phase_files/image045.png" o:title="" chromakey="white"/> 4862 </v:shape><![endif]--><![if !vml]><img width=29 height=35 4863 src="gsasII-phase_files/image046.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]><span 5142 4864 style='mso-spacerun:yes'> </span>and the sample orientation angles <span 5143 4865 style='font-family:Symbol'>W</span><sub>s</sub>, <span style='font-family:Symbol'>C</span><sub>s</sub>, … … 5191 4913 style='font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family: 5192 4914 "Times New Roman";mso-fareast-theme-font:minor-fareast;mso-ansi-language:EN-US; 5193 mso-fareast-language:EN-US;mso-bidi-language: HE'><!--[if gte vml 1]><v:shape5194 id="_x0000_i1025" type="#_x0000_t75" style='width:18 1pt;height:54pt'>5195 <v:imagedata src="gsasII-phase_files/image0 51.emz" o:title="" chromakey="white"/>5196 </v:shape><![endif]--><![if !vml]><img width= 181 height=545197 src="gsasII-phase_files/image0 52.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p>4915 mso-fareast-language:EN-US;mso-bidi-language:AR-SA'><!--[if gte vml 1]><v:shape 4916 id="_x0000_i1025" type="#_x0000_t75" style='width:180.8pt;height:54pt'> 4917 <v:imagedata src="gsasII-phase_files/image047.png" o:title="" chromakey="white"/> 4918 </v:shape><![endif]--><![if !vml]><img width=241 height=72 4919 src="gsasII-phase_files/image048.png" v:shapes="_x0000_i1025"><![endif]></span><![endif]></p> 5198 4920 5199 4921 <p class=gsastext style='margin-top:0in;margin-right:0in;margin-bottom:12.0pt; … … 5230 4952 incident and diffracted beams at equal angles (theta) on opposite sides of the 5231 4953 sample. The sample is frequently spun about its normal to improve powder 5232 statistics and impose cylindrical symmetry on any preferred orientation 5233 (texture). Thus, the diffraction plane (source, diffraction vector & 5234 detector) contains the K-vector which is parallel to the diffraction vector and 5235 <aname="_Hlk74813217"><span style='font-family:Symbol'>W</span>, </a><span4954 statistics and impose cylindrical symmetry on any preferred orientation (texture). 4955 Thus, the diffraction plane (source, diffraction vector & detector) 4956 contains the K-vector which is parallel to the diffraction vector and <a 4957 name="_Hlk74813217"><span style='font-family:Symbol'>W</span>, </a><span 5236 4958 style='mso-bookmark:_Hlk74813217'><span style='font-family:Symbol'>C</span>, </span><span 5237 4959 style='mso-bookmark:_Hlk74813217'><span style='font-family:Symbol'>F = 0.</span></span><span … … 5254 4976 5255 4977 <p class=MsoNormal style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>The 5256 area detector is presumed to be directly behind the sample with the incident 5257 beam somewhere near the center of the detector. The detector axes are defined 5258 (for asynchrotron) with the X-axis toward the synchrotron ring and the Y-axis4978 area detector is presumed to be directly behind the sample with the incident beam 4979 somewhere near the center of the detector. The detector axes are defined (for a 4980 synchrotron) with the X-axis toward the synchrotron ring and the Y-axis 5259 4981 vertical “up”; one views the detector image as if looking from the x-ray 5260 4982 source. The sample is assumed to be a capillary (which may be spun to impose … … 5307 5029 style='font-size:10.0pt;mso-bidi-font-size:12.0pt;font-family:Symbol; 5308 5030 mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span 5309 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5310 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:5311 "Times New Roman"'>as an "Axial pole distribution" which simulates 5312 the intensity of areflection during a phi scan.<o:p></o:p></span></p>5031 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5032 </span></span></span><![endif]><span style='mso-fareast-font-family:"Times New Roman"'>as 5033 an "Axial pole distribution" which simulates the intensity of a 5034 reflection during a phi scan.<o:p></o:p></span></p> 5313 5035 5314 5036 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; … … 5316 5038 style='font-size:10.0pt;mso-bidi-font-size:12.0pt;font-family:Symbol; 5317 5039 mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span 5318 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5319 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:5320 "Times New Roman"'>as a "pole figure," where a projection of the 5321 p robability of finding a pole (<span class=SpellE>hkl</span>) is plotted as a5322 function of sampleorientation.<o:p></o:p></span></p>5040 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5041 </span></span></span><![endif]><span style='mso-fareast-font-family:"Times New Roman"'>as 5042 a "pole figure," where a projection of the probability of finding a 5043 pole (<span class=SpellE>hkl</span>) is plotted as a function of sample 5044 orientation.<o:p></o:p></span></p> 5323 5045 5324 5046 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; … … 5326 5048 style='font-size:10.0pt;mso-bidi-font-size:12.0pt;font-family:Symbol; 5327 5049 mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span 5328 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5329 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:5330 "Times New Roman"'>as <span class=GramE>a</span> "inverse pole 5331 figure," where a projection of the probability of finding all poles (<span 5332 class=SpellE>hkls</span>) isplotted for a selected sample orientation.<o:p></o:p></span></p>5050 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5051 </span></span></span><![endif]><span style='mso-fareast-font-family:"Times New Roman"'>as 5052 <span class=GramE>a</span> "inverse pole figure," where a projection 5053 of the probability of finding all poles (<span class=SpellE>hkls</span>) is 5054 plotted for a selected sample orientation.<o:p></o:p></span></p> 5333 5055 5334 5056 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; … … 5336 5058 style='font-size:10.0pt;mso-bidi-font-size:12.0pt;font-family:Symbol; 5337 5059 mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span 5338 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5339 </span></span></span><![endif]><span dir=LTR></span><span style='mso-fareast-font-family:5340 "Times New Roman"'>or as a "3D pole distribution" that shows the 5341 p robability of finding a pole (<span class=SpellE>hkl</span>) is plotted as a5342 function of sampleorientation. <o:p></o:p></span></p>5060 style='mso-list:Ignore'>·<span style='font:7.0pt "Times New Roman"'> 5061 </span></span></span><![endif]><span style='mso-fareast-font-family:"Times New Roman"'>or 5062 as a "3D pole distribution" that shows the probability of finding a 5063 pole (<span class=SpellE>hkl</span>) is plotted as a function of sample 5064 orientation. <o:p></o:p></span></p> 5343 5065 5344 5066 <p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto; … … 5383 5105 5384 5106 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 5385 text-indent:-.25in;mso-list:l1 3level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5107 text-indent:-.25in;mso-list:l10 level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5386 5108 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 5387 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span5388 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Peak Selection from table</b>: 5389 select individual atoms by a left click of the mouse when pointed at the left5390 most column (atom numbers) of the atom display; hold down the Ctrl key to add 5391 to your selection; a previously selected atom will be deselected; hold down 5392 Shift key to select from last in list selected to current selection. A selected 5393 atom will be highlighted (in grey) and the atoms will be shown in green on the 5394 plot. Selection without the Ctrl key will clear previous selections. A left 5395 click inthe (empty) upper left box will select or deselect all atoms.</p>5109 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5110 style='mso-bidi-font-weight:normal'>Peak Selection from table</b>: select 5111 individual atoms by a left click of the mouse when pointed at the left most 5112 column (atom numbers) of the atom display; hold down the Ctrl key to add to 5113 your selection; a previously selected atom will be deselected; hold down Shift 5114 key to select from last in list selected to current selection. A selected atom 5115 will be highlighted (in grey) and the atoms will be shown in green on the plot. 5116 Selection without the Ctrl key will clear previous selections. A left click in 5117 the (empty) upper left box will select or deselect all atoms.</p> 5396 5118 5397 5119 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5398 auto;text-indent:-.25in;mso-list:l1 3level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a5120 auto;text-indent:-.25in;mso-list:l10 level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a 5399 5121 name=Phase-Pawley><![if !supportLists]><span style='mso-fareast-font-family: 5400 "Times New Roman"'><span style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5401 </span></span></span><![endif]><span dir=LTR></span>Select the <b 5402 style='mso-bidi-font-weight:normal'>mag</b> column – the entries will be sorted 5403 with the largest at the top.</a></p> 5122 "Times New Roman"'><span style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5123 </span></span></span><![endif]>Select the <b style='mso-bidi-font-weight:normal'>mag</b> 5124 column – the entries will be sorted with the largest at the top.</a></p> 5404 5125 5405 5126 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5406 auto;text-indent:-.25in;mso-list:l1 3level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a5127 auto;text-indent:-.25in;mso-list:l10 level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a 5407 5128 name=Pawley><![if !supportLists]><span style='mso-fareast-font-family:"Times New Roman"'><span 5408 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 5409 </span></span></span><![endif]> <span dir=LTR></span>Select the </a><span5410 class=SpellE><span style='mso-bookmark:Pawley'><b style='mso-bidi-font-weight: 5411 normal'>dzero</b></span></span><span style='mso-bookmark:Pawley'> column –the5412 entries will be sorted with thesmallest (distance from origin) at the top.</span></p>5129 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 5130 </span></span></span><![endif]>Select the </a><span class=SpellE><span 5131 style='mso-bookmark:Pawley'><b style='mso-bidi-font-weight:normal'>dzero</b></span></span><span 5132 style='mso-bookmark:Pawley'> column – the entries will be sorted with the 5133 smallest (distance from origin) at the top.</span></p> 5413 5134 5414 5135 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5415 auto;text-indent:-.25in;mso-list:l1 3level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5136 auto;text-indent:-.25in;mso-list:l10 level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5416 5137 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5417 "Times New Roman"'><span style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 5418 </span></span></span><![endif]> <span dir=LTR></span>Select the <span5419 c lass=SpellE><b>dcent</b></span> column – the entries will be sorted with the5420 smallest distance from the unitcell center at the top.</span></p>5138 "Times New Roman"'><span style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 5139 </span></span></span><![endif]>Select the <span class=SpellE><b>dcent</b></span> 5140 column – the entries will be sorted with the smallest distance from the unit 5141 cell center at the top.</span></p> 5421 5142 5422 5143 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5423 auto;text-indent:-.25in;mso-list:l1 3level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5144 auto;text-indent:-.25in;mso-list:l10 level1 lfo16;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5424 5145 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5425 "Times New Roman"'><span style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 5426 </span></span></span><![endif]> <span dir=LTR></span>Menu <b style='mso-bidi-font-weight:5427 normal'>‘Mappeaks<span class=GramE>’ <span style='font-weight:normal'><span5146 "Times New Roman"'><span style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 5147 </span></span></span><![endif]>Menu <b style='mso-bidi-font-weight:normal'>‘Map 5148 peaks<span class=GramE>’ <span style='font-weight:normal'><span 5428 5149 style='mso-spacerun:yes'> </span>–</span></span></b></span></p> 5429 5150 5430 5151 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5431 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5152 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5432 5153 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5433 "Times New Roman"'><span style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 5434 </span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 5435 normal'>Move peaks</b> – this copies selected peaks to the </span><a 5436 href="#Phase-Atoms"><span style='mso-bookmark:Pawley'>Atoms</span><span 5437 style='mso-bookmark:Pawley'></span></a><span style='mso-bookmark:Pawley'> list 5438 and the </span><a href="#_Draw_Atoms"><span style='mso-bookmark:Pawley'>Draw 5439 Atoms</span><span style='mso-bookmark:Pawley'></span></a><span 5154 "Times New Roman"'><span style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 5155 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Move 5156 peaks</b> – this copies selected peaks to the </span><a href="#Phase-Atoms"><span 5157 style='mso-bookmark:Pawley'>Atoms</span><span style='mso-bookmark:Pawley'></span></a><span 5158 style='mso-bookmark:Pawley'> list and the </span><a href="#_Draw_Atoms"><span 5159 style='mso-bookmark:Pawley'>Draw Atoms</span><span style='mso-bookmark:Pawley'></span></a><span 5440 5160 style='mso-bookmark:Pawley'> list. They will be appended to the end of each 5441 5161 list each with the name ‘UNK’ and the atom type as ‘H’. They will also be drawn … … 5447 5167 5448 5168 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5449 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5169 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5450 5170 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5451 "Times New Roman"'><span style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 5452 </span></span></span><![endif]><span dir=LTR></span><span class=GramE><b5453 style='mso-bidi-font-weight:normal'>View point</b></span><b style='mso-bidi-font-weight: 5454 normal'> </b>– this positions the view point (large 3D RGB cross) at the 1<sup>st</sup> 5455 selectedpeak.</span></p>5456 5457 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5458 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5171 "Times New Roman"'><span style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 5172 </span></span></span><![endif]><span class=GramE><b style='mso-bidi-font-weight: 5173 normal'>View point</b></span><b style='mso-bidi-font-weight:normal'> </b>– this 5174 positions the view point (large 3D RGB cross) at the 1<sup>st</sup> selected 5175 peak.</span></p> 5176 5177 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5178 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5459 5179 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5460 "Times New Roman"'><span style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 5461 </span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 5462 normal'>View pt</b>. <b style='mso-bidi-font-weight:normal'>dist</b>. – this 5463 calculates distance from <span class=GramE>view point</span> to all selected 5464 map peaks.</span></p> 5465 5466 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5467 auto;text-indent:-.25in;mso-list:l13 level2 lfo16;tab-stops:list 1.0in'><span 5180 "Times New Roman"'><span style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 5181 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>View pt</b>. 5182 <b style='mso-bidi-font-weight:normal'>dist</b>. – this calculates distance 5183 from <span class=GramE>view point</span> to all selected map peaks.</span></p> 5184 5185 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5186 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5468 5187 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5469 "Times New Roman"'><span style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 5470 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5471 normal'>Hide/Showbonds </b>– toggle display of lines (bonds) between peaks</span></p>5472 5473 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5474 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5188 "Times New Roman"'><span style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 5189 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Hide/Show 5190 bonds </b>– toggle display of lines (bonds) between peaks</span></p> 5191 5192 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5193 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5475 5194 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5476 "Times New Roman"'><span style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 5477 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5478 normal'>Calc <span class=SpellE>dist</span>/ang </b>– if 2 peaks are selected, 5479 this calculates the distance between them. If 3 peaks are selected this 5480 calculates the angle between them; NB: selection order matters. If selection is5481 not 2 or 3 peaksthis is ignored. Output is on the console window.</span></p>5482 5483 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5484 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5195 "Times New Roman"'><span style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 5196 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Calc <span 5197 class=SpellE>dist</span>/ang </b>– if 2 peaks are selected, this calculates the 5198 distance between them. If 3 peaks are selected this calculates the angle 5199 between them; NB: selection order matters. If selection is not 2 or 3 peaks 5200 this is ignored. Output is on the console window.</span></p> 5201 5202 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5203 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5485 5204 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5486 "Times New Roman"'><span style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 5487 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5488 normal'>Equivalent peaks </b>– this selects all peaks related to selection by 5489 s pace group symmetry.</span></p>5490 5491 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5492 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5205 "Times New Roman"'><span style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 5206 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Equivalent 5207 peaks </b>– this selects all peaks related to selection by space group 5208 symmetry.</span></p> 5209 5210 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5211 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5493 5212 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5494 "Times New Roman"'><span style='mso-list:Ignore'>g.<span style='font:7.0pt "Times New Roman"'> 5495 </span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 5496 normal'>Invert peak positions </b>– inversion through cell center of map and 5497 all positions.</span></p> 5498 5499 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5500 auto;text-indent:-.25in;mso-list:l13 level2 lfo16;tab-stops:list 1.0in'><span 5213 "Times New Roman"'><span style='mso-list:Ignore'>g.<span style='font:7.0pt "Times New Roman"'> 5214 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Invert 5215 peak positions </b>– inversion through cell center of map and all positions.</span></p> 5216 5217 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5218 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5501 5219 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5502 "Times New Roman"'><span style='mso-list:Ignore'>h.<span style='font:7.0pt "Times New Roman"'> 5503 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5504 normal'>Roll charge flip map </b>– popup allows shifting of the map & all 5505 peak positionsby unit cell fractions; can be along combinations of axes.</span></p>5506 5507 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5508 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5220 "Times New Roman"'><span style='mso-list:Ignore'>h.<span style='font:7.0pt "Times New Roman"'> 5221 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Roll 5222 charge flip map </b>– popup allows shifting of the map & all peak positions 5223 by unit cell fractions; can be along combinations of axes.</span></p> 5224 5225 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5226 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5509 5227 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5510 "Times New Roman"'><span style='mso-list:Ignore'>i.<span style='font:7.0pt "Times New Roman"'> 5511 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5512 normal'>Unique peaks </b>– this selects only the unique peak positions amongst 5513 those selected; a popup allows selection of atom subset closest to x=0, y=0, 5514 z=0 origin orcenter.</span></p>5515 5516 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5517 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5228 "Times New Roman"'><span style='mso-list:Ignore'>i.<span style='font:7.0pt "Times New Roman"'> 5229 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Unique 5230 peaks </b>– this selects only the unique peak positions amongst those selected; 5231 a popup allows selection of atom subset closest to x=0, y=0, z=0 origin or 5232 center.</span></p> 5233 5234 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5235 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5518 5236 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5519 "Times New Roman"'><span style='mso-list:Ignore'>j.<span style='font:7.0pt "Times New Roman"'> 5520 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5521 normal'>Savepeaks </b>– saves the peak list as a csv file.</span></p>5522 5523 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5524 auto;text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5237 "Times New Roman"'><span style='mso-list:Ignore'>j.<span style='font:7.0pt "Times New Roman"'> 5238 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Save 5239 peaks </b>– saves the peak list as a csv file.</span></p> 5240 5241 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5242 auto;text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5525 5243 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5526 "Times New Roman"'><span style='mso-list:Ignore'>k.<span style='font:7.0pt "Times New Roman"'> 5527 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5528 normal'>Delete peaks </b>– this deletes selected peaks. The shading on the 5529 remaining peaks is changedto reflect any change in the maximum after deletion.</span></p>5244 "Times New Roman"'><span style='mso-list:Ignore'>k.<span style='font:7.0pt "Times New Roman"'> 5245 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Delete 5246 peaks </b>– this deletes selected peaks. The shading on the remaining peaks is changed 5247 to reflect any change in the maximum after deletion.</span></p> 5530 5248 5531 5249 <p class=MsoListParagraphCxSpLast style='margin-left:1.5in;mso-add-space:auto; 5532 text-indent:-.25in;mso-list:l1 3level2 lfo16;tab-stops:list 1.0in'><span5250 text-indent:-.25in;mso-list:l10 level2 lfo16;tab-stops:list 1.0in'><span 5533 5251 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5534 "Times New Roman"'><span style='mso-list:Ignore'>l.<span style='font:7.0pt "Times New Roman"'> 5535 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5536 normal'>Clear peaks </b>– this deletes all the peaks in the map peak list; they 5537 are alsoremoved from the crystal structure drawing plot.</span></p>5252 "Times New Roman"'><span style='mso-list:Ignore'>l.<span style='font:7.0pt "Times New Roman"'> 5253 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Clear 5254 peaks </b>– this deletes all the peaks in the map peak list; they are also 5255 removed from the crystal structure drawing plot.</span></p> 5538 5256 5539 5257 <h4 style='margin-left:.25in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span … … 5552 5270 5553 5271 <p class=MsoListParagraphCxSpFirst style='margin-left:1.0in;mso-add-space:auto; 5554 text-indent:-.25in;mso-list:l 6level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5272 text-indent:-.25in;mso-list:l3 level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5555 5273 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5556 "Times New Roman"'><span style='mso-list:Ignore'>1.<span style='font:7.0pt "Times New Roman"'> 5557 </span></span></span><![endif]> <span dir=LTR></span>Menu <b style='mso-bidi-font-weight:5558 normal'>‘Operations’</b>–</span></p>5559 5560 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5561 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5274 "Times New Roman"'><span style='mso-list:Ignore'>1.<span style='font:7.0pt "Times New Roman"'> 5275 </span></span></span><![endif]>Menu <b style='mso-bidi-font-weight:normal'>‘Operations’</b> 5276 –</span></p> 5277 5278 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5279 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5562 5280 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5563 "Times New Roman"'><span style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 5564 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5565 normal'>Pawley settings </b>– allows setting of Pawley parameters as shown on 5566 the </span><ahref="#_General_Phase_Parameters"><span style='mso-bookmark:Pawley'>General</span><span5281 "Times New Roman"'><span style='mso-list:Ignore'>a.<span style='font:7.0pt "Times New Roman"'> 5282 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Pawley 5283 settings </b>– allows setting of Pawley parameters as shown on the </span><a 5284 href="#_General_Phase_Parameters"><span style='mso-bookmark:Pawley'>General</span><span 5567 5285 style='mso-bookmark:Pawley'></span></a><span style='mso-bookmark:Pawley'> tab.</span></p> 5568 5286 5569 5287 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5570 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5288 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5571 5289 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5572 "Times New Roman"'><span style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 5573 </span></span></span><![endif]><span dir=LTR></span><b style='mso-bidi-font-weight: 5574 normal'>Pawley create</b> – this creates a new set of Pawley reflections, over 5575 writing any preexisting Pawley set. They are generated with d-spacings larger 5576 than the limit set as ‘Pawley <span class=SpellE>dmin</span>’ in the General 5577 tab for this phase. By <span class=GramE>default</span> the refine flags are 5578 not set and the <span class=SpellE>Fsq</span>(<span class=SpellE>hkl</span>) = 5579 100.0.</span></p> 5580 5581 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5582 auto;text-indent:-.25in;mso-list:l10 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5290 "Times New Roman"'><span style='mso-list:Ignore'>b.<span style='font:7.0pt "Times New Roman"'> 5291 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Pawley 5292 create</b> – this creates a new set of Pawley reflections, over writing any 5293 preexisting Pawley set. They are generated with d-spacings larger than the 5294 limit set as ‘Pawley <span class=SpellE>dmin</span>’ in the General tab for 5295 this phase. By <span class=GramE>default</span> the refine flags are not set 5296 and the <span class=SpellE>Fsq</span>(<span class=SpellE>hkl</span>) = 100.0.</span></p> 5297 5298 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5299 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5583 5300 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5584 "Times New Roman"'><span style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 5585 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5586 normal'>Pawleyestimate</b> – this attempts an estimate of <span class=SpellE>Fsq</span>(<span5301 "Times New Roman"'><span style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> 5302 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Pawley 5303 estimate</b> – this attempts an estimate of <span class=SpellE>Fsq</span>(<span 5587 5304 class=SpellE>hkl</span>) from the peak heights of the reflection as seen in the 5588 5305 1<sup>st</sup> powder pattern of those selected in the </span><a href="#_Data"><span … … 5591 5308 5592 5309 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5593 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5310 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5594 5311 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5595 "Times New Roman"'><span style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 5596 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5597 normal'>Pawley update </b>– process Pawley reflection set for negative5598 intensities. These areset to ½ its absolute value for <span class=SpellE>noncentrosymmetric</span>5312 "Times New Roman"'><span style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> 5313 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Pawley 5314 update </b>– process Pawley reflection set for negative intensities. These are 5315 set to ½ its absolute value for <span class=SpellE>noncentrosymmetric</span> 5599 5316 space groups (0.3 otherwise); the refine flag is turned off. One should repeat 5600 5317 Pawley refinement and then do </span><span style='mso-bookmark:Pawley'><b><span … … 5610 5327 5611 5328 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5612 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5329 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5613 5330 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5614 "Times New Roman"'><span style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 5615 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5616 normal'>Refineall </b>– sets all refine flags</span></p>5617 5618 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5619 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5331 "Times New Roman"'><span style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> 5332 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Refine 5333 all </b>– sets all refine flags</span></p> 5334 5335 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5336 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5620 5337 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5621 "Times New Roman"'><span style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 5622 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5623 no rmal'>Refine none </b>– clears all refine flags</span></p>5624 5625 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5626 auto;text-indent:-.25in;mso-list:l 10level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5338 "Times New Roman"'><span style='mso-list:Ignore'>f.<span style='font:7.0pt "Times New Roman"'> 5339 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Refine 5340 none </b>– clears all refine flags</span></p> 5341 5342 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.5in;mso-add-space: 5343 auto;text-indent:-.25in;mso-list:l7 level2 lfo20;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5627 5344 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5628 "Times New Roman"'><span style='mso-list:Ignore'>g.<span style='font:7.0pt "Times New Roman"'> 5629 </span></span></span><![endif]>< span dir=LTR></span><b style='mso-bidi-font-weight:5630 normal'>Toggleselection </b>– toggles all refine flags</span></p>5345 "Times New Roman"'><span style='mso-list:Ignore'>g.<span style='font:7.0pt "Times New Roman"'> 5346 </span></span></span><![endif]><b style='mso-bidi-font-weight:normal'>Toggle 5347 selection </b>– toggles all refine flags</span></p> 5631 5348 5632 5349 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5633 auto;text-indent:-.25in;mso-list:l 6level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span5350 auto;text-indent:-.25in;mso-list:l3 level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><span 5634 5351 style='mso-bookmark:Pawley'><![if !supportLists]><span style='mso-fareast-font-family: 5635 "Times New Roman"'><span style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5636 </span></span></span><![endif]> <span dir=LTR></span>You can change the refine5637 flags either by clicking on the box or by selecting one and then selecting the 5638 column (a single click on the column heading). Then type ‘y’ to set the refine5639 flags or ‘n’ to clear the flags. You should not refine those reflections that5640 fall below the lower limit or above the upper limit of the powder pattern 5641 otherwise you may have asingular matrix error in your Pawley refinement.</span></p>5352 "Times New Roman"'><span style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5353 </span></span></span><![endif]>You can change the refine flags either by clicking 5354 on the box or by selecting one and then selecting the column (a single click on 5355 the column heading). Then type ‘y’ to set the refine flags or ‘n’ to clear the 5356 flags. You should not refine those reflections that fall below the lower limit 5357 or above the upper limit of the powder pattern otherwise you may have a 5358 singular matrix error in your Pawley refinement.</span></p> 5642 5359 5643 5360 <p class=MsoListParagraphCxSpMiddle style='margin-left:1.0in;mso-add-space: 5644 auto;text-indent:-.25in;mso-list:l 6level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5361 auto;text-indent:-.25in;mso-list:l3 level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5645 5362 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>3.<span 5646 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span 5647 dir=LTR></span>You can delete an individual reflection from the Pawley set by 5648 selecting its row (will be highlighted) and then pressing the Delete key (this 5649 is not reversable & only <span class=GramE>deletes</span> the 1<sup>st</sup> 5650 one selected).</p> 5363 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>You 5364 can delete an individual reflection from the Pawley set by selecting its row 5365 (will be highlighted) and then pressing the Delete key (this is not reversable 5366 & only <span class=GramE>deletes</span> the 1<sup>st</sup> one selected).</p> 5651 5367 5652 5368 <p class=MsoListParagraphCxSpLast style='margin-left:1.0in;mso-add-space:auto; 5653 text-indent:-.25in;mso-list:l 6level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5369 text-indent:-.25in;mso-list:l3 level1 lfo18;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5654 5370 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>4.<span 5655 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span5656 dir=LTR></span>You can change the individual <span class=SpellE>Fsq</span>(<span 5657 class=SpellE>hkl</span>) values by selecting it, typing in the new value and 5658 then pressing enter orselecting somewhere else in the table.</p>5371 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>You 5372 can change the individual <span class=SpellE>Fsq</span>(<span class=SpellE>hkl</span>) 5373 values by selecting it, typing in the new value and then pressing enter or 5374 selecting somewhere else in the table.</p> 5659 5375 5660 5376 <h4 style='margin-left:.25in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a … … 5667 5383 Faults-I</a> tutorial. The computations are done by a modified version of <span 5668 5384 class=SpellE>DIFFaX</span> <span class=GramE>by<span style='mso-spacerun:yes'> 5669 </span>M.M.J.</span> Treacy, J.M. <span class=SpellE>Newsam</span> and M.W.5670 Deem, Proc. Roy. Soc. <spanclass=SpellE>Lond</span>. 433A, 499-520 (1991)</p>5385 </span>M.M.J.</span> Treacy, J.M. Newsam and M.W. Deem, Proc. Roy. Soc. <span 5386 class=SpellE>Lond</span>. 433A, 499-520 (1991)</p> 5671 5387 5672 5388 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'>What … … 5674 5390 5675 5391 <p class=MsoListParagraphCxSpFirst style='margin-left:63.8pt;mso-add-space: 5676 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5392 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5677 5393 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>1.<span 5678 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span5679 dir=LTR></span>Menu<b style='mso-bidi-font-weight:normal'>‘Operations’</b> –</p>5394 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>Menu 5395 <b style='mso-bidi-font-weight:normal'>‘Operations’</b> –</p> 5680 5396 5681 5397 <p class=MsoListParagraphCxSpMiddle style='margin-left:99.8pt;mso-add-space: 5682 auto;text-indent:-.25in;mso-list:l 9level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5398 auto;text-indent:-.25in;mso-list:l6 level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5683 5399 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>a.<span 5684 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span5685 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Load from <span 5686 class=SpellE>DIFFaX</span> file – </b><span style='mso-bidi-font-weight:bold'>load 5687 parameters from a <spanclass=SpellE>DIFFaX</span> input file</span></p>5400 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5401 style='mso-bidi-font-weight:normal'>Load from <span class=SpellE>DIFFaX</span> 5402 file – </b><span style='mso-bidi-font-weight:bold'>load parameters from a <span 5403 class=SpellE>DIFFaX</span> input file</span></p> 5688 5404 5689 5405 <p class=MsoListParagraphCxSpMiddle style='margin-left:99.8pt;mso-add-space: 5690 auto;text-indent:-.25in;mso-list:l 9level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5406 auto;text-indent:-.25in;mso-list:l6 level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5691 5407 style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>b.<span 5692 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span5693 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Copy phase cell – </b><span5694 style='mso-bidi-font-weight:bold'>copy the lattice parameters from a selected phase5695 (usually transformed from average unit cell)</span></p>5408 style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5409 style='mso-bidi-font-weight:normal'>Copy phase cell – </b><span 5410 style='mso-bidi-font-weight:bold'>copy the lattice parameters from a selected 5411 phase (usually transformed from average unit cell)</span></p> 5696 5412 5697 5413 <p class=MsoListParagraphCxSpMiddle style='margin-left:99.8pt;mso-add-space: 5698 auto;text-indent:-.25in;mso-list:l 9level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5414 auto;text-indent:-.25in;mso-list:l6 level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5699 5415 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5700 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span5701 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Simulate pattern – </b><span5416 style='mso-list:Ignore'>c.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5417 style='mso-bidi-font-weight:normal'>Simulate pattern – </b><span 5702 5418 style='mso-bidi-font-weight:bold'>run <span class=SpellE>DIFFaX</span> to 5703 5419 simulate selected pattern<o:p></o:p></span></p> 5704 5420 5705 5421 <p class=MsoListParagraphCxSpMiddle style='margin-left:99.8pt;mso-add-space: 5706 auto;text-indent:-.25in;mso-list:l 9level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5422 auto;text-indent:-.25in;mso-list:l6 level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5707 5423 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5708 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span5709 dir=LTR></span><b style='mso-bidi-font-weight:normal'>Fit pattern – </b><span 5710 style='mso-bidi-font-weight:bold'>refine stacking <span class=SpellE>fult</span> 5711 pa rameters to fit observed pattern (not available yet)<o:p></o:p></span></p>5424 style='mso-list:Ignore'>d.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5425 style='mso-bidi-font-weight:normal'>Fit pattern – </b><span style='mso-bidi-font-weight: 5426 bold'>refine stacking <span class=SpellE>fult</span> parameters to fit observed 5427 pattern (not available yet)<o:p></o:p></span></p> 5712 5428 5713 5429 <p class=MsoListParagraphCxSpMiddle style='margin-left:99.8pt;mso-add-space: 5714 auto;text-indent:-.25in;mso-list:l 9level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5430 auto;text-indent:-.25in;mso-list:l6 level2 lfo22;tab-stops:45.8pt 91.6pt list 99.8pt left 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5715 5431 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5716 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]>< span5717 dir=LTR></span><bstyle='mso-bidi-font-weight:normal'>Sequence simulations</b><span5432 style='mso-list:Ignore'>e.<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><b 5433 style='mso-bidi-font-weight:normal'>Sequence simulations</b><span 5718 5434 style='mso-bidi-font-weight:bold'> – do a sequence of simulations incrementing 5719 5435 a selected stacking fault parameter<o:p></o:p></span></p> 5720 5436 5721 5437 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5722 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5438 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5723 5439 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5724 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5725 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight: 5726 bold'>Show a plot of the 2D diffraction pattern for the stacking model – look 5727 for streaks.<o:p></o:p></span></p> 5440 style='mso-list:Ignore'>2.<span style='font:7.0pt "Times New Roman"'> 5441 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Show a 5442 plot of the 2D diffraction pattern for the stacking model – look for streaks.<o:p></o:p></span></p> 5728 5443 5729 5444 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5730 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5445 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5731 5446 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5732 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 5733 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5734 bold'>SelectLaue symmetry<o:p></o:p></span></p>5447 style='mso-list:Ignore'>3.<span style='font:7.0pt "Times New Roman"'> 5448 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Select 5449 Laue symmetry<o:p></o:p></span></p> 5735 5450 5736 5451 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5737 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5452 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5738 5453 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5739 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 5740 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5741 bold'>Reference unit cell – filled by Copy phase cell and is the stacking fault 5742 blockdimensions (NB: refine inactive)<o:p></o:p></span></p>5454 style='mso-list:Ignore'>4.<span style='font:7.0pt "Times New Roman"'> 5455 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Reference 5456 unit cell – filled by Copy phase cell and is the stacking fault block 5457 dimensions (NB: refine inactive)<o:p></o:p></span></p> 5743 5458 5744 5459 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5745 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5460 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5746 5461 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5747 style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 5748 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5749 bold'>Layer width (a & b) – outer dimensions of crystallite; used for 5750 broadeningcalculations (NB: refine inactive)<o:p></o:p></span></p>5462 style='mso-list:Ignore'>5.<span style='font:7.0pt "Times New Roman"'> 5463 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Layer 5464 width (a & b) – outer dimensions of crystallite; used for broadening 5465 calculations (NB: refine inactive)<o:p></o:p></span></p> 5751 5466 5752 5467 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5753 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5468 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5754 5469 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5755 style='mso-list:Ignore'>6.<span style='font:7.0pt "Times New Roman"'> 5756 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5757 bold'>Next are descriptions of the layers to be used in the calculations. They 5758 can be created atom-by-atom or imported from another GSAS-II <span 5759 class=SpellE>gpx</span> file. If a layer is already present, then the new layer 5760 can be the same; giveit a different name.<o:p></o:p></span></p>5470 style='mso-list:Ignore'>6.<span style='font:7.0pt "Times New Roman"'> 5471 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Next are 5472 descriptions of the layers to be used in the calculations. They can be created 5473 atom-by-atom or imported from another GSAS-II <span class=SpellE>gpx</span> 5474 file. If a layer is already present, then the new layer can be the same; give 5475 it a different name.<o:p></o:p></span></p> 5761 5476 5762 5477 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5763 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5478 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5764 5479 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5765 style='mso-list:Ignore'>7.<span style='font:7.0pt "Times New Roman"'> 5766 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5767 bold'>The layers stack according to probability rules – these are presentedin5768 t ables in the next section<o:p></o:p></span></p>5480 style='mso-list:Ignore'>7.<span style='font:7.0pt "Times New Roman"'> 5481 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>The 5482 layers stack according to probability rules – these are presented in tables in 5483 the next section<o:p></o:p></span></p> 5769 5484 5770 5485 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5771 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5486 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5772 5487 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5773 style='mso-list:Ignore'>8.<span style='font:7.0pt "Times New Roman"'> 5774 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5775 bold'>You can specify specific layering sequences as a sequence of layer 5776 numbers (begins with1).<o:p></o:p></span></p>5488 style='mso-list:Ignore'>8.<span style='font:7.0pt "Times New Roman"'> 5489 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>You can 5490 specify specific layering sequences as a sequence of layer numbers (begins with 5491 1).<o:p></o:p></span></p> 5777 5492 5778 5493 <p class=MsoListParagraphCxSpMiddle style='margin-left:63.8pt;mso-add-space: 5779 auto;text-indent:-.25in;mso-list:l 9level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span5494 auto;text-indent:-.25in;mso-list:l6 level1 lfo22;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><![if !supportLists]><span 5780 5495 style='mso-fareast-font-family:"Times New Roman";mso-bidi-font-weight:bold'><span 5781 style='mso-list:Ignore'>9.<span style='font:7.0pt "Times New Roman"'> 5782 </span></span></span><![endif]><span dir=LTR></span><span style='mso-bidi-font-weight:5783 bold'>Finally, you can set the type of sequence and the number of layers to use5784 in thesimulation<o:p></o:p></span></p>5496 style='mso-list:Ignore'>9.<span style='font:7.0pt "Times New Roman"'> 5497 </span></span></span><![endif]><span style='mso-bidi-font-weight:bold'>Finally, 5498 you can set the type of sequence and the number of layers to use in the 5499 simulation<o:p></o:p></span></p> 5785 5500 5786 5501 <p class=MsoListParagraphCxSpLast style='margin-left:63.8pt;mso-add-space:auto; … … 5802 5517 can I do here?</h5> 5803 5518 5519 <h5 style='margin-left:.5in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><o:p> </o:p></h5> 5520 5804 5521 <h4 style='margin-left:.25in;tab-stops:45.8pt 91.6pt 137.4pt 183.2pt 229.0pt 274.8pt 320.6pt 366.4pt 412.2pt 458.0pt 503.8pt 549.6pt 595.4pt 641.2pt 687.0pt 732.8pt'><a 5805 5522 name="Phase-MC/SA">MC/SA</a></h4> … … 5812 5529 mso-no-proof:yes'> 5813 5530 5814 <hr size= 4width="100%" align=center>5531 <hr size=3 width="100%" align=center> 5815 5532 5816 5533 </span></div> … … 5819 5536 style='mso-fareast-font-family:"Times New Roman";mso-no-proof:yes'> 5820 5537 5821 <hr size= 4width="100%" align=center>5538 <hr size=3 width="100%" align=center> 5822 5539 5823 5540 </span></div>
Note: See TracChangeset
for help on using the changeset viewer.