1 | # -*- coding: utf-8 -*- |
---|
2 | #GSASIIpwdGUI - powder data display routines |
---|
3 | ########### SVN repository information ################### |
---|
4 | # $Date: 2013-10-15 20:01:21 +0000 (Tue, 15 Oct 2013) $ |
---|
5 | # $Author: vondreele $ |
---|
6 | # $Revision: 1107 $ |
---|
7 | # $URL: trunk/GSASIIpwdGUI.py $ |
---|
8 | # $Id: GSASIIpwdGUI.py 1107 2013-10-15 20:01:21Z vondreele $ |
---|
9 | ########### SVN repository information ################### |
---|
10 | ''' |
---|
11 | *GSASIIpwdGUI: Powder Pattern GUI routines* |
---|
12 | ------------------------------------------- |
---|
13 | |
---|
14 | Used to define GUI controls for the routines that interact |
---|
15 | with the powder histogram (PWDR) data tree items. |
---|
16 | |
---|
17 | ''' |
---|
18 | import sys |
---|
19 | import os.path |
---|
20 | import wx |
---|
21 | import wx.grid as wg |
---|
22 | import numpy as np |
---|
23 | import numpy.ma as ma |
---|
24 | import math |
---|
25 | import time |
---|
26 | import copy |
---|
27 | import random as ran |
---|
28 | import cPickle |
---|
29 | import GSASIIpath |
---|
30 | GSASIIpath.SetVersionNumber("$Revision: 1107 $") |
---|
31 | import GSASIImath as G2mth |
---|
32 | import GSASIIpwd as G2pwd |
---|
33 | import GSASIIIO as G2IO |
---|
34 | import GSASIIlattice as G2lat |
---|
35 | import GSASIIspc as G2spc |
---|
36 | import GSASIIindex as G2indx |
---|
37 | import GSASIIplot as G2plt |
---|
38 | import GSASIIgrid as G2gd |
---|
39 | import GSASIIElemGUI as G2elemGUI |
---|
40 | import GSASIIElem as G2elem |
---|
41 | VERY_LIGHT_GREY = wx.Colour(235,235,235) |
---|
42 | # trig functions in degrees |
---|
43 | sind = lambda x: math.sin(x*math.pi/180.) |
---|
44 | tand = lambda x: math.tan(x*math.pi/180.) |
---|
45 | cosd = lambda x: math.cos(x*math.pi/180.) |
---|
46 | asind = lambda x: 180.*math.asin(x)/math.pi |
---|
47 | |
---|
48 | def IsHistogramInAnyPhase(G2frame,histoName): |
---|
49 | 'Needs a doc string' |
---|
50 | phases = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,'Phases') |
---|
51 | if phases: |
---|
52 | item, cookie = G2frame.PatternTree.GetFirstChild(phases) |
---|
53 | while item: |
---|
54 | data = G2frame.PatternTree.GetItemPyData(item) |
---|
55 | histoList = data['Histograms'].keys() |
---|
56 | if histoName in histoList: |
---|
57 | return True |
---|
58 | item, cookie = G2frame.PatternTree.GetNextChild(phases, cookie) |
---|
59 | return False |
---|
60 | else: |
---|
61 | return False |
---|
62 | |
---|
63 | def SetDefaultSample(): |
---|
64 | 'Needs a doc string' |
---|
65 | return {'ranId':ran.randint(0,sys.maxint), |
---|
66 | 'Scale':[1.0,True],'Type':'Debye-Scherrer','Absorption':[0.0,False], |
---|
67 | 'DisplaceX':[0.0,False],'DisplaceY':[0.0,False],'Diffuse':[], |
---|
68 | 'Temperature':300.,'Pressure':1.0,'Humidity':0.0, |
---|
69 | 'Voltage':0.0,'Force':0.0,'Gonio. radius':200.0, |
---|
70 | 'Omega':0.0,'Chi':0.0,'Phi':0.0} |
---|
71 | |
---|
72 | ################################################################################ |
---|
73 | ##### Powder Peaks |
---|
74 | ################################################################################ |
---|
75 | |
---|
76 | def UpdatePeakGrid(G2frame, data): |
---|
77 | '''respond to selection of PWDR powder peaks data tree item. |
---|
78 | ''' |
---|
79 | if G2frame.dataDisplay: |
---|
80 | G2frame.dataFrame.Clear() |
---|
81 | |
---|
82 | def OnAutoSearch(event): |
---|
83 | PatternId = G2frame.PatternId |
---|
84 | PickId = G2frame.PickId |
---|
85 | limits = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Limits'))[1] |
---|
86 | inst,inst2 = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Instrument Parameters')) |
---|
87 | profile = G2frame.PatternTree.GetItemPyData(PatternId)[1] |
---|
88 | x0 = profile[0] |
---|
89 | iBeg = np.searchsorted(x0,limits[0]) |
---|
90 | iFin = np.searchsorted(x0,limits[1]) |
---|
91 | x = x0[iBeg:iFin] |
---|
92 | y0 = profile[1][iBeg:iFin] |
---|
93 | y1 = copy.copy(y0) |
---|
94 | ysig = np.std(y1) |
---|
95 | offset = [-1,1] |
---|
96 | ymask = ma.array(y0,mask=(y0<ysig)) |
---|
97 | for off in offset: |
---|
98 | ymask = ma.array(ymask,mask=(ymask-np.roll(y0,off)<=0.)) |
---|
99 | indx = ymask.nonzero() |
---|
100 | mags = ymask[indx] |
---|
101 | poss = x[indx] |
---|
102 | refs = zip(poss,mags) |
---|
103 | refs = G2mth.sortArray(refs,0,reverse=True) |
---|
104 | for i,ref1 in enumerate(refs): |
---|
105 | for ref2 in refs[i+1:]: |
---|
106 | if abs(ref2[0]-ref1[0]) < 0.1*G2pwd.getFWHM(ref1[0],inst): |
---|
107 | del(refs[i]) |
---|
108 | refs = G2mth.sortArray(refs,1,reverse=True) |
---|
109 | for pos,mag in refs: |
---|
110 | data.append(G2mth.setPeakparms(inst,inst2,pos,mag)) |
---|
111 | UpdatePeakGrid(G2frame,data) |
---|
112 | G2plt.PlotPatterns(G2frame) |
---|
113 | |
---|
114 | def OnUnDo(event): |
---|
115 | DoUnDo() |
---|
116 | G2frame.dataFrame.UnDo.Enable(False) |
---|
117 | |
---|
118 | def DoUnDo(): |
---|
119 | print 'Undo last refinement' |
---|
120 | file = open(G2frame.undofile,'rb') |
---|
121 | PatternId = G2frame.PatternId |
---|
122 | for item in ['Background','Instrument Parameters','Peak List']: |
---|
123 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, item),cPickle.load(file)) |
---|
124 | if G2frame.dataDisplay.GetName() == item: |
---|
125 | if item == 'Background': |
---|
126 | UpdateBackground(G2frame,G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, item))) |
---|
127 | elif item == 'Instrument Parameters': |
---|
128 | UpdateInstrumentGrid(G2frame,G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, item))) |
---|
129 | elif item == 'Peak List': |
---|
130 | UpdatePeakGrid(G2frame,G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, item))) |
---|
131 | print item,' recovered' |
---|
132 | file.close() |
---|
133 | |
---|
134 | def SaveState(): |
---|
135 | G2frame.undofile = os.path.join(G2frame.dirname,'GSASII.save') |
---|
136 | file = open(G2frame.undofile,'wb') |
---|
137 | PatternId = G2frame.PatternId |
---|
138 | for item in ['Background','Instrument Parameters','Peak List']: |
---|
139 | cPickle.dump(G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId,item)),file,1) |
---|
140 | file.close() |
---|
141 | G2frame.dataFrame.UnDo.Enable(True) |
---|
142 | |
---|
143 | def OnLSQPeakFit(event): |
---|
144 | if not G2frame.GSASprojectfile: #force a save of the gpx file so SaveState can wirte in the same directory |
---|
145 | G2frame.OnFileSaveas(event) |
---|
146 | OnPeakFit('LSQ') |
---|
147 | |
---|
148 | def OnOneCycle(event): |
---|
149 | OnPeakFit('LSQ',oneCycle=True) |
---|
150 | |
---|
151 | def OnClearPeaks(event): |
---|
152 | dlg = wx.MessageDialog(G2frame,'Delete all peaks?','Clear peak list',wx.OK|wx.CANCEL) |
---|
153 | try: |
---|
154 | if dlg.ShowModal() == wx.ID_OK: |
---|
155 | peaks = [] |
---|
156 | finally: |
---|
157 | dlg.Destroy() |
---|
158 | UpdatePeakGrid(G2frame,peaks) |
---|
159 | G2plt.PlotPatterns(G2frame) |
---|
160 | |
---|
161 | def OnPeakFit(FitPgm,oneCycle=False): |
---|
162 | SaveState() |
---|
163 | controls = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.root, 'Controls')) |
---|
164 | if not controls: |
---|
165 | controls = {'deriv type':'analytic','min dM/M':0.0001,} #fill in defaults if needed |
---|
166 | print 'Peak Fitting with '+controls['deriv type']+' derivatives:' |
---|
167 | PatternId = G2frame.PatternId |
---|
168 | PickId = G2frame.PickId |
---|
169 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Peak List')) |
---|
170 | if not peaks: |
---|
171 | G2frame.ErrorDialog('No peaks!','Nothing to fit!') |
---|
172 | return |
---|
173 | background = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Background')) |
---|
174 | limits = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Limits'))[1] |
---|
175 | inst,inst2 = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Instrument Parameters')) |
---|
176 | data = G2frame.PatternTree.GetItemPyData(PatternId)[1] |
---|
177 | wx.BeginBusyCursor() |
---|
178 | dlg = wx.ProgressDialog('Residual','Peak fit Rwp = ',101.0, |
---|
179 | style = wx.PD_ELAPSED_TIME|wx.PD_AUTO_HIDE|wx.PD_REMAINING_TIME|wx.PD_CAN_ABORT) |
---|
180 | screenSize = wx.ClientDisplayRect() |
---|
181 | Size = dlg.GetSize() |
---|
182 | dlg.SetPosition(wx.Point(screenSize[2]-Size[0]-305,screenSize[1]+5)) |
---|
183 | try: |
---|
184 | G2pwd.DoPeakFit(FitPgm,peaks,background,limits,inst,inst2,data,oneCycle,controls,dlg) |
---|
185 | finally: |
---|
186 | wx.EndBusyCursor() |
---|
187 | UpdatePeakGrid(G2frame,peaks) |
---|
188 | G2plt.PlotPatterns(G2frame) |
---|
189 | print 'finished' |
---|
190 | return |
---|
191 | |
---|
192 | def OnResetSigGam(event): |
---|
193 | PatternId = G2frame.PatternId |
---|
194 | PickId = G2frame.PickId |
---|
195 | Inst,Inst2 = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Instrument Parameters')) |
---|
196 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Peak List')) |
---|
197 | if not peaks: |
---|
198 | G2frame.ErrorDialog('No peaks!','Nothing to do!') |
---|
199 | return |
---|
200 | newpeaks = [] |
---|
201 | for peak in peaks: |
---|
202 | newpeaks.append(G2mth.setPeakparms(Inst,Inst2,peak[0],peak[2])) |
---|
203 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Peak List'),newpeaks) |
---|
204 | UpdatePeakGrid(G2frame,newpeaks) |
---|
205 | |
---|
206 | def RefreshPeakGrid(event): |
---|
207 | r,c = event.GetRow(),event.GetCol() |
---|
208 | |
---|
209 | event.StopPropagation() |
---|
210 | data = G2frame.PeakTable.GetData() |
---|
211 | T = [] |
---|
212 | for peak in data:T.append(peak[0]) |
---|
213 | D = dict(zip(T,data)) |
---|
214 | T.sort() |
---|
215 | X = [] |
---|
216 | for key in T: X.append(D[key]) |
---|
217 | data = X |
---|
218 | |
---|
219 | def setBackgroundColors(): |
---|
220 | for r in range(G2frame.dataDisplay.GetNumberRows()): |
---|
221 | for c in range(G2frame.dataDisplay.GetNumberCols()): |
---|
222 | if G2frame.dataDisplay.GetColLabelValue(c) in ['position','intensity','alpha','beta','sigma','gamma']: |
---|
223 | if float(G2frame.dataDisplay.GetCellValue(r,c)) < 0.: |
---|
224 | G2frame.dataDisplay.SetCellBackgroundColour(r,c,wx.RED) |
---|
225 | else: |
---|
226 | G2frame.dataDisplay.SetCellBackgroundColour(r,c,wx.WHITE) |
---|
227 | |
---|
228 | def KeyEditPeakGrid(event): |
---|
229 | rowList = G2frame.dataDisplay.GetSelectedRows() |
---|
230 | colList = G2frame.dataDisplay.GetSelectedCols() |
---|
231 | selectList = G2frame.dataDisplay.GetSelectedCells() |
---|
232 | data = G2frame.PatternTree.GetItemPyData(G2frame.PickId) |
---|
233 | if event.GetKeyCode() == wx.WXK_RETURN: |
---|
234 | event.Skip(True) |
---|
235 | elif event.GetKeyCode() == wx.WXK_CONTROL: |
---|
236 | event.Skip(True) |
---|
237 | elif event.GetKeyCode() == wx.WXK_SHIFT: |
---|
238 | event.Skip(True) |
---|
239 | elif rowList: |
---|
240 | G2frame.dataDisplay.ClearSelection() |
---|
241 | if event.GetKeyCode() == wx.WXK_DELETE: |
---|
242 | G2frame.dataDisplay.ClearGrid() |
---|
243 | rowList.sort() |
---|
244 | rowList.reverse() |
---|
245 | nDel = 0 |
---|
246 | for row in rowList: |
---|
247 | G2frame.PeakTable.DeleteRow(row) |
---|
248 | nDel += 1 |
---|
249 | if nDel: |
---|
250 | msg = wg.GridTableMessage(G2frame.PeakTable, |
---|
251 | wg.GRIDTABLE_NOTIFY_ROWS_DELETED,0,nDel) |
---|
252 | G2frame.dataDisplay.ProcessTableMessage(msg) |
---|
253 | data = G2frame.PeakTable.GetData() |
---|
254 | G2frame.PatternTree.SetItemPyData(G2frame.PickId,data[:-nDel]) |
---|
255 | G2frame.dataDisplay.ForceRefresh() |
---|
256 | setBackgroundColors() |
---|
257 | if not len(G2frame.PatternTree.GetItemPyData(G2frame.PickId)): |
---|
258 | G2frame.dataFrame.PeakFit.Enable(False) |
---|
259 | |
---|
260 | elif colList: |
---|
261 | G2frame.dataDisplay.ClearSelection() |
---|
262 | key = event.GetKeyCode() |
---|
263 | for col in colList: |
---|
264 | if G2frame.PeakTable.GetTypeName(0,col) == wg.GRID_VALUE_BOOL: |
---|
265 | if key == 89: #'Y' |
---|
266 | for row in range(G2frame.PeakTable.GetNumberRows()): data[row][col]=True |
---|
267 | elif key == 78: #'N' |
---|
268 | for row in range(G2frame.PeakTable.GetNumberRows()): data[row][col]=False |
---|
269 | elif selectList: |
---|
270 | G2frame.dataDisplay.ClearSelection() |
---|
271 | key = event.GetKeyCode() |
---|
272 | for row,col in selectList: |
---|
273 | if G2frame.PeakTable.GetTypeName(row,col) == wg.GRID_VALUE_BOOL: |
---|
274 | if key == 89: #'Y' |
---|
275 | data[row][col]=True |
---|
276 | elif key == 78: #'N' |
---|
277 | data[row][col]=False |
---|
278 | G2plt.PlotPatterns(G2frame) |
---|
279 | |
---|
280 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.PeakMenu) |
---|
281 | if not G2frame.dataFrame.GetStatusBar(): |
---|
282 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
283 | Status.SetStatusText('Global refine: select refine column & press Y or N') |
---|
284 | G2frame.Bind(wx.EVT_MENU, OnAutoSearch, id=G2gd.wxID_AUTOSEARCH) |
---|
285 | G2frame.Bind(wx.EVT_MENU, OnUnDo, id=G2gd.wxID_UNDO) |
---|
286 | G2frame.Bind(wx.EVT_MENU, OnLSQPeakFit, id=G2gd.wxID_LSQPEAKFIT) |
---|
287 | G2frame.Bind(wx.EVT_MENU, OnOneCycle, id=G2gd.wxID_LSQONECYCLE) |
---|
288 | G2frame.Bind(wx.EVT_MENU, OnClearPeaks, id=G2gd.wxID_CLEARPEAKS) |
---|
289 | G2frame.Bind(wx.EVT_MENU, OnResetSigGam, id=G2gd.wxID_RESETSIGGAM) |
---|
290 | G2frame.dataFrame.PeakFit.Enable(False) |
---|
291 | if data: |
---|
292 | G2frame.dataFrame.PeakFit.Enable(True) |
---|
293 | G2frame.dataFrame.PFOneCycle.Enable(True) |
---|
294 | G2frame.PickTable = [] |
---|
295 | rowLabels = [] |
---|
296 | PatternId = G2frame.PatternId |
---|
297 | Inst = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Instrument Parameters'))[0] |
---|
298 | for i in range(len(data)): rowLabels.append(str(i+1)) |
---|
299 | if 'C' in Inst['Type'][0]: |
---|
300 | colLabels = ['position','refine','intensity','refine','sigma','refine','gamma','refine'] |
---|
301 | Types = [wg.GRID_VALUE_FLOAT+':10,4',wg.GRID_VALUE_BOOL, |
---|
302 | wg.GRID_VALUE_FLOAT+':10,1',wg.GRID_VALUE_BOOL, |
---|
303 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL, |
---|
304 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL] |
---|
305 | else: |
---|
306 | colLabels = ['position','refine','intensity','refine','alpha','refine', |
---|
307 | 'beta','refine','sigma','refine','gamma','refine'] |
---|
308 | Types = [wg.GRID_VALUE_FLOAT+':10,1',wg.GRID_VALUE_BOOL, |
---|
309 | wg.GRID_VALUE_FLOAT+':10,4',wg.GRID_VALUE_BOOL, |
---|
310 | wg.GRID_VALUE_FLOAT+':10,4',wg.GRID_VALUE_BOOL, |
---|
311 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL, |
---|
312 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL, |
---|
313 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL] |
---|
314 | T = [] |
---|
315 | for peak in data: |
---|
316 | T.append(peak[0]) |
---|
317 | D = dict(zip(T,data)) |
---|
318 | T.sort() |
---|
319 | X = [] |
---|
320 | for key in T: X.append(D[key]) |
---|
321 | data = X |
---|
322 | G2frame.PatternTree.SetItemPyData(G2frame.PickId,data) |
---|
323 | G2frame.PeakTable = G2gd.Table(data,rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
324 | G2frame.dataFrame.SetLabel('Peak List') |
---|
325 | G2frame.dataDisplay = G2gd.GSGrid(parent=G2frame.dataFrame) |
---|
326 | G2frame.dataDisplay.SetTable(G2frame.PeakTable, True) |
---|
327 | setBackgroundColors() |
---|
328 | G2frame.dataDisplay.Bind(wg.EVT_GRID_CELL_CHANGE, RefreshPeakGrid) |
---|
329 | G2frame.dataDisplay.Bind(wx.EVT_KEY_DOWN, KeyEditPeakGrid) |
---|
330 | G2frame.dataDisplay.SetMargins(0,0) |
---|
331 | G2frame.dataDisplay.AutoSizeColumns(False) |
---|
332 | G2frame.dataFrame.setSizePosLeft([535,350]) |
---|
333 | |
---|
334 | ################################################################################ |
---|
335 | ##### Background |
---|
336 | ################################################################################ |
---|
337 | |
---|
338 | def UpdateBackground(G2frame,data): |
---|
339 | '''respond to selection of PWDR background data tree item. |
---|
340 | ''' |
---|
341 | if len(data) < 2: #add Debye diffuse & peaks scattering here |
---|
342 | data.append({'nDebye':0,'debyeTerms':[],'nPeaks':0,'peaksList':[]}) |
---|
343 | if 'nPeaks' not in data[1]: |
---|
344 | data[1].update({'nPeaks':0,'peaksList':[]}) |
---|
345 | ValObj = {} |
---|
346 | |
---|
347 | def OnBackFlagCopy(event): |
---|
348 | flag = data[0][1] |
---|
349 | backDict = data[-1] |
---|
350 | if backDict['nDebye']: |
---|
351 | DBflags = [] |
---|
352 | for term in backDict['debyeTerms']: |
---|
353 | DBflags.append(term[1::2]) |
---|
354 | if backDict['nPeaks']: |
---|
355 | PKflags = [] |
---|
356 | for term in backDict['peaksList']: |
---|
357 | PKflags.append(term[1::2]) |
---|
358 | histList = ['All',]+G2gd.GetPatternTreeDataNames(G2frame,['PWDR',]) |
---|
359 | copyList = [] |
---|
360 | dlg = wx.MultiChoiceDialog(G2frame, |
---|
361 | 'Copy refinement flags to which histograms?', 'Copy flags', |
---|
362 | histList, wx.CHOICEDLG_STYLE) |
---|
363 | try: |
---|
364 | if dlg.ShowModal() == wx.ID_OK: |
---|
365 | result = dlg.GetSelections() |
---|
366 | for i in result: |
---|
367 | copyList.append(histList[i]) |
---|
368 | if 'All' in copyList: |
---|
369 | copyList = histList[1:] |
---|
370 | for item in copyList: |
---|
371 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
372 | backData = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Background')) |
---|
373 | backData[0][1] = copy.copy(flag) |
---|
374 | bkDict = backData[-1] |
---|
375 | if bkDict['nDebye'] == backDict['nDebye']: |
---|
376 | for i,term in enumerate(bkDict['debyeTerms']): |
---|
377 | term[1::2] = copy.copy(DBflags[i]) |
---|
378 | if bkDict['nPeaks'] == backDict['nPeaks']: |
---|
379 | for i,term in enumerate(bkDict['peaksList']): |
---|
380 | term[1::2] = copy.copy(PKflags[i]) |
---|
381 | finally: |
---|
382 | dlg.Destroy() |
---|
383 | |
---|
384 | def OnBackCopy(event): |
---|
385 | histList = ['All',]+G2gd.GetPatternTreeDataNames(G2frame,['PWDR',]) |
---|
386 | copyList = [] |
---|
387 | dlg = wx.MultiChoiceDialog(G2frame, |
---|
388 | 'Copy parameters to which histograms?', 'Copy parameters', |
---|
389 | histList, wx.CHOICEDLG_STYLE) |
---|
390 | try: |
---|
391 | if dlg.ShowModal() == wx.ID_OK: |
---|
392 | result = dlg.GetSelections() |
---|
393 | for i in result: |
---|
394 | copyList.append(histList[i]) |
---|
395 | if 'All' in copyList: |
---|
396 | copyList = histList[1:] |
---|
397 | for item in copyList: |
---|
398 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
399 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Background'), |
---|
400 | copy.copy(data)) |
---|
401 | finally: |
---|
402 | dlg.Destroy() |
---|
403 | |
---|
404 | def BackSizer(): |
---|
405 | |
---|
406 | def OnNewType(event): |
---|
407 | data[0][0] = bakType.GetValue() |
---|
408 | |
---|
409 | def OnBakRef(event): |
---|
410 | data[0][1] = bakRef.GetValue() |
---|
411 | |
---|
412 | def OnBakTerms(event): |
---|
413 | data[0][2] = int(bakTerms.GetValue()) |
---|
414 | M = len(data[0]) |
---|
415 | N = data[0][2]+3 |
---|
416 | item = data[0] |
---|
417 | if N > M: #add terms |
---|
418 | for i in range(M,N): |
---|
419 | item.append(0.0) |
---|
420 | elif N < M: #delete terms |
---|
421 | for i in range(N,M): |
---|
422 | del(item[-1]) |
---|
423 | G2frame.PatternTree.SetItemPyData(BackId,data) |
---|
424 | wx.CallAfter(UpdateBackground,G2frame,data) |
---|
425 | |
---|
426 | def OnBakVal(event): |
---|
427 | Obj = event.GetEventObject() |
---|
428 | item = ValObj[Obj.GetId()][0] |
---|
429 | try: |
---|
430 | value = float(Obj.GetValue()) |
---|
431 | except ValueError: |
---|
432 | value = data[0][item] |
---|
433 | data[0][item] = value |
---|
434 | Obj.SetValue('%10.4f'%(value)) |
---|
435 | |
---|
436 | backSizer = wx.BoxSizer(wx.VERTICAL) |
---|
437 | topSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
438 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Background function: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
439 | bakType = wx.ComboBox(G2frame.dataDisplay,value=data[0][0], |
---|
440 | choices=Choices,style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
441 | bakType.Bind(wx.EVT_COMBOBOX, OnNewType) |
---|
442 | topSizer.Add(bakType) |
---|
443 | topSizer.Add((5,0),0) |
---|
444 | bakRef = wx.CheckBox(G2frame.dataDisplay,label=' Refine?') |
---|
445 | bakRef.SetValue(bool(data[0][1])) |
---|
446 | bakRef.Bind(wx.EVT_CHECKBOX, OnBakRef) |
---|
447 | topSizer.Add(bakRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
448 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' No. coeff.: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
449 | bakTerms = wx.ComboBox(G2frame.dataDisplay,-1,value=str(data[0][2]),choices=[str(i+1) for i in range(36)], |
---|
450 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
451 | bakTerms.Bind(wx.EVT_COMBOBOX,OnBakTerms) |
---|
452 | topSizer.Add(bakTerms,0,wx.ALIGN_CENTER_VERTICAL) |
---|
453 | topSizer.Add((5,0),0) |
---|
454 | backSizer.Add(topSizer) |
---|
455 | backSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Background coefficients:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
456 | bakSizer = wx.FlexGridSizer(1,5,5,5) |
---|
457 | for i,value in enumerate(data[0][3:]): |
---|
458 | bakVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,'%10.4f'%(value),style=wx.TE_PROCESS_ENTER) |
---|
459 | bakSizer.Add(bakVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
460 | ValObj[bakVal.GetId()] = [i+3] |
---|
461 | bakVal.Bind(wx.EVT_TEXT_ENTER,OnBakVal) |
---|
462 | bakVal.Bind(wx.EVT_KILL_FOCUS,OnBakVal) |
---|
463 | backSizer.Add(bakSizer) |
---|
464 | return backSizer |
---|
465 | |
---|
466 | def DebyeSizer(): |
---|
467 | |
---|
468 | def OnDebTerms(event): |
---|
469 | data[1]['nDebye'] = int(debTerms.GetValue()) |
---|
470 | M = len(data[1]['debyeTerms']) |
---|
471 | N = data[1]['nDebye'] |
---|
472 | if N > M: #add terms |
---|
473 | for i in range(M,N): |
---|
474 | data[1]['debyeTerms'].append([1.0,False,1.0,False,0.010,False]) |
---|
475 | elif N < M: #delete terms |
---|
476 | for i in range(N,M): |
---|
477 | del(data[1]['debyeTerms'][-1]) |
---|
478 | wx.CallAfter(UpdateBackground,G2frame,data) |
---|
479 | |
---|
480 | def KeyEditPeakGrid(event): |
---|
481 | colList = debyeGrid.GetSelectedCols() |
---|
482 | if event.GetKeyCode() == wx.WXK_RETURN: |
---|
483 | event.Skip(True) |
---|
484 | elif event.GetKeyCode() == wx.WXK_CONTROL: |
---|
485 | event.Skip(True) |
---|
486 | elif event.GetKeyCode() == wx.WXK_SHIFT: |
---|
487 | event.Skip(True) |
---|
488 | elif colList: |
---|
489 | debyeGrid.ClearSelection() |
---|
490 | key = event.GetKeyCode() |
---|
491 | for col in colList: |
---|
492 | if debyeTable.GetTypeName(0,col) == wg.GRID_VALUE_BOOL: |
---|
493 | if key == 89: #'Y' |
---|
494 | for row in range(debyeGrid.GetNumberRows()): data[1]['debyeTerms'][row][col]=True |
---|
495 | elif key == 78: #'N' |
---|
496 | for row in range(debyeGrid.GetNumberRows()): data[1]['debyeTerms'][row][col]=False |
---|
497 | |
---|
498 | |
---|
499 | debSizer = wx.BoxSizer(wx.VERTICAL) |
---|
500 | topSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
501 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Debye scattering: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
502 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' No. coeff.: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
503 | debTerms = wx.ComboBox(G2frame.dataDisplay,-1,value=str(data[1]['nDebye']),choices=[str(i) for i in range(12)], |
---|
504 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
505 | debTerms.Bind(wx.EVT_COMBOBOX,OnDebTerms) |
---|
506 | topSizer.Add(debTerms,0,wx.ALIGN_CENTER_VERTICAL) |
---|
507 | topSizer.Add((5,0),0) |
---|
508 | debSizer.Add(topSizer) |
---|
509 | if data[1]['nDebye']: |
---|
510 | debSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Debye diffuse terms:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
511 | rowLabels = [] |
---|
512 | for i in range(len(data[1]['debyeTerms'])): rowLabels.append(str(i)) |
---|
513 | colLabels = ['A','refine','R','refine','U','refine'] |
---|
514 | Types = [wg.GRID_VALUE_FLOAT+':10,2',wg.GRID_VALUE_BOOL, |
---|
515 | wg.GRID_VALUE_FLOAT+':10,3',wg.GRID_VALUE_BOOL, |
---|
516 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL] |
---|
517 | debyeTable = G2gd.Table(data[1]['debyeTerms'],rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
518 | debyeGrid = G2gd.GSGrid(parent=G2frame.dataDisplay) |
---|
519 | debyeGrid.SetTable(debyeTable, True) |
---|
520 | debyeGrid.Bind(wx.EVT_KEY_DOWN, KeyEditPeakGrid) |
---|
521 | debyeGrid.AutoSizeColumns(False) |
---|
522 | debSizer.Add(debyeGrid) |
---|
523 | return debSizer |
---|
524 | |
---|
525 | def PeaksSizer(): |
---|
526 | |
---|
527 | def OnPeaks(event): |
---|
528 | data[1]['nPeaks'] = int(peaks.GetValue()) |
---|
529 | M = len(data[1]['peaksList']) |
---|
530 | N = data[1]['nPeaks'] |
---|
531 | if N > M: #add terms |
---|
532 | for i in range(M,N): |
---|
533 | data[1]['peaksList'].append([1.0,False,1.0,False,0.10,False,0.10,False]) |
---|
534 | elif N < M: #delete terms |
---|
535 | for i in range(N,M): |
---|
536 | del(data[1]['peaksList'][-1]) |
---|
537 | wx.CallAfter(UpdateBackground,G2frame,data) |
---|
538 | |
---|
539 | def KeyEditPeakGrid(event): |
---|
540 | colList = peaksGrid.GetSelectedCols() |
---|
541 | if event.GetKeyCode() == wx.WXK_RETURN: |
---|
542 | event.Skip(True) |
---|
543 | elif event.GetKeyCode() == wx.WXK_CONTROL: |
---|
544 | event.Skip(True) |
---|
545 | elif event.GetKeyCode() == wx.WXK_SHIFT: |
---|
546 | event.Skip(True) |
---|
547 | elif colList: |
---|
548 | peaksGrid.ClearSelection() |
---|
549 | key = event.GetKeyCode() |
---|
550 | for col in colList: |
---|
551 | if peaksTable.GetTypeName(0,col) == wg.GRID_VALUE_BOOL: |
---|
552 | if key == 89: #'Y' |
---|
553 | for row in range(peaksGrid.GetNumberRows()): data[1]['peaksList'][row][col]=True |
---|
554 | elif key == 78: #'N' |
---|
555 | for row in range(peaksGrid.GetNumberRows()): data[1]['peaksList'][row][col]=False |
---|
556 | |
---|
557 | peaksSizer = wx.BoxSizer(wx.VERTICAL) |
---|
558 | topSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
559 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Peaks in background: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
560 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' No. peaks: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
561 | peaks = wx.ComboBox(G2frame.dataDisplay,-1,value=str(data[1]['nPeaks']),choices=[str(i) for i in range(12)], |
---|
562 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
563 | peaks.Bind(wx.EVT_COMBOBOX,OnPeaks) |
---|
564 | topSizer.Add(peaks,0,wx.ALIGN_CENTER_VERTICAL) |
---|
565 | topSizer.Add((5,0),0) |
---|
566 | peaksSizer.Add(topSizer) |
---|
567 | if data[1]['nPeaks']: |
---|
568 | peaksSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Peak list:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
569 | rowLabels = [] |
---|
570 | for i in range(len(data[1]['peaksList'])): rowLabels.append(str(i)) |
---|
571 | colLabels = ['pos','refine','int','refine','sig','refine','gam','refine'] |
---|
572 | Types = [wg.GRID_VALUE_FLOAT+':10,2',wg.GRID_VALUE_BOOL, |
---|
573 | wg.GRID_VALUE_FLOAT+':10,3',wg.GRID_VALUE_BOOL, |
---|
574 | wg.GRID_VALUE_FLOAT+':10,3',wg.GRID_VALUE_BOOL, |
---|
575 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_BOOL] |
---|
576 | peaksTable = G2gd.Table(data[1]['peaksList'],rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
577 | peaksGrid = G2gd.GSGrid(parent=G2frame.dataDisplay) |
---|
578 | peaksGrid.SetTable(peaksTable, True) |
---|
579 | peaksGrid.Bind(wx.EVT_KEY_DOWN, KeyEditPeakGrid) |
---|
580 | peaksGrid.AutoSizeColumns(False) |
---|
581 | peaksSizer.Add(peaksGrid) |
---|
582 | return peaksSizer |
---|
583 | |
---|
584 | if G2frame.dataDisplay: |
---|
585 | # G2frame.dataFrame.Clear() |
---|
586 | G2frame.dataFrame.DestroyChildren() |
---|
587 | G2frame.dataDisplay = wx.Panel(G2frame.dataFrame) |
---|
588 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.BackMenu) |
---|
589 | G2frame.dataFrame.SetLabel('Background') |
---|
590 | if not G2frame.dataFrame.GetStatusBar(): |
---|
591 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
592 | G2frame.Bind(wx.EVT_MENU,OnBackCopy,id=G2gd.wxID_BACKCOPY) |
---|
593 | G2frame.Bind(wx.EVT_MENU,OnBackFlagCopy,id=G2gd.wxID_BACKFLAGCOPY) |
---|
594 | BackId = G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Background') |
---|
595 | Choices = ['chebyschev','cosine','lin interpolate','inv interpolate','log interpolate'] |
---|
596 | mainSizer = wx.BoxSizer(wx.VERTICAL) |
---|
597 | mainSizer.Add(BackSizer()) |
---|
598 | mainSizer.Add((0,5),0) |
---|
599 | mainSizer.Add(DebyeSizer()) |
---|
600 | mainSizer.Add((0,5),0) |
---|
601 | mainSizer.Add(PeaksSizer()) |
---|
602 | mainSizer.Layout() |
---|
603 | G2frame.dataDisplay.SetSizer(mainSizer) |
---|
604 | G2frame.dataFrame.setSizePosLeft(mainSizer.Fit(G2frame.dataFrame)) |
---|
605 | |
---|
606 | ################################################################################ |
---|
607 | ##### Limits |
---|
608 | ################################################################################ |
---|
609 | |
---|
610 | def UpdateLimitsGrid(G2frame, data): |
---|
611 | '''respond to selection of PWDR Limits data tree item. |
---|
612 | ''' |
---|
613 | if G2frame.dataDisplay: |
---|
614 | G2frame.dataFrame.Clear() |
---|
615 | G2frame.ifGetExclude = False |
---|
616 | |
---|
617 | def KeyEditPeakGrid(event): |
---|
618 | if event.GetKeyCode() == wx.WXK_DELETE: |
---|
619 | row = G2frame.dataDisplay.GetSelectedRows()[0] |
---|
620 | if row > 1: #can't delete limits! |
---|
621 | del(data[row]) |
---|
622 | wx.CallAfter(UpdateLimitsGrid,G2frame,data) |
---|
623 | G2plt.PlotPatterns(G2frame) |
---|
624 | |
---|
625 | def RefreshLimitsGrid(event): |
---|
626 | event.StopPropagation() |
---|
627 | data = G2frame.LimitsTable.GetData() |
---|
628 | old = data[0] |
---|
629 | new = data[1] |
---|
630 | new[0] = max(old[0],new[0]) |
---|
631 | new[1] = max(new[0],min(old[1],new[1])) |
---|
632 | excl = [] |
---|
633 | if len(data) > 2: |
---|
634 | excl = data[2:] |
---|
635 | for item in excl: |
---|
636 | item[0] = max(old[0],item[0]) |
---|
637 | item[1] = max(item[0],min(old[1],item[1])) |
---|
638 | data = [old,new]+excl |
---|
639 | G2frame.LimitsTable.SetData(data) |
---|
640 | G2plt.PlotPatterns(G2frame) |
---|
641 | |
---|
642 | def OnLimitCopy(event): |
---|
643 | histList = ['All',]+G2gd.GetPatternTreeDataNames(G2frame,['PWDR',]) |
---|
644 | copyList = [] |
---|
645 | dlg = wx.MultiChoiceDialog(G2frame, |
---|
646 | 'Copy limits to which histograms?', 'Copy limits', |
---|
647 | histList, wx.CHOICEDLG_STYLE) |
---|
648 | try: |
---|
649 | if dlg.ShowModal() == wx.ID_OK: |
---|
650 | result = dlg.GetSelections() |
---|
651 | for i in result: |
---|
652 | copyList.append(histList[i]) |
---|
653 | if 'All' in copyList: |
---|
654 | copyList = histList[1:] |
---|
655 | for item in copyList: |
---|
656 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
657 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Limits'), |
---|
658 | copy.copy(data)) |
---|
659 | finally: |
---|
660 | dlg.Destroy() |
---|
661 | |
---|
662 | def OnAddExcl(event): |
---|
663 | G2frame.ifGetExclude = True |
---|
664 | print 'Add excluded region' |
---|
665 | |
---|
666 | G2frame.LimitsTable = [] |
---|
667 | colLabels = ['Tmin','Tmax'] |
---|
668 | rowLabels = ['original','changed'] |
---|
669 | for i in range(len(data)-2): |
---|
670 | rowLabels.append('exclude') |
---|
671 | Types = 2*[wg.GRID_VALUE_FLOAT+':10,3',] |
---|
672 | G2frame.LimitsTable = G2gd.Table(data,rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
673 | G2frame.dataFrame.SetLabel('Limits') |
---|
674 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.LimitMenu) |
---|
675 | if not G2frame.dataFrame.GetStatusBar(): |
---|
676 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
677 | G2frame.Bind(wx.EVT_MENU,OnLimitCopy,id=G2gd.wxID_LIMITCOPY) |
---|
678 | G2frame.Bind(wx.EVT_MENU,OnAddExcl,id=G2gd.wxID_ADDEXCLREGION) |
---|
679 | G2frame.dataDisplay = G2gd.GSGrid(parent=G2frame.dataFrame) |
---|
680 | G2frame.dataDisplay.SetTable(G2frame.LimitsTable, True) |
---|
681 | G2frame.dataDisplay.Bind(wg.EVT_GRID_CELL_CHANGE, RefreshLimitsGrid) |
---|
682 | G2frame.dataDisplay.Bind(wx.EVT_KEY_DOWN, KeyEditPeakGrid) |
---|
683 | G2frame.dataDisplay.SetMargins(0,0) |
---|
684 | G2frame.dataDisplay.AutoSizeColumns(False) |
---|
685 | G2frame.dataFrame.setSizePosLeft([230,260]) |
---|
686 | |
---|
687 | ################################################################################ |
---|
688 | ##### Instrument parameters |
---|
689 | ################################################################################ |
---|
690 | |
---|
691 | def UpdateInstrumentGrid(G2frame,data): |
---|
692 | '''respond to selection of PWDR Instrument Parameters |
---|
693 | data tree item. |
---|
694 | ''' |
---|
695 | def keycheck(keys): |
---|
696 | good = [] |
---|
697 | for key in keys: |
---|
698 | if key in ['Type','U','V','W','X','Y','SH/L','I(L2)/I(L1)','alpha', |
---|
699 | 'beta-0','beta-1','beta-q','sig-0','sig-1','sig-q','Polariz.', |
---|
700 | 'Lam','Azimuth','2-theta','difC','difA','Zero','Lam1','Lam2']: |
---|
701 | good.append(key) |
---|
702 | return good |
---|
703 | |
---|
704 | keys = keycheck(data.keys()) |
---|
705 | if 'P' in data['Type'][0]: #powder data |
---|
706 | insVal = dict(zip(keys,[data[key][1] for key in keys])) |
---|
707 | insDef = dict(zip(keys,[data[key][0] for key in keys])) |
---|
708 | insRef = dict(zip(keys,[data[key][2] for key in keys])) |
---|
709 | if 'NC' in data['Type'][0]: |
---|
710 | del(insDef['Polariz.']) |
---|
711 | del(insVal['Polariz.']) |
---|
712 | del(insRef['Polariz.']) |
---|
713 | else: #single crystal data |
---|
714 | insVal = dict(zip(keys,[data[key][1] for key in keys])) |
---|
715 | insDef = dict(zip(keys,[data[key][0] for key in keys])) |
---|
716 | insRef = {} |
---|
717 | ValObj = {} |
---|
718 | RefObj = {} |
---|
719 | waves = {'CuKa':[1.54051,1.54433],'TiKa':[2.74841,2.75207],'CrKa':[2.28962,2.29351], |
---|
720 | 'FeKa':[1.93597,1.93991],'CoKa':[1.78892,1.79278],'MoKa':[0.70926,0.713543], |
---|
721 | 'AgKa':[0.559363,0.563775]} |
---|
722 | Inst2 = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame, |
---|
723 | G2frame.PatternId,'Instrument Parameters'))[1] |
---|
724 | |
---|
725 | def inst2data(inst,ref,data): |
---|
726 | for item in data: |
---|
727 | try: |
---|
728 | data[item] = [data[item][0],inst[item],ref[item]] |
---|
729 | except KeyError: |
---|
730 | pass #skip 'Polariz.' for N-data |
---|
731 | return data |
---|
732 | |
---|
733 | def updateData(inst,ref): |
---|
734 | return inst2data(inst,ref,G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame, |
---|
735 | G2frame.PatternId,'Instrument Parameters'))[0]) |
---|
736 | |
---|
737 | def RefreshInstrumentGrid(event,doAnyway=False): |
---|
738 | if doAnyway or event.GetRow() == 1: |
---|
739 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Peak List')) |
---|
740 | newpeaks = [] |
---|
741 | for peak in peaks: |
---|
742 | newpeaks.append(G2mth.setPeakparms(data,Inst2,peak[0],peak[2])) |
---|
743 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Peak List'),newpeaks) |
---|
744 | |
---|
745 | def OnLoad(event): |
---|
746 | '''Loads instrument parameters from a G2 .instprm file |
---|
747 | in response to the Instrument Parameters-Operations/Load Profile menu |
---|
748 | |
---|
749 | Note that similar code is found in ReadPowderInstprm (GSASII.py) |
---|
750 | ''' |
---|
751 | dlg = wx.FileDialog(G2frame, 'Choose GSAS-II instrument parameters file', '.', '', |
---|
752 | 'instrument parameter files (*.instprm)|*.instprm',wx.OPEN|wx.CHANGE_DIR) |
---|
753 | try: |
---|
754 | if dlg.ShowModal() == wx.ID_OK: |
---|
755 | filename = dlg.GetPath() |
---|
756 | File = open(filename,'r') |
---|
757 | S = File.readline() |
---|
758 | newItems = [] |
---|
759 | newVals = [] |
---|
760 | while S: |
---|
761 | if S[0] == '#': |
---|
762 | S = File.readline() |
---|
763 | continue |
---|
764 | [item,val] = S[:-1].split(':') |
---|
765 | newItems.append(item) |
---|
766 | try: |
---|
767 | newVals.append(float(val)) |
---|
768 | except ValueError: |
---|
769 | newVals.append(val) |
---|
770 | S = File.readline() |
---|
771 | File.close() |
---|
772 | Inst,Inst2 = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId,'Instrument Parameters')) |
---|
773 | inst = G2IO.makeInstDict(newItems,newVals,len(newVals)*[False,]) |
---|
774 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId,'Instrument Parameters'),[inst,Inst2]) |
---|
775 | RefreshInstrumentGrid(event,doAnyway=True) #to get peaks updated |
---|
776 | UpdateInstrumentGrid(G2frame,data) |
---|
777 | G2plt.PlotPeakWidths(G2frame) |
---|
778 | finally: |
---|
779 | dlg.Destroy() |
---|
780 | |
---|
781 | def OnSave(event): |
---|
782 | '''Respond to the Instrument Parameters Operations/Save Profile menu |
---|
783 | item: writes current parameters to a .instprm file |
---|
784 | ''' |
---|
785 | dlg = wx.FileDialog(G2frame, 'Choose GSAS-II instrument parameters file', '.', '', |
---|
786 | 'instrument parameter files (*.instprm)|*.instprm',wx.FD_SAVE|wx.FD_OVERWRITE_PROMPT|wx.CHANGE_DIR) |
---|
787 | try: |
---|
788 | if dlg.ShowModal() == wx.ID_OK: |
---|
789 | filename = dlg.GetPath() |
---|
790 | # make sure extension is .instprm |
---|
791 | filename = os.path.splitext(filename)[0]+'.instprm' |
---|
792 | File = open(filename,'w') |
---|
793 | File.write("#GSAS-II instrument parameter file; do not add/delete or change order of items!\n") |
---|
794 | for item in data: |
---|
795 | File.write(item+':'+str(data[item][1])+'\n') |
---|
796 | File.close() |
---|
797 | finally: |
---|
798 | dlg.Destroy() |
---|
799 | |
---|
800 | def OnReset(event): |
---|
801 | insVal.update(insDef) |
---|
802 | data = updateData(insVal,insRef) |
---|
803 | RefreshInstrumentGrid(event,doAnyway=True) #to get peaks updated |
---|
804 | UpdateInstrumentGrid(G2frame,data) |
---|
805 | G2plt.PlotPeakWidths(G2frame) |
---|
806 | |
---|
807 | def OnInstFlagCopy(event): |
---|
808 | histName = G2frame.PatternTree.GetItemText(G2frame.PatternId) |
---|
809 | keys = data.keys() |
---|
810 | flags = dict(zip(keys,[data[key][2] for key in keys])) |
---|
811 | instType = data['Type'][0] |
---|
812 | histList = ['All',]+G2gd.GetPatternTreeDataNames(G2frame,['PWDR',]) |
---|
813 | copyList = [] |
---|
814 | dlg = wx.MultiChoiceDialog(G2frame, |
---|
815 | 'Copy refinement flags from\n'+histName, 'Copy refinement flags', |
---|
816 | histList, wx.CHOICEDLG_STYLE) |
---|
817 | try: |
---|
818 | if dlg.ShowModal() == wx.ID_OK: |
---|
819 | result = dlg.GetSelections() |
---|
820 | for i in result: |
---|
821 | copyList.append(histList[i]) |
---|
822 | if 'All' in copyList: |
---|
823 | copyList = histList[1:] |
---|
824 | for item in copyList: |
---|
825 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
826 | instData = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Instrument Parameters'))[0] |
---|
827 | if len(data) == len(instData) and instType == instData['Type'][0]: #don't mix data types or lam & lam1/lam2 parms! |
---|
828 | for item in instData: |
---|
829 | instData[item][2] = copy.copy(flags[item]) |
---|
830 | else: |
---|
831 | print item+' not copied - instrument parameters not commensurate' |
---|
832 | finally: |
---|
833 | dlg.Destroy() |
---|
834 | |
---|
835 | def OnInstCopy(event): |
---|
836 | #need fix for dictionary |
---|
837 | histName = G2frame.PatternTree.GetItemText(G2frame.PatternId) |
---|
838 | histList = ['All',]+G2gd.GetPatternTreeDataNames(G2frame,['PWDR',]) |
---|
839 | copyList = [] |
---|
840 | instType = data['Type'][0] |
---|
841 | dlg = wx.MultiChoiceDialog(G2frame, |
---|
842 | 'Copy parameters from\n'+histName, 'Copy parameters', |
---|
843 | histList, wx.CHOICEDLG_STYLE) |
---|
844 | try: |
---|
845 | if dlg.ShowModal() == wx.ID_OK: |
---|
846 | result = dlg.GetSelections() |
---|
847 | for i in result: |
---|
848 | copyList.append(histList[i]) |
---|
849 | if 'All' in copyList: |
---|
850 | copyList = histList[1:] |
---|
851 | for item in copyList: |
---|
852 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
853 | instData = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Instrument Parameters'))[0] |
---|
854 | if len(data) == len(instData) and instType == instData['Type'][0]: #don't mix data types or lam & lam1/lam2 parms! |
---|
855 | instData.update(data) |
---|
856 | else: |
---|
857 | print item+' not copied - instrument parameters not commensurate' |
---|
858 | finally: |
---|
859 | dlg.Destroy() |
---|
860 | |
---|
861 | def OnWaveChange(event): |
---|
862 | if 'Lam' in insVal: |
---|
863 | data['Lam1'] = [waves['CuKa'][0],waves['CuKa'][0],0] |
---|
864 | data['Lam2'] = [waves['CuKa'][1],waves['CuKa'][1],0] |
---|
865 | data['I(L2)/I(L1)'] = [0.5,0.5,0] |
---|
866 | del(data['Lam']) |
---|
867 | else: |
---|
868 | data['Lam'] = [data['Lam1'][0],data['Lam1'][0],0] |
---|
869 | del(data['Lam1']) |
---|
870 | wx.CallAfter(UpdateInstrumentGrid,data) |
---|
871 | |
---|
872 | def OnLamPick(event): |
---|
873 | lamType = lamPick.GetValue() |
---|
874 | insVal['Lam1'] = waves[lamType][0] |
---|
875 | insVal['Lam2'] = waves[lamType][1] |
---|
876 | data = updateData(insVal,insRef) |
---|
877 | UpdateInstrumentGrid(G2frame,data) |
---|
878 | |
---|
879 | def OnRatValue(event): |
---|
880 | try: |
---|
881 | value = float(ratVal.GetValue()) |
---|
882 | if value < 0: |
---|
883 | raise ValueError |
---|
884 | except ValueError: |
---|
885 | value = insVal['I(L2)/I(L1)'] |
---|
886 | insVal['I(L2)/I(L1)'] = value |
---|
887 | ratVal.SetValue('%10.4f'%(value)) |
---|
888 | data = updateData(insVal,insRef) |
---|
889 | |
---|
890 | def OnRatRef(event): |
---|
891 | insRef['I(L2)/I(L1)'] = ratRef.GetValue() |
---|
892 | data = updateData(insVal,insRef) |
---|
893 | |
---|
894 | def OnWaveValue(event): |
---|
895 | try: |
---|
896 | value = float(waveVal.GetValue()) |
---|
897 | if value < 0: |
---|
898 | raise ValueError |
---|
899 | except ValueError: |
---|
900 | value = insVal['Lam'] |
---|
901 | insVal['Lam'] = value |
---|
902 | waveVal.SetValue('%10.6f'%(value)) |
---|
903 | data = updateData(insVal,insRef) |
---|
904 | |
---|
905 | def OnWaveRef(event): |
---|
906 | insRef['Lam'] = waveRef.GetValue() |
---|
907 | data = updateData(insVal,insRef) |
---|
908 | |
---|
909 | def OnItemValue(event): |
---|
910 | Obj = event.GetEventObject() |
---|
911 | item,fmt = ValObj[Obj.GetId()] |
---|
912 | try: |
---|
913 | value = float(Obj.GetValue()) |
---|
914 | except ValueError: |
---|
915 | value = insVal[item] |
---|
916 | insVal[item] = value |
---|
917 | Obj.SetValue(fmt%(value)) |
---|
918 | data = updateData(insVal,insRef) |
---|
919 | G2plt.PlotPeakWidths(G2frame) |
---|
920 | |
---|
921 | def OnItemRef(event): |
---|
922 | Obj = event.GetEventObject() |
---|
923 | item = RefObj[Obj.GetId()] |
---|
924 | insRef[item] = Obj.GetValue() |
---|
925 | data = updateData(insVal,insRef) |
---|
926 | |
---|
927 | if G2frame.dataDisplay: |
---|
928 | G2frame.dataFrame.Clear() |
---|
929 | try: |
---|
930 | histoName = G2frame.PatternTree.GetItemPyData(G2frame.PatternId)[-1] |
---|
931 | ifHisto = IsHistogramInAnyPhase(G2frame,histoName) |
---|
932 | except TypeError: #PKS data never used in a phase as data |
---|
933 | ifhisto = False |
---|
934 | G2gd.SetDataMenuBar(G2frame) |
---|
935 | G2frame.dataFrame.SetLabel('Instrument Parameters') |
---|
936 | G2frame.dataDisplay = wx.Panel(G2frame.dataFrame) |
---|
937 | topSizer = wx.FlexGridSizer(1,6,5,5) |
---|
938 | instSizer = wx.FlexGridSizer(2,6,5,5) |
---|
939 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Histogram Type: '+insVal['Type']),0,wx.ALIGN_CENTER_VERTICAL) |
---|
940 | # topSizer.Add((5,5),0) |
---|
941 | if 'P' in insVal['Type']: #powder data |
---|
942 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.InstMenu) |
---|
943 | if not G2frame.dataFrame.GetStatusBar(): |
---|
944 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
945 | G2frame.Bind(wx.EVT_MENU,OnLoad,id=G2gd.wxID_INSTLOAD) |
---|
946 | G2frame.Bind(wx.EVT_MENU,OnSave,id=G2gd.wxID_INSTSAVE) |
---|
947 | G2frame.Bind(wx.EVT_MENU,OnReset,id=G2gd.wxID_INSTPRMRESET) |
---|
948 | G2frame.Bind(wx.EVT_MENU,OnInstCopy,id=G2gd.wxID_INSTCOPY) |
---|
949 | G2frame.Bind(wx.EVT_MENU,OnInstFlagCopy,id=G2gd.wxID_INSTFLAGCOPY) |
---|
950 | G2frame.Bind(wx.EVT_MENU,OnWaveChange,id=G2gd.wxID_CHANGEWAVETYPE) |
---|
951 | if 'C' in insVal['Type']: #constant wavelength |
---|
952 | #patch |
---|
953 | if 'Azimuth' not in insVal: |
---|
954 | insVal['Azimuth'] = 0.0 |
---|
955 | insDef['Azimuth'] = 0.0 |
---|
956 | insRef['Azimuth'] = False |
---|
957 | #end of patch |
---|
958 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Azimuth: %7.2f'%(insVal['Azimuth'])),0,wx.ALIGN_CENTER_VERTICAL) |
---|
959 | if 'Lam1' in insVal: |
---|
960 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Ka1/Ka2:'), |
---|
961 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
962 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,u' %8.6f/%8.6f\xc5'%(insVal['Lam1'],insVal['Lam2'])), |
---|
963 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
964 | waveSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
965 | waveSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Select: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
966 | choice = ['TiKa','CrKa','FeKa','CoKa','CuKa','MoKa','AgKa'] |
---|
967 | lamPick = wx.ComboBox(G2frame.dataDisplay,value=' ',choices=choice,style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
968 | lamPick.Bind(wx.EVT_COMBOBOX, OnLamPick) |
---|
969 | waveSizer.Add(lamPick,0) |
---|
970 | topSizer.Add(waveSizer,0) |
---|
971 | instSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' I(L2)/I(L1): (%10.4f)'%(insDef['I(L2)/I(L1)'])), |
---|
972 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
973 | ratVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,'%10.4f'%(insVal['I(L2)/I(L1)']),style=wx.TE_PROCESS_ENTER) |
---|
974 | ratVal.Bind(wx.EVT_TEXT_ENTER,OnRatValue) |
---|
975 | ratVal.Bind(wx.EVT_KILL_FOCUS,OnRatValue) |
---|
976 | instSizer.Add(ratVal,0) |
---|
977 | ratRef = wx.CheckBox(G2frame.dataDisplay,label=' Refine?') |
---|
978 | ratRef.SetValue(bool(insRef['I(L2)/I(L1)'])) |
---|
979 | ratRef.Bind(wx.EVT_CHECKBOX, OnRatRef) |
---|
980 | instSizer.Add(ratRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
981 | |
---|
982 | else: |
---|
983 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,u' Lam (\xc5): (%10.6f)'%(insDef['Lam'])), |
---|
984 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
985 | waveVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,'%10.6f'%(insVal['Lam']),style=wx.TE_PROCESS_ENTER) |
---|
986 | waveVal.Bind(wx.EVT_TEXT_ENTER,OnWaveValue) |
---|
987 | waveVal.Bind(wx.EVT_KILL_FOCUS,OnWaveValue) |
---|
988 | topSizer.Add(waveVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
989 | if ifHisto: |
---|
990 | waveRef = wx.CheckBox(G2frame.dataDisplay,label=' Refine?') |
---|
991 | waveRef.SetValue(bool(insRef['Lam'])) |
---|
992 | waveRef.Bind(wx.EVT_CHECKBOX, OnWaveRef) |
---|
993 | topSizer.Add(waveRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
994 | for item in ['Zero','Polariz.']: |
---|
995 | fmt = '%10.4f' |
---|
996 | Fmt = ' %s: ('+fmt+')' |
---|
997 | if item in insDef: |
---|
998 | instSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,Fmt%(item,insDef[item])), |
---|
999 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1000 | itemVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,fmt%(insVal[item]),style=wx.TE_PROCESS_ENTER) |
---|
1001 | ValObj[itemVal.GetId()] = [item,fmt] |
---|
1002 | itemVal.Bind(wx.EVT_TEXT_ENTER,OnItemValue) |
---|
1003 | itemVal.Bind(wx.EVT_KILL_FOCUS,OnItemValue) |
---|
1004 | instSizer.Add(itemVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1005 | if ifHisto: |
---|
1006 | itemRef = wx.CheckBox(G2frame.dataDisplay,wx.ID_ANY,label=' Refine?') |
---|
1007 | itemRef.SetValue(bool(insRef[item])) |
---|
1008 | RefObj[itemRef.GetId()] = item |
---|
1009 | itemRef.Bind(wx.EVT_CHECKBOX, OnItemRef) |
---|
1010 | instSizer.Add(itemRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1011 | else: |
---|
1012 | instSizer.Add((5,5),0) |
---|
1013 | else: #skip Polariz. for neutrons |
---|
1014 | instSizer.Add((5,5),0) |
---|
1015 | instSizer.Add((5,5),0) |
---|
1016 | instSizer.Add((5,5),0) |
---|
1017 | for item in ['U','V','W','X','Y','SH/L']: |
---|
1018 | fmt = '%10.3f' |
---|
1019 | if item == 'SH/L': |
---|
1020 | fmt = '%10.5f' |
---|
1021 | Fmt = ' %s: ('+fmt+')' |
---|
1022 | instSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,Fmt%(item,insDef[item])), |
---|
1023 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1024 | itemVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,fmt%(insVal[item]),style=wx.TE_PROCESS_ENTER) |
---|
1025 | ValObj[itemVal.GetId()] = [item,fmt] |
---|
1026 | itemVal.Bind(wx.EVT_TEXT_ENTER,OnItemValue) |
---|
1027 | itemVal.Bind(wx.EVT_KILL_FOCUS,OnItemValue) |
---|
1028 | instSizer.Add(itemVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1029 | itemRef = wx.CheckBox(G2frame.dataDisplay,wx.ID_ANY,label=' Refine?') |
---|
1030 | itemRef.SetValue(bool(insRef[item])) |
---|
1031 | RefObj[itemRef.GetId()] = item |
---|
1032 | itemRef.Bind(wx.EVT_CHECKBOX, OnItemRef) |
---|
1033 | instSizer.Add(itemRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1034 | else: #time of flight (neutrons) |
---|
1035 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' Azimuth: %7.2f'%(insVal['Azimuth'])),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1036 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' 2-theta: %7.2f'%(insVal['2-theta'])),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1037 | if 'Pdabc' in Inst2: |
---|
1038 | Items = ['sig-0','sig-1','X','Y'] |
---|
1039 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' difC: %8.2f'%(insVal['difC'])),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1040 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,' alpha, beta: fixed by table'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1041 | else: |
---|
1042 | Items = ['difC','difA','Zero','alpha','beta-0','beta-1','beta-q','sig-0','sig-1','sig-q','X','Y'] |
---|
1043 | for item in Items: |
---|
1044 | fmt = '%10.3f' |
---|
1045 | if 'beta' in item: |
---|
1046 | fmt = '%12.4g' |
---|
1047 | Fmt = ' %s: ('+fmt+')' |
---|
1048 | instSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,Fmt%(item,insDef[item])), |
---|
1049 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1050 | itemVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,fmt%(insVal[item]),style=wx.TE_PROCESS_ENTER) |
---|
1051 | ValObj[itemVal.GetId()] = [item,fmt] |
---|
1052 | itemVal.Bind(wx.EVT_TEXT_ENTER,OnItemValue) |
---|
1053 | itemVal.Bind(wx.EVT_KILL_FOCUS,OnItemValue) |
---|
1054 | instSizer.Add(itemVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1055 | if not ifHisto and item in ['difC','difA','Zero',]: |
---|
1056 | instSizer.Add((5,5),0) |
---|
1057 | else: |
---|
1058 | itemRef = wx.CheckBox(G2frame.dataDisplay,wx.ID_ANY,label=' Refine?') |
---|
1059 | itemRef.SetValue(bool(insRef[item])) |
---|
1060 | RefObj[itemRef.GetId()] = item |
---|
1061 | itemRef.Bind(wx.EVT_CHECKBOX, OnItemRef) |
---|
1062 | instSizer.Add(itemRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1063 | |
---|
1064 | else: #single crystal data |
---|
1065 | if 'C' in insVal['Type']: #constant wavelength |
---|
1066 | instSizer.Add(wx.StaticText(G2frame.dataDisplay,-1,u' Lam (\xc5): (%10.6f)'%(insDef['Lam'])), |
---|
1067 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1068 | waveVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,'%10.6f'%(insVal['Lam']),style=wx.TE_PROCESS_ENTER) |
---|
1069 | waveVal.Bind(wx.EVT_TEXT_ENTER,OnWaveValue) |
---|
1070 | waveVal.Bind(wx.EVT_KILL_FOCUS,OnWaveValue) |
---|
1071 | instSizer.Add(waveVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1072 | else: #time of flight (neutrons) |
---|
1073 | pass #for now |
---|
1074 | |
---|
1075 | mainSizer = wx.BoxSizer(wx.VERTICAL) |
---|
1076 | mainSizer.Add(topSizer,0) |
---|
1077 | mainSizer.Add(instSizer,0) |
---|
1078 | mainSizer.Layout() |
---|
1079 | G2frame.dataDisplay.SetSizer(mainSizer) |
---|
1080 | G2frame.dataFrame.setSizePosLeft(mainSizer.Fit(G2frame.dataFrame)) |
---|
1081 | |
---|
1082 | ################################################################################ |
---|
1083 | ##### Sample parameters |
---|
1084 | ################################################################################ |
---|
1085 | |
---|
1086 | def UpdateSampleGrid(G2frame,data): |
---|
1087 | '''respond to selection of PWDR Sample Parameters |
---|
1088 | data tree item. |
---|
1089 | ''' |
---|
1090 | def SetCopyNames(histName,addNames=[]): |
---|
1091 | copyNames = ['Scale',] |
---|
1092 | dataType = data['Type'] |
---|
1093 | histType = 'HKLF' |
---|
1094 | if 'PWDR' in histName: #else HKLF - only Scale |
---|
1095 | histType = 'PWDR' |
---|
1096 | if 'Debye' in dataType: |
---|
1097 | copyNames += ['DisplaceX','DisplaceY','Absorption'] |
---|
1098 | else: #Bragg-Brentano |
---|
1099 | copyNames += ['Shift','Transparency'] |
---|
1100 | if len(addNames): |
---|
1101 | copyNames += addNames |
---|
1102 | return histType,copyNames |
---|
1103 | |
---|
1104 | def OnSampleSave(event): |
---|
1105 | '''Respond to the Sample Parameters Operations/Save menu |
---|
1106 | item: writes current parameters to a .samprm file |
---|
1107 | ''' |
---|
1108 | dlg = wx.FileDialog(G2frame, 'Choose GSAS-II sample parameters file', '.', '', |
---|
1109 | 'sample parameter files (*.samprm)|*.samprm',wx.FD_SAVE|wx.FD_OVERWRITE_PROMPT|wx.CHANGE_DIR) |
---|
1110 | try: |
---|
1111 | if dlg.ShowModal() == wx.ID_OK: |
---|
1112 | filename = dlg.GetPath() |
---|
1113 | # make sure extension is .samprm |
---|
1114 | filename = os.path.splitext(filename)[0]+'.samprm' |
---|
1115 | File = open(filename,'w') |
---|
1116 | File.write("#GSAS-II sample parameter file\n") |
---|
1117 | File.write("'Type':'"+str(data['Type'])+"'\n") |
---|
1118 | File.write("'Gonio. radius':"+str(data['Gonio. radius'])+"\n") |
---|
1119 | if data.get('InstrName'): |
---|
1120 | File.write("'InstrName':'"+str(data['InstrName'])+"'\n") |
---|
1121 | File.close() |
---|
1122 | finally: |
---|
1123 | dlg.Destroy() |
---|
1124 | |
---|
1125 | |
---|
1126 | def OnSampleLoad(event): |
---|
1127 | '''Loads sample parameters from a G2 .samprm file |
---|
1128 | in response to the Sample Parameters-Operations/Load menu |
---|
1129 | |
---|
1130 | Note that similar code is found in ReadPowderInstprm (GSASII.py) |
---|
1131 | ''' |
---|
1132 | dlg = wx.FileDialog(G2frame, 'Choose GSAS-II sample parameters file', '.', '', |
---|
1133 | 'sample parameter files (*.samprm)|*.samprm',wx.OPEN|wx.CHANGE_DIR) |
---|
1134 | try: |
---|
1135 | if dlg.ShowModal() == wx.ID_OK: |
---|
1136 | filename = dlg.GetPath() |
---|
1137 | File = open(filename,'r') |
---|
1138 | S = File.readline() |
---|
1139 | newItems = {} |
---|
1140 | while S: |
---|
1141 | if S[0] == '#': |
---|
1142 | S = File.readline() |
---|
1143 | continue |
---|
1144 | [item,val] = S[:-1].split(':') |
---|
1145 | newItems[item.strip("'")] = eval(val) |
---|
1146 | S = File.readline() |
---|
1147 | File.close() |
---|
1148 | data.update(newItems) |
---|
1149 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId,'Sample Parameters'),data) |
---|
1150 | UpdateSampleGrid(G2frame,data) |
---|
1151 | finally: |
---|
1152 | dlg.Destroy() |
---|
1153 | |
---|
1154 | def OnSampleCopy(event): |
---|
1155 | histName = G2frame.PatternTree.GetItemText(G2frame.PatternId) |
---|
1156 | histType,copyNames = SetCopyNames( |
---|
1157 | histName, |
---|
1158 | addNames=['Omega','Chi','Phi','Gonio. radius','InstrName']) |
---|
1159 | copyDict = {} |
---|
1160 | for parm in copyNames: |
---|
1161 | copyDict[parm] = data[parm] |
---|
1162 | histList = ['All '+histType,] |
---|
1163 | AllList = {} |
---|
1164 | item, cookie = G2frame.PatternTree.GetFirstChild(G2frame.root) |
---|
1165 | while item: |
---|
1166 | name = G2frame.PatternTree.GetItemText(item) |
---|
1167 | if histType in name and name != histName: |
---|
1168 | allname = name.split(' Azm=')[0] |
---|
1169 | if allname in AllList: |
---|
1170 | AllList[allname] += 1 |
---|
1171 | else: |
---|
1172 | AllList[allname] = 1 |
---|
1173 | histList.append(name) |
---|
1174 | item, cookie = G2frame.PatternTree.GetNextChild(G2frame.root, cookie) |
---|
1175 | if len(histList) == 1: #nothing to copy to! |
---|
1176 | return |
---|
1177 | nAll = 0 |
---|
1178 | AllNames = AllList.keys() |
---|
1179 | AllNames.sort() |
---|
1180 | for allname in AllNames: |
---|
1181 | if AllList[allname] > 1: |
---|
1182 | histList.insert(1+nAll,'All '+allname) |
---|
1183 | nAll += 1 |
---|
1184 | copyList = [] |
---|
1185 | dlg = wx.MultiChoiceDialog(G2frame,'Copy parameters from\n'+histName, |
---|
1186 | 'Copy parameters',histList,wx.CHOICEDLG_STYLE) |
---|
1187 | try: |
---|
1188 | if dlg.ShowModal() == wx.ID_OK: |
---|
1189 | result = dlg.GetSelections() |
---|
1190 | for i in result: |
---|
1191 | copyList.append(histList[i]) |
---|
1192 | for allname in AllList: |
---|
1193 | if 'All '+allname in copyList: |
---|
1194 | copyList = [] |
---|
1195 | for name in histList: |
---|
1196 | if name.split(' Azm=')[0] == allname: |
---|
1197 | copyList.append(name) |
---|
1198 | break #only one All allowed |
---|
1199 | if 'All '+histType in copyList: |
---|
1200 | copyList = histList[1+nAll:] |
---|
1201 | for item in copyList: |
---|
1202 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
1203 | sampleData = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Sample Parameters')) |
---|
1204 | sampleData.update(copy.deepcopy(copyDict)) |
---|
1205 | finally: |
---|
1206 | dlg.Destroy() |
---|
1207 | |
---|
1208 | def OnSampleFlagCopy(event): |
---|
1209 | histName = G2frame.PatternTree.GetItemText(G2frame.PatternId) |
---|
1210 | histType,copyNames = SetCopyNames(histName) |
---|
1211 | flagDict = {} |
---|
1212 | for parm in copyNames: |
---|
1213 | flagDict[parm] = data[parm][1] |
---|
1214 | histList = ['All '+histType,] |
---|
1215 | item, cookie = G2frame.PatternTree.GetFirstChild(G2frame.root) |
---|
1216 | while item: |
---|
1217 | name = G2frame.PatternTree.GetItemText(item) |
---|
1218 | if histType in name and name != histName: |
---|
1219 | histList.append(name) |
---|
1220 | item, cookie = G2frame.PatternTree.GetNextChild(G2frame.root, cookie) |
---|
1221 | if len(histList) == 1: #nothing to copy to! |
---|
1222 | return |
---|
1223 | copyList = [] |
---|
1224 | dlg = wx.MultiChoiceDialog(G2frame,'Copy parameters from\n'+histName, |
---|
1225 | 'Copy refinement flags',histList,wx.CHOICEDLG_STYLE) |
---|
1226 | try: |
---|
1227 | if dlg.ShowModal() == wx.ID_OK: |
---|
1228 | result = dlg.GetSelections() |
---|
1229 | for i in result: |
---|
1230 | copyList.append(histList[i]) |
---|
1231 | if 'All '+histType in copyList: |
---|
1232 | copyList = histList[1:] |
---|
1233 | for item in copyList: |
---|
1234 | Id = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,item) |
---|
1235 | sampleData = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,Id,'Sample Parameters')) |
---|
1236 | for name in copyNames: |
---|
1237 | sampleData[name][1] = copy.copy(flagDict[name]) |
---|
1238 | finally: |
---|
1239 | dlg.Destroy() |
---|
1240 | |
---|
1241 | if G2frame.dataDisplay: |
---|
1242 | G2frame.dataFrame.Clear() |
---|
1243 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.SampleMenu) |
---|
1244 | G2frame.dataFrame.SetLabel('Sample Parameters') |
---|
1245 | G2frame.Bind(wx.EVT_MENU, OnSampleCopy, id=G2gd.wxID_SAMPLECOPY) |
---|
1246 | G2frame.Bind(wx.EVT_MENU, OnSampleFlagCopy, id=G2gd.wxID_SAMPLEFLAGCOPY) |
---|
1247 | G2frame.Bind(wx.EVT_MENU, OnSampleSave, id=G2gd.wxID_SAMPLESAVE) |
---|
1248 | G2frame.Bind(wx.EVT_MENU, OnSampleLoad, id=G2gd.wxID_SAMPLELOAD) |
---|
1249 | if not G2frame.dataFrame.GetStatusBar(): |
---|
1250 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
1251 | G2frame.dataDisplay = wx.Panel(G2frame.dataFrame) |
---|
1252 | |
---|
1253 | #patch |
---|
1254 | if 'ranId' not in data: |
---|
1255 | data['ranId'] = ran.randint(0,sys.maxint) |
---|
1256 | if not 'Gonio. radius' in data: |
---|
1257 | data['Gonio. radius'] = 200.0 |
---|
1258 | if not 'Omega' in data: |
---|
1259 | data.update({'Omega':0.0,'Chi':0.0,'Phi':0.0}) |
---|
1260 | #patch end |
---|
1261 | |
---|
1262 | parms = [['Gonio. radius',' Goniometer radius(mm): ','%.2f',]] |
---|
1263 | if data['Type'] == 'Debye-Scherrer': |
---|
1264 | parms += [['DisplaceX',u' Sample X displ. perp. to beam (\xb5m): ','%.2f',], |
---|
1265 | ['DisplaceY',u' Sample Y displ. || to beam (\xb5m): ','%.2f',], |
---|
1266 | ['Absorption',u' Sample absorption(\xb5r): ','%.4f',],] |
---|
1267 | elif data['Type'] == 'Bragg-Brentano': |
---|
1268 | parms += [['Shift',u' Sample displacement(\xb5m): ','%.2f',], |
---|
1269 | ['Transparency',u' Sample transparency(1/\xb5eff,cm): ','%.4f'],] |
---|
1270 | parms.append(['Omega','Goniometer omega:','%.2f']) |
---|
1271 | parms.append(['Chi','Goniometer chi:','%.2f']) |
---|
1272 | parms.append(['Phi','Goniometer phi:','%.2f']) |
---|
1273 | parms.append(['Temperature',' Sample temperature(K): ','%.2f']) |
---|
1274 | parms.append(['Pressure',' Sample pressure(MPa): ','%.3f']) |
---|
1275 | parms.append(['Humidity',' Sample humidity(%): ','%.1f']) |
---|
1276 | parms.append(['Voltage',' Sample voltage(V): ','%.3f']) |
---|
1277 | parms.append(['Force',' Applied load(MN): ','%.3f']) |
---|
1278 | objList = {} |
---|
1279 | |
---|
1280 | def OnScaleRef(event): |
---|
1281 | Obj = event.GetEventObject() |
---|
1282 | data['Scale'][1] = Obj.GetValue() |
---|
1283 | |
---|
1284 | def OnScaleVal(event): |
---|
1285 | Obj = event.GetEventObject() |
---|
1286 | try: |
---|
1287 | scale = float(Obj.GetValue()) |
---|
1288 | if scale > 0: |
---|
1289 | data['Scale'][0] = scale |
---|
1290 | except ValueError: |
---|
1291 | pass |
---|
1292 | Obj.SetValue("%.4f"%(data['Scale'][0])) #reset in case of error |
---|
1293 | |
---|
1294 | def OnHistoType(event): |
---|
1295 | Obj = event.GetEventObject() |
---|
1296 | data['Type'] = Obj.GetValue() |
---|
1297 | if data['Type'] == 'Bragg-Brentano' and 'Shift' not in data: #set up defaults for new type(s) |
---|
1298 | data['Shift'] = [0.0,False] |
---|
1299 | data['Transparency'] = [0.0,False] |
---|
1300 | wx.CallAfter(UpdateSampleGrid,G2frame,data) |
---|
1301 | |
---|
1302 | def OnParmRef(event): |
---|
1303 | Obj = event.GetEventObject() |
---|
1304 | parm = objList[Obj.GetId()] |
---|
1305 | data[parm][1] = Obj.GetValue() |
---|
1306 | |
---|
1307 | def OnParmVal(event): |
---|
1308 | Obj = event.GetEventObject() |
---|
1309 | parm = objList[Obj.GetId()] |
---|
1310 | try: |
---|
1311 | if 'list' in str(type(data[parm[0]])): |
---|
1312 | data[parm[0]][0] = float(Obj.GetValue()) |
---|
1313 | else: |
---|
1314 | data[parm[0]] = float(Obj.GetValue()) |
---|
1315 | except ValueError: |
---|
1316 | pass |
---|
1317 | if 'list' in str(type(data[parm[0]])): |
---|
1318 | Obj.SetValue(parm[2]%(data[parm[0]][0])) #reset in case of error |
---|
1319 | else: |
---|
1320 | Obj.SetValue(parm[2]%(data[parm[0]])) #reset in case of error |
---|
1321 | |
---|
1322 | def SetNameVal(): |
---|
1323 | inst = instNameVal.GetValue() |
---|
1324 | data['InstrName'] = inst.strip() |
---|
1325 | |
---|
1326 | def OnNameVal(event): |
---|
1327 | event.Skip() |
---|
1328 | wx.CallAfter(SetNameVal) |
---|
1329 | |
---|
1330 | mainSizer = wx.BoxSizer(wx.VERTICAL) |
---|
1331 | topSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
1332 | topSizer.Add((-1,-1),1,wx.EXPAND,1) |
---|
1333 | topSizer.Add(wx.StaticText(G2frame.dataDisplay,label=' Sample and Experimental Parameters')) |
---|
1334 | topSizer.Add((-1,-1),1,wx.EXPAND,1) |
---|
1335 | mainSizer.Add(topSizer,0,wx.EXPAND,1) |
---|
1336 | nameSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
1337 | nameSizer.Add(wx.StaticText(G2frame.dataDisplay,wx.ID_ANY,'Instrument Name'), |
---|
1338 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1339 | nameSizer.Add((-1,-1),1,wx.EXPAND,1) |
---|
1340 | instNameVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY,data.get('InstrName',''), |
---|
1341 | size=(200,-1),style=wx.TE_PROCESS_ENTER) |
---|
1342 | nameSizer.Add(instNameVal) |
---|
1343 | instNameVal.Bind(wx.EVT_CHAR,OnNameVal) |
---|
1344 | mainSizer.Add(nameSizer,0,wx.EXPAND,1) |
---|
1345 | mainSizer.Add((0,5),0) |
---|
1346 | |
---|
1347 | mainSizer.Add((5,5),0) |
---|
1348 | parmSizer = wx.FlexGridSizer(10,2,5,0) |
---|
1349 | scaleRef = wx.CheckBox(G2frame.dataDisplay,label=' Histogram scale factor: ') |
---|
1350 | scaleRef.SetValue(data['Scale'][1]) |
---|
1351 | scaleRef.Bind(wx.EVT_CHECKBOX, OnScaleRef) |
---|
1352 | parmSizer.Add(scaleRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1353 | scaleVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY, |
---|
1354 | '%.4f'%(data['Scale'][0]),style=wx.TE_PROCESS_ENTER) |
---|
1355 | scaleVal.Bind(wx.EVT_TEXT_ENTER,OnScaleVal) |
---|
1356 | scaleVal.Bind(wx.EVT_KILL_FOCUS,OnScaleVal) |
---|
1357 | parmSizer.Add(scaleVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1358 | typeSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
1359 | choices = ['Debye-Scherrer','Bragg-Brentano',] |
---|
1360 | histoType = wx.ComboBox(G2frame.dataDisplay,wx.ID_ANY,value=data['Type'],choices=choices, |
---|
1361 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
1362 | histoType.Bind(wx.EVT_COMBOBOX, OnHistoType) |
---|
1363 | parmSizer.Add(histoType) |
---|
1364 | parmSizer.Add((5,5),0) |
---|
1365 | |
---|
1366 | for parm in parms: |
---|
1367 | if 'list' in str(type(data[parm[0]])): |
---|
1368 | parmRef = wx.CheckBox(G2frame.dataDisplay,label=parm[1]) |
---|
1369 | objList[parmRef.GetId()] = parm[0] |
---|
1370 | parmRef.SetValue(data[parm[0]][1]) |
---|
1371 | parmRef.Bind(wx.EVT_CHECKBOX, OnParmRef) |
---|
1372 | parmSizer.Add(parmRef,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1373 | parmVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY, |
---|
1374 | parm[2]%(data[parm[0]][0]),style=wx.TE_PROCESS_ENTER) |
---|
1375 | else: |
---|
1376 | parmSizer.Add(wx.StaticText(G2frame.dataDisplay,label=parm[1]), |
---|
1377 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1378 | parmVal = wx.TextCtrl(G2frame.dataDisplay,wx.ID_ANY, |
---|
1379 | parm[2]%(data[parm[0]]),style=wx.TE_PROCESS_ENTER) |
---|
1380 | objList[parmVal.GetId()] = parm |
---|
1381 | parmVal.Bind(wx.EVT_TEXT_ENTER,OnParmVal) |
---|
1382 | parmVal.Bind(wx.EVT_KILL_FOCUS,OnParmVal) |
---|
1383 | parmSizer.Add(parmVal,1,wx.EXPAND) |
---|
1384 | mainSizer.Add(parmSizer) |
---|
1385 | mainSizer.Add((0,5),0) |
---|
1386 | |
---|
1387 | mainSizer.Layout() |
---|
1388 | G2frame.dataDisplay.SetSizer(mainSizer) |
---|
1389 | Size = mainSizer.Fit(G2frame.dataFrame) |
---|
1390 | G2frame.dataDisplay.SetSize(Size) |
---|
1391 | G2frame.dataFrame.setSizePosLeft(Size) |
---|
1392 | |
---|
1393 | ################################################################################ |
---|
1394 | ##### Indexing Peaks |
---|
1395 | ################################################################################ |
---|
1396 | |
---|
1397 | def UpdateIndexPeaksGrid(G2frame, data): |
---|
1398 | '''respond to selection of PWDR Index Peak List data |
---|
1399 | tree item. |
---|
1400 | ''' |
---|
1401 | IndexId = G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Index Peak List') |
---|
1402 | Inst = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Instrument Parameters'))[0] |
---|
1403 | wave = G2mth.getWave(Inst) |
---|
1404 | |
---|
1405 | def RefreshIndexPeaksGrid(event): |
---|
1406 | r,c = event.GetRow(),event.GetCol() |
---|
1407 | data = G2frame.IndexPeaksTable.GetData() |
---|
1408 | if c == 2: |
---|
1409 | if data[r][c]: |
---|
1410 | data[r][c] = False |
---|
1411 | else: |
---|
1412 | data[r][c] = True |
---|
1413 | G2frame.IndexPeaksTable.SetData(data) |
---|
1414 | G2frame.PatternTree.SetItemPyData(IndexId,data) |
---|
1415 | G2frame.dataDisplay.ForceRefresh() |
---|
1416 | |
---|
1417 | def OnReload(event): |
---|
1418 | data = [] |
---|
1419 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Peak List')) |
---|
1420 | for peak in peaks: |
---|
1421 | dsp = wave/(2.0*sind((peak[0]-Inst['Zero'][1])/2.0)) |
---|
1422 | data.append([peak[0],peak[2],True,False,0,0,0,dsp,0.0]) |
---|
1423 | G2frame.PatternTree.SetItemPyData(IndexId,data) |
---|
1424 | UpdateIndexPeaksGrid(G2frame,data) |
---|
1425 | |
---|
1426 | def KeyEditPickGrid(event): |
---|
1427 | colList = G2frame.dataDisplay.GetSelectedCols() |
---|
1428 | rowList = G2frame.dataDisplay.GetSelectedRows() |
---|
1429 | data = G2frame.PatternTree.GetItemPyData(IndexId) |
---|
1430 | if event.GetKeyCode() == wx.WXK_RETURN: |
---|
1431 | event.Skip(True) |
---|
1432 | elif event.GetKeyCode() == wx.WXK_CONTROL: |
---|
1433 | event.Skip(True) |
---|
1434 | elif event.GetKeyCode() == wx.WXK_SHIFT: |
---|
1435 | event.Skip(True) |
---|
1436 | elif colList: |
---|
1437 | G2frame.dataDisplay.ClearSelection() |
---|
1438 | key = event.GetKeyCode() |
---|
1439 | for col in colList: |
---|
1440 | if G2frame.IndexPeaksTable.GetColLabelValue(col) in ['use','refine']: |
---|
1441 | if key == 89: #'Y' |
---|
1442 | for row in range(G2frame.IndexPeaksTable.GetNumberRows()): data[row][col]=True |
---|
1443 | elif key == 78: #'N' |
---|
1444 | for row in range(G2frame.IndexPeaksTable.GetNumberRows()): data[row][col]=False |
---|
1445 | |
---|
1446 | if G2frame.dataDisplay: |
---|
1447 | G2frame.dataFrame.Clear() |
---|
1448 | if not G2frame.dataFrame.GetStatusBar(): |
---|
1449 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
1450 | if 'PWD' in G2frame.PatternTree.GetItemText(G2frame.PatternId): |
---|
1451 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.IndPeaksMenu) |
---|
1452 | G2frame.Bind(wx.EVT_MENU, OnReload, id=G2gd.wxID_INDXRELOAD) |
---|
1453 | G2frame.dataFrame.IndexPeaks.Enable(False) |
---|
1454 | G2frame.IndexPeaksTable = [] |
---|
1455 | if data: |
---|
1456 | G2frame.dataFrame.IndexPeaks.Enable(True) |
---|
1457 | cells = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Unit Cells List')) |
---|
1458 | if cells: |
---|
1459 | cellist = cells[2] |
---|
1460 | dmin = cells[3] |
---|
1461 | G2frame.HKL = [] |
---|
1462 | for i,cell in enumerate(cellist): |
---|
1463 | if cell[-1]: |
---|
1464 | ibrav = cell[2] |
---|
1465 | A = G2lat.cell2A(cell[3:9]) |
---|
1466 | G2frame.HKL = G2lat.GenHBravais(dmin,ibrav,A) |
---|
1467 | G2indx.IndexPeaks(data,G2frame.HKL) |
---|
1468 | for hkl in G2frame.HKL: |
---|
1469 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+Inst['Zero'][1]) |
---|
1470 | rowLabels = [] |
---|
1471 | for i in range(len(data)): rowLabels.append(str(i+1)) |
---|
1472 | colLabels = ['position','intensity','use','indexed','h','k','l','d-obs','d-calc'] |
---|
1473 | Types = [wg.GRID_VALUE_FLOAT+':10,4',wg.GRID_VALUE_FLOAT+':10,1',wg.GRID_VALUE_BOOL, |
---|
1474 | wg.GRID_VALUE_BOOL,wg.GRID_VALUE_LONG,wg.GRID_VALUE_LONG,wg.GRID_VALUE_LONG, |
---|
1475 | wg.GRID_VALUE_FLOAT+':10,5',wg.GRID_VALUE_FLOAT+':10,5'] |
---|
1476 | G2frame.PatternTree.SetItemPyData(IndexId,data) |
---|
1477 | G2frame.IndexPeaksTable = G2gd.Table(data,rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
1478 | G2frame.dataFrame.SetLabel('Index Peak List') |
---|
1479 | G2frame.dataDisplay = G2gd.GSGrid(parent=G2frame.dataFrame) |
---|
1480 | G2frame.dataDisplay.SetTable(G2frame.IndexPeaksTable, True) |
---|
1481 | for r in range(G2frame.dataDisplay.GetNumberRows()): |
---|
1482 | for c in range(G2frame.dataDisplay.GetNumberCols()): |
---|
1483 | if c == 2: |
---|
1484 | G2frame.dataDisplay.SetReadOnly(r,c,isReadOnly=False) |
---|
1485 | else: |
---|
1486 | G2frame.dataDisplay.SetReadOnly(r,c,isReadOnly=True) |
---|
1487 | G2frame.dataDisplay.Bind(wg.EVT_GRID_CELL_LEFT_CLICK, RefreshIndexPeaksGrid) |
---|
1488 | G2frame.dataDisplay.Bind(wx.EVT_KEY_DOWN, KeyEditPickGrid) |
---|
1489 | G2frame.dataDisplay.SetMargins(0,0) |
---|
1490 | G2frame.dataDisplay.AutoSizeColumns(False) |
---|
1491 | G2frame.dataFrame.setSizePosLeft([490,300]) |
---|
1492 | |
---|
1493 | ################################################################################ |
---|
1494 | ##### Unit cells |
---|
1495 | ################################################################################ |
---|
1496 | |
---|
1497 | def UpdateUnitCellsGrid(G2frame, data): |
---|
1498 | '''respond to selection of PWDR Unit Cells data tree item. |
---|
1499 | ''' |
---|
1500 | UnitCellsId = G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Unit Cells List') |
---|
1501 | SPGlist = G2spc.spglist |
---|
1502 | bravaisSymb = ['Fm3m','Im3m','Pm3m','R3-H','P6/mmm','I4/mmm', |
---|
1503 | 'P4/mmm','Fmmm','Immm','Cmmm','Pmmm','C2/m','P2/m','P1'] |
---|
1504 | spaceGroups = ['F m 3 m','I m 3 m','P m 3 m','R 3 m','P 6/m m m','I 4/m m m', |
---|
1505 | 'P 4/m m m','F m m m','I m m m','C m m m','P m m m','C 2/m','P 2/m','P -1'] |
---|
1506 | Inst = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Instrument Parameters'))[0] |
---|
1507 | wave = G2mth.getWave(Inst) |
---|
1508 | |
---|
1509 | def SetLattice(controls): |
---|
1510 | ibrav = bravaisSymb.index(controls[5]) |
---|
1511 | if ibrav in [0,1,2]: |
---|
1512 | controls[7] = controls[8] = controls[6] |
---|
1513 | controls[9] = controls[10] = controls[11] = 90. |
---|
1514 | elif ibrav in [3,4,5,6]: |
---|
1515 | controls[7] = controls[6] |
---|
1516 | controls[9] = controls[10] = controls[11] = 90. |
---|
1517 | if ibrav in [3,4]: |
---|
1518 | controls[11] = 120. |
---|
1519 | elif ibrav in [7,8,9,10]: |
---|
1520 | controls[9] = controls[10] = controls[11] = 90. |
---|
1521 | elif ibrav in [11,12]: |
---|
1522 | controls[9] = controls[11] = 90. # b unique |
---|
1523 | if len(controls) < 13: controls.append(0) |
---|
1524 | controls[12] = G2lat.calc_V(G2lat.cell2A(controls[6:12])) |
---|
1525 | return ibrav |
---|
1526 | |
---|
1527 | def OnNcNo(event): |
---|
1528 | controls[2] = NcNo.GetValue() |
---|
1529 | |
---|
1530 | def OnStartVol(event): |
---|
1531 | try: |
---|
1532 | stVol = int(float(startVol.GetValue())) |
---|
1533 | if stVol < 25: |
---|
1534 | raise ValueError |
---|
1535 | except ValueError: |
---|
1536 | stVol = 25 |
---|
1537 | controls[3] = stVol |
---|
1538 | startVol.SetValue("%d"%(stVol)) |
---|
1539 | |
---|
1540 | def OnBravais(event): |
---|
1541 | Obj = event.GetEventObject() |
---|
1542 | bravais[bravList.index(Obj.GetId())] = Obj.GetValue() |
---|
1543 | |
---|
1544 | def OnZero(event): |
---|
1545 | try: |
---|
1546 | Zero = min(5.0,max(-5.0,float(zero.GetValue()))) |
---|
1547 | except ValueError: |
---|
1548 | Zero = 0.0 |
---|
1549 | controls[1] = Zero |
---|
1550 | zero.SetValue("%.4f"%(Zero)) |
---|
1551 | |
---|
1552 | def OnZeroVar(event): |
---|
1553 | controls[0] = zeroVar.GetValue() |
---|
1554 | |
---|
1555 | def OnBravSel(event): |
---|
1556 | brav = bravSel.GetString(bravSel.GetSelection()) |
---|
1557 | controls[5] = brav |
---|
1558 | controls[13] = SPGlist[brav][0] |
---|
1559 | wx.CallAfter(UpdateUnitCellsGrid,G2frame,data) |
---|
1560 | |
---|
1561 | def OnSpcSel(event): |
---|
1562 | controls[13] = spcSel.GetString(spcSel.GetSelection()) |
---|
1563 | |
---|
1564 | def OnCellChange(event): |
---|
1565 | ibrav = bravaisSymb.index(controls[5]) |
---|
1566 | Obj = event.GetEventObject() |
---|
1567 | ObjId = cellList.index(Obj.GetId()) |
---|
1568 | try: |
---|
1569 | value = max(1.0,float(Obj.GetValue())) |
---|
1570 | except ValueError: |
---|
1571 | if ObjId < 3: #bad cell edge - reset |
---|
1572 | value = controls[6+ObjId] |
---|
1573 | else: #bad angle |
---|
1574 | value = 90. |
---|
1575 | if ibrav in [0,1,2]: |
---|
1576 | controls[6] = controls[7] = controls[8] = value |
---|
1577 | controls[9] = controls[10] = controls[11] = 90.0 |
---|
1578 | Obj.SetValue("%.5f"%(controls[6])) |
---|
1579 | elif ibrav in [3,4,5,6]: |
---|
1580 | if ObjId == 0: |
---|
1581 | controls[6] = controls[7] = value |
---|
1582 | Obj.SetValue("%.5f"%(controls[6])) |
---|
1583 | else: |
---|
1584 | controls[8] = value |
---|
1585 | Obj.SetValue("%.5f"%(controls[8])) |
---|
1586 | controls[9] = controls[10] = controls[11] = 90.0 |
---|
1587 | if ibrav in [3,4]: |
---|
1588 | controls[11] = 120. |
---|
1589 | elif ibrav in [7,8,9,10]: |
---|
1590 | controls[6+ObjId] = value |
---|
1591 | Obj.SetValue("%.5f"%(controls[6+ObjId])) |
---|
1592 | controls[9] = controls[10] = controls[11] = 90.0 |
---|
1593 | elif ibrav in [11,12]: |
---|
1594 | controls[9] = controls[11] = 90.0 |
---|
1595 | if ObjId != 3: |
---|
1596 | controls[6+ObjId] = value |
---|
1597 | Obj.SetValue("%.5f"%(controls[6+ObjId])) |
---|
1598 | else: |
---|
1599 | controls[10] = value |
---|
1600 | Obj.SetValue("%.3f"%(controls[10])) |
---|
1601 | else: |
---|
1602 | controls[6+ObjId] = value |
---|
1603 | if ObjId < 3: |
---|
1604 | Obj.SetValue("%.5f"%(controls[6+ObjId])) |
---|
1605 | else: |
---|
1606 | Obj.SetValue("%.3f"%(controls[6+ObjId])) |
---|
1607 | controls[12] = G2lat.calc_V(G2lat.cell2A(controls[6:12])) |
---|
1608 | volVal.SetValue("%.3f"%(controls[12])) |
---|
1609 | |
---|
1610 | def OnHklShow(event): |
---|
1611 | PatternId = G2frame.PatternId |
---|
1612 | PickId = G2frame.PickId |
---|
1613 | limits = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Limits'))[1] |
---|
1614 | controls,bravais,cells,dmin = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Unit Cells List')) |
---|
1615 | cell = controls[6:12] |
---|
1616 | A = G2lat.cell2A(cell) |
---|
1617 | ibrav = bravaisSymb.index(controls[5]) |
---|
1618 | spc = controls[13] |
---|
1619 | SGData = G2spc.SpcGroup(spc)[1] |
---|
1620 | dmin = wave/(2.0*sind(limits[1]/2.0)) |
---|
1621 | G2frame.HKL = G2pwd.getHKLpeak(dmin,SGData,A) |
---|
1622 | for hkl in G2frame.HKL: |
---|
1623 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+controls[1]+Inst['Zero'][1]) |
---|
1624 | if 'PKS' in G2frame.PatternTree.GetItemText(G2frame.PatternId): |
---|
1625 | G2plt.PlotPowderLines(G2frame) |
---|
1626 | else: |
---|
1627 | G2plt.PlotPatterns(G2frame) |
---|
1628 | |
---|
1629 | def OnSortCells(event): |
---|
1630 | controls,bravais,cells,dmin = G2frame.PatternTree.GetItemPyData(UnitCellsId) |
---|
1631 | c = event.GetCol() |
---|
1632 | if colLabels[c] == 'M20': |
---|
1633 | cells = G2indx.sortM20(cells) |
---|
1634 | elif colLabels[c] == 'Volume': |
---|
1635 | cells = G2indx.sortVolume(cells) |
---|
1636 | else: |
---|
1637 | return |
---|
1638 | data = [controls,bravais,cells,dmin] |
---|
1639 | G2frame.PatternTree.SetItemPyData(UnitCellsId,data) |
---|
1640 | wx.CallAfter(UpdateUnitCellsGrid,G2frame,data) |
---|
1641 | |
---|
1642 | def CopyUnitCell(event): |
---|
1643 | controls,bravais,cells,dmin = G2frame.PatternTree.GetItemPyData(UnitCellsId) |
---|
1644 | for Cell in cells: |
---|
1645 | if Cell[-2]: |
---|
1646 | break |
---|
1647 | cell = Cell[2:9] |
---|
1648 | controls[4] = 1 |
---|
1649 | controls[5] = bravaisSymb[cell[0]] |
---|
1650 | controls[6:12] = cell[1:8] |
---|
1651 | controls[12] = G2lat.calc_V(G2lat.cell2A(controls[6:12])) |
---|
1652 | controls[13] = spaceGroups[bravaisSymb.index(controls[5])] |
---|
1653 | G2frame.PatternTree.SetItemPyData(UnitCellsId,[controls,bravais,cells,dmin]) |
---|
1654 | G2frame.dataFrame.RefineCell.Enable(True) |
---|
1655 | wx.CallAfter(UpdateUnitCellsGrid,G2frame,data) |
---|
1656 | |
---|
1657 | def RefineCell(event): |
---|
1658 | def cellPrint(ibrav,A): |
---|
1659 | cell = G2lat.A2cell(A) |
---|
1660 | Vol = G2lat.calc_V(A) |
---|
1661 | if ibrav in [0,1,2]: |
---|
1662 | print "%s%10.6f" % ('a =',cell[0]) |
---|
1663 | elif ibrav in [3,4,5,6]: |
---|
1664 | print "%s%10.6f %s%10.6f %s%12.3f" % ('a =',cell[0],' c =',cell[2],' volume =',Vol) |
---|
1665 | elif ibrav in [7,8,9,10]: |
---|
1666 | print "%s%10.6f %s%10.6f %s%10.6f %s%12.3f" % ('a =',cell[0],'b =',cell[1],'c =',cell[2],' volume =',Vol) |
---|
1667 | elif ibrav in [11,12]: |
---|
1668 | print "%s%10.6f %s%10.6f %s%10.6f %s%8.3f %s%12.3f" % ('a =',cell[0],'b =',cell[1],'c =',cell[2],'beta =',cell[4],' volume =',Vol) |
---|
1669 | else: |
---|
1670 | print "%s%10.6f %s%10.6f %s%10.6f" % ('a =',cell[0],'b =',cell[1],'c =',cell[2]) |
---|
1671 | print "%s%8.3f %s%8.3f %s%8.3f %s%12.3f" % ('alpha =',cell[3],'beta =',cell[4],'gamma =',cell[5],' volume =',Vol) |
---|
1672 | |
---|
1673 | PatternId = G2frame.PatternId |
---|
1674 | PickId = G2frame.PickId |
---|
1675 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Index Peak List')) |
---|
1676 | if not peaks: |
---|
1677 | G2frame.ErrorDialog('No peaks!', 'Nothing to refine!') |
---|
1678 | return |
---|
1679 | print 'Refine cell' |
---|
1680 | controls,bravais,cells,dmin = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Unit Cells List')) |
---|
1681 | cell = controls[6:12] |
---|
1682 | A = G2lat.cell2A(cell) |
---|
1683 | ibrav = bravaisSymb.index(controls[5]) |
---|
1684 | SGData = G2spc.SpcGroup(controls[13])[1] |
---|
1685 | dmin = G2indx.getDmin(peaks)-0.005 |
---|
1686 | G2frame.HKL = G2pwd.getHKLpeak(dmin,SGData,A) |
---|
1687 | G2indx.IndexPeaks(peaks,G2frame.HKL) |
---|
1688 | Lhkl,M20,X20,Aref,Zero = G2indx.refinePeaksZ(peaks,wave,ibrav,A,controls[1],controls[0]) |
---|
1689 | controls[1] = Zero |
---|
1690 | controls[6:12] = G2lat.A2cell(Aref) |
---|
1691 | controls[12] = G2lat.calc_V(Aref) |
---|
1692 | data = [controls,bravais,cells,dmin] |
---|
1693 | cells = G2frame.PatternTree.GetItemPyData(UnitCellsId)[2] |
---|
1694 | for cell in cells: |
---|
1695 | cell[-2] = False |
---|
1696 | cells.insert(0,[M20,X20,ibrav]+controls[6:13]+[True,False]) |
---|
1697 | data[2] = cells |
---|
1698 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Unit Cells List'),data) |
---|
1699 | G2frame.HKL = G2lat.GenHBravais(dmin,ibrav,Aref) |
---|
1700 | print "%s%10.3f" % ('refinement M20 = ',M20) |
---|
1701 | print 'unindexed lines = ',X20 |
---|
1702 | cellPrint(ibrav,Aref) |
---|
1703 | for hkl in G2frame.HKL: |
---|
1704 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+controls[1]+Inst['Zero'][1]) |
---|
1705 | if 'PKS' in G2frame.PatternTree.GetItemText(G2frame.PatternId): |
---|
1706 | G2plt.PlotPowderLines(G2frame) |
---|
1707 | else: |
---|
1708 | G2plt.PlotPatterns(G2frame) |
---|
1709 | wx.CallAfter(UpdateUnitCellsGrid,G2frame,data) |
---|
1710 | |
---|
1711 | def IndexPeaks(event): |
---|
1712 | PatternId = G2frame.PatternId |
---|
1713 | print 'Peak Indexing' |
---|
1714 | keepcells = [] |
---|
1715 | try: |
---|
1716 | controls,bravais,cells,dmin = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Unit Cells List')) |
---|
1717 | for cell in cells: |
---|
1718 | if cell[11]: |
---|
1719 | keepcells.append(cell) |
---|
1720 | except IndexError: |
---|
1721 | pass |
---|
1722 | except ValueError: |
---|
1723 | G2frame.ErrorDialog('Error','Need to set controls in Unit Cell List first') |
---|
1724 | return |
---|
1725 | if True not in bravais: |
---|
1726 | G2frame.ErrorDialog('Error','No Bravais lattices selected') |
---|
1727 | return |
---|
1728 | G2frame.dataFrame.CopyCell.Enable(False) |
---|
1729 | G2frame.dataFrame.RefineCell.Enable(False) |
---|
1730 | OK,dmin,newcells = G2indx.DoIndexPeaks(peaks,wave,controls,bravais) |
---|
1731 | cells = keepcells+newcells |
---|
1732 | cells = G2indx.sortM20(cells) |
---|
1733 | cells[0][10] = True |
---|
1734 | if OK: |
---|
1735 | data = [controls,bravais,cells,dmin] |
---|
1736 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PatternId, 'Unit Cells List'),data) |
---|
1737 | bestCell = cells[0] |
---|
1738 | if bestCell[0] > 10.: |
---|
1739 | G2frame.HKL = G2lat.GenHBravais(dmin,bestCell[2],G2lat.cell2A(bestCell[3:9])) |
---|
1740 | for hkl in G2frame.HKL: |
---|
1741 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+controls[1]+Inst['Zero'][1]) |
---|
1742 | if 'PKS' in G2frame.PatternTree.GetItemText(G2frame.PatternId): |
---|
1743 | G2plt.PlotPowderLines(G2frame) |
---|
1744 | else: |
---|
1745 | G2plt.PlotPatterns(G2frame) |
---|
1746 | G2frame.dataFrame.CopyCell.Enable(True) |
---|
1747 | G2frame.dataFrame.IndexPeaks.Enable(True) |
---|
1748 | G2frame.dataFrame.MakeNewPhase.Enable(True) |
---|
1749 | wx.CallAfter(UpdateUnitCellsGrid,G2frame,data) |
---|
1750 | |
---|
1751 | def RefreshUnitCellsGrid(event): |
---|
1752 | data =G2frame.PatternTree.GetItemPyData(UnitCellsId) |
---|
1753 | cells,dmin = data[2:] |
---|
1754 | r,c = event.GetRow(),event.GetCol() |
---|
1755 | if cells: |
---|
1756 | if c == 2: |
---|
1757 | for i in range(len(cells)): |
---|
1758 | cells[i][-2] = False |
---|
1759 | UnitCellsTable.SetValue(i,c,False) |
---|
1760 | UnitCellsTable.SetValue(r,c,True) |
---|
1761 | gridDisplay.ForceRefresh() |
---|
1762 | cells[r][-2] = True |
---|
1763 | ibrav = cells[r][2] |
---|
1764 | A = G2lat.cell2A(cells[r][3:9]) |
---|
1765 | G2frame.HKL = G2lat.GenHBravais(dmin,ibrav,A) |
---|
1766 | for hkl in G2frame.HKL: |
---|
1767 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+controls[1]+Inst['Zero'][1]) |
---|
1768 | if 'PKS' in G2frame.PatternTree.GetItemText(G2frame.PatternId): |
---|
1769 | G2plt.PlotPowderLines(G2frame) |
---|
1770 | else: |
---|
1771 | G2plt.PlotPatterns(G2frame) |
---|
1772 | elif c == 11: |
---|
1773 | if UnitCellsTable.GetValue(r,c): |
---|
1774 | UnitCellsTable.SetValue(r,c,False) |
---|
1775 | cells[r][c] = False |
---|
1776 | else: |
---|
1777 | cells[r][c] = True |
---|
1778 | UnitCellsTable.SetValue(r,c,True) |
---|
1779 | gridDisplay.ForceRefresh() |
---|
1780 | G2frame.PatternTree.SetItemPyData(UnitCellsId,data) |
---|
1781 | |
---|
1782 | def MakeNewPhase(event): |
---|
1783 | if not G2gd.GetPatternTreeItemId(G2frame,G2frame.root,'Phases'): |
---|
1784 | sub = G2frame.PatternTree.AppendItem(parent=G2frame.root,text='Phases') |
---|
1785 | else: |
---|
1786 | sub = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,'Phases') |
---|
1787 | PhaseName = '' |
---|
1788 | dlg = wx.TextEntryDialog(None,'Enter a name for this phase','Phase Name Entry','New phase', |
---|
1789 | style=wx.OK) |
---|
1790 | try: |
---|
1791 | if dlg.ShowModal() == wx.ID_OK: |
---|
1792 | PhaseName = dlg.GetValue() |
---|
1793 | cells = G2frame.PatternTree.GetItemPyData(UnitCellsId)[2] |
---|
1794 | for Cell in cells: |
---|
1795 | if Cell[-2]: |
---|
1796 | break |
---|
1797 | cell = Cell[2:10] |
---|
1798 | sub = G2frame.PatternTree.AppendItem(parent=sub,text=PhaseName) |
---|
1799 | E,SGData = G2spc.SpcGroup(controls[13]) |
---|
1800 | G2frame.PatternTree.SetItemPyData(sub, \ |
---|
1801 | G2IO.SetNewPhase(Name=PhaseName,SGData=SGData,cell=cell[1:])) |
---|
1802 | Status.SetStatusText('Change space group if needed') |
---|
1803 | finally: |
---|
1804 | dlg.Destroy() |
---|
1805 | |
---|
1806 | if G2frame.dataDisplay: |
---|
1807 | G2frame.dataFrame.Clear() |
---|
1808 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.IndexMenu) |
---|
1809 | if not G2frame.dataFrame.GetStatusBar(): |
---|
1810 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
1811 | G2frame.Bind(wx.EVT_MENU, IndexPeaks, id=G2gd.wxID_INDEXPEAKS) |
---|
1812 | G2frame.Bind(wx.EVT_MENU, CopyUnitCell, id=G2gd.wxID_COPYCELL) |
---|
1813 | G2frame.Bind(wx.EVT_MENU, RefineCell, id=G2gd.wxID_REFINECELL) |
---|
1814 | G2frame.Bind(wx.EVT_MENU, MakeNewPhase, id=G2gd.wxID_MAKENEWPHASE) |
---|
1815 | |
---|
1816 | controls,bravais,cells,dmin = data |
---|
1817 | if len(controls) < 13: #add cell volume if missing |
---|
1818 | controls.append(G2lat.calc_V(G2lat.cell2A(controls[6:12]))) |
---|
1819 | if len(controls) < 14: #add space gropu used in indexing |
---|
1820 | controls.append(spaceGroups[bravaisSymb.index(controls[5])]) |
---|
1821 | G2frame.PatternTree.SetItemPyData(UnitCellsId,data) #update with volume |
---|
1822 | bravaisNames = ['Cubic-F','Cubic-I','Cubic-P','Trigonal-R','Trigonal/Hexagonal-P', |
---|
1823 | 'Tetragonal-I','Tetragonal-P','Orthorhombic-F','Orthorhombic-I','Orthorhombic-C', |
---|
1824 | 'Orthorhombic-P','Monoclinic-C','Monoclinic-P','Triclinic'] |
---|
1825 | cellGUIlist = [[[0,1,2],4,zip([" Unit cell: a = "," Vol = "],["%.5f","%.3f"],[True,False],[0,0])], |
---|
1826 | [[3,4,5,6],6,zip([" Unit cell: a = "," c = "," Vol = "],["%.5f","%.5f","%.3f"],[True,True,False],[0,2,0])], |
---|
1827 | [[7,8,9,10],8,zip([" Unit cell: a = "," b = "," c = "," Vol = "],["%.5f","%.5f","%.5f","%.3f"], |
---|
1828 | [True,True,True,False],[0,1,2,0])], |
---|
1829 | [[11,12],10,zip([" Unit cell: a = "," b = "," c = "," beta = "," Vol = "], |
---|
1830 | ["%.5f","%.5f","%.5f","%.3f","%.3f"],[True,True,True,True,False],[0,1,2,4,0])], |
---|
1831 | [[13,],8,zip([" Unit cell: a = "," b = "," c = "," Vol = "," alpha = "," beta = "," gamma = "], |
---|
1832 | ["%.5f","%.5f","%.5f","%.3f","%.3f","%.3f","%.3f"], |
---|
1833 | [True,True,True,False,True,True,True],[0,1,2,0,3,4,5])]] |
---|
1834 | |
---|
1835 | G2frame.dataFrame.SetLabel('Unit Cells List') |
---|
1836 | G2frame.sp = wx.SplitterWindow(G2frame.dataFrame) |
---|
1837 | G2frame.dataDisplay = wx.Panel(G2frame.sp, style=wx.SUNKEN_BORDER) |
---|
1838 | G2frame.dataFrame.IndexPeaks.Enable(False) |
---|
1839 | peaks = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.PatternId, 'Index Peak List')) |
---|
1840 | if peaks: |
---|
1841 | G2frame.dataFrame.IndexPeaks.Enable(True) |
---|
1842 | G2frame.dataFrame.RefineCell.Enable(False) |
---|
1843 | if controls[12] > 1.0: #if a "real" volume (i.e. not default) |
---|
1844 | G2frame.dataFrame.RefineCell.Enable(True) |
---|
1845 | G2frame.dataFrame.CopyCell.Enable(False) |
---|
1846 | G2frame.dataFrame.MakeNewPhase.Enable(False) |
---|
1847 | if cells: |
---|
1848 | G2frame.bottom = wx.Panel(G2frame.sp, style=wx.SUNKEN_BORDER) |
---|
1849 | G2frame.sp.SplitHorizontally(G2frame.dataDisplay,G2frame.bottom,0) |
---|
1850 | G2frame.dataFrame.CopyCell.Enable(True) |
---|
1851 | G2frame.dataFrame.MakeNewPhase.Enable(True) |
---|
1852 | mainSizer = wx.BoxSizer(wx.VERTICAL) |
---|
1853 | mainSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' Indexing controls: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1854 | mainSizer.Add((5,5),0) |
---|
1855 | littleSizer = wx.FlexGridSizer(2,5,5,5) |
---|
1856 | littleSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' Max Nc/Nobs '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1857 | NcNo = wx.SpinCtrl(G2frame.dataDisplay) |
---|
1858 | NcNo.SetRange(1,6) |
---|
1859 | NcNo.SetValue(controls[2]) |
---|
1860 | NcNo.Bind(wx.EVT_SPINCTRL,OnNcNo) |
---|
1861 | littleSizer.Add(NcNo,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1862 | littleSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' Start Volume '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1863 | startVol = wx.TextCtrl(G2frame.dataDisplay,value=str('%d'%(controls[3])),style=wx.TE_PROCESS_ENTER) |
---|
1864 | startVol.Bind(wx.EVT_TEXT_ENTER,OnStartVol) |
---|
1865 | startVol.Bind(wx.EVT_KILL_FOCUS,OnStartVol) |
---|
1866 | littleSizer.Add(startVol,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1867 | mainSizer.Add(littleSizer,0) |
---|
1868 | mainSizer.Add((5,5),0) |
---|
1869 | mainSizer.Add(wx.StaticText(G2frame.dataDisplay,label=' Select Bravais Lattices for indexing: '), |
---|
1870 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
1871 | mainSizer.Add((5,5),0) |
---|
1872 | littleSizer = wx.FlexGridSizer(2,7,5,5) |
---|
1873 | bravList = [] |
---|
1874 | bravs = zip(bravais,bravaisNames) |
---|
1875 | for brav,bravName in bravs: |
---|
1876 | bravCk = wx.CheckBox(G2frame.dataDisplay,label=bravName) |
---|
1877 | bravList.append(bravCk.GetId()) |
---|
1878 | bravCk.SetValue(brav) |
---|
1879 | bravCk.Bind(wx.EVT_CHECKBOX,OnBravais) |
---|
1880 | littleSizer.Add(bravCk,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1881 | mainSizer.Add(littleSizer,0) |
---|
1882 | mainSizer.Add((5,5),0) |
---|
1883 | |
---|
1884 | mainSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' Cell Refinement: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1885 | mainSizer.Add((5,5),0) |
---|
1886 | littleSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
1887 | littleSizer.Add(wx.StaticText(G2frame.dataDisplay,label=" Bravais lattice "),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1888 | bravSel = wx.Choice(G2frame.dataDisplay,choices=bravaisSymb) |
---|
1889 | bravSel.SetSelection(bravaisSymb.index(controls[5])) |
---|
1890 | bravSel.Bind(wx.EVT_CHOICE,OnBravSel) |
---|
1891 | littleSizer.Add(bravSel,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1892 | littleSizer.Add(wx.StaticText(G2frame.dataDisplay,label=" Space group "),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1893 | spcSel = wx.Choice(G2frame.dataDisplay,choices=SPGlist[controls[5]]) |
---|
1894 | spcSel.SetSelection(SPGlist[controls[5]].index(controls[13])) |
---|
1895 | spcSel.Bind(wx.EVT_CHOICE,OnSpcSel) |
---|
1896 | littleSizer.Add(spcSel,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1897 | littleSizer.Add(wx.StaticText(G2frame.dataDisplay,label=" Zero offset"),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1898 | zero = wx.TextCtrl(G2frame.dataDisplay,value="%.4f"%(controls[1]),style=wx.TE_PROCESS_ENTER) |
---|
1899 | zero.Bind(wx.EVT_TEXT_ENTER,OnZero) |
---|
1900 | zero.Bind(wx.EVT_KILL_FOCUS,OnZero) |
---|
1901 | littleSizer.Add(zero,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1902 | zeroVar = wx.CheckBox(G2frame.dataDisplay,label="Refine?") |
---|
1903 | zeroVar.SetValue(controls[0]) |
---|
1904 | zeroVar.Bind(wx.EVT_CHECKBOX,OnZeroVar) |
---|
1905 | littleSizer.Add(zeroVar,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1906 | hklShow = wx.Button(G2frame.dataDisplay,label="Show hkl positions") |
---|
1907 | hklShow.Bind(wx.EVT_BUTTON,OnHklShow) |
---|
1908 | littleSizer.Add(hklShow,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1909 | mainSizer.Add(littleSizer,0) |
---|
1910 | |
---|
1911 | mainSizer.Add((5,5),0) |
---|
1912 | ibrav = SetLattice(controls) |
---|
1913 | for cellGUI in cellGUIlist: |
---|
1914 | if ibrav in cellGUI[0]: |
---|
1915 | useGUI = cellGUI |
---|
1916 | cellList = [] |
---|
1917 | littleSizer = wx.FlexGridSizer(2,useGUI[1],5,5) |
---|
1918 | for txt,fmt,ifEdit,Id in useGUI[2]: |
---|
1919 | littleSizer.Add(wx.StaticText(G2frame.dataDisplay,label=txt),0,wx.ALIGN_CENTER_VERTICAL) |
---|
1920 | if ifEdit: #a,b,c,etc. |
---|
1921 | cellVal = wx.TextCtrl(G2frame.dataDisplay,value=(fmt%(controls[6+Id])),style=wx.TE_PROCESS_ENTER) |
---|
1922 | cellVal.Bind(wx.EVT_TEXT_ENTER,OnCellChange) |
---|
1923 | cellVal.Bind(wx.EVT_KILL_FOCUS,OnCellChange) |
---|
1924 | littleSizer.Add(cellVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1925 | cellList.append(cellVal.GetId()) |
---|
1926 | else: #volume |
---|
1927 | volVal = wx.TextCtrl(G2frame.dataDisplay,value=(fmt%(controls[12])),style=wx.TE_READONLY) |
---|
1928 | volVal.SetBackgroundColour(VERY_LIGHT_GREY) |
---|
1929 | littleSizer.Add(volVal,0,wx.ALIGN_CENTER_VERTICAL) |
---|
1930 | mainSizer.Add(littleSizer,0) |
---|
1931 | |
---|
1932 | mainSizer.Layout() |
---|
1933 | G2frame.dataDisplay.SetSizer(mainSizer) |
---|
1934 | topSize = mainSizer.Fit(G2frame.dataFrame) |
---|
1935 | G2frame.dataDisplay.SetSize(topSize) |
---|
1936 | if cells: |
---|
1937 | if ibrav == 13: |
---|
1938 | topSize[1] += 230 |
---|
1939 | else: |
---|
1940 | topSize[1] += 200 |
---|
1941 | G2frame.dataFrame.setSizePosLeft(topSize) |
---|
1942 | |
---|
1943 | if cells: |
---|
1944 | bottomSize = topSize #screwy but bottom doesn't have a size in linux! |
---|
1945 | bottomSize[0] -= 20 #to reveal slider |
---|
1946 | if ibrav == 13: |
---|
1947 | bottomSize[1] -= 240 |
---|
1948 | else: |
---|
1949 | bottomSize[1] -= 210 |
---|
1950 | wx.StaticText(parent=G2frame.bottom,label=' Indexing Result ') |
---|
1951 | rowLabels = [] |
---|
1952 | colLabels = ['M20','X20','use','Bravais','a','b','c','alpha','beta','gamma','Volume','Keep'] |
---|
1953 | Types = [wg.GRID_VALUE_FLOAT+':10,2',wg.GRID_VALUE_NUMBER,wg.GRID_VALUE_BOOL,wg.GRID_VALUE_STRING,]+ \ |
---|
1954 | 3*[wg.GRID_VALUE_FLOAT+':10,5',]+3*[wg.GRID_VALUE_FLOAT+':10,3',]+ \ |
---|
1955 | [wg.GRID_VALUE_FLOAT+':10,2',wg.GRID_VALUE_BOOL] |
---|
1956 | numRows = len(cells) |
---|
1957 | table = [] |
---|
1958 | for cell in cells: |
---|
1959 | rowLabels.append('') |
---|
1960 | row = cell[0:2]+[cell[-2]]+[bravaisSymb[cell[2]]]+cell[3:10]+[cell[11],] |
---|
1961 | if cell[-2]: |
---|
1962 | A = G2lat.cell2A(cell[3:9]) |
---|
1963 | G2frame.HKL = G2lat.GenHBravais(dmin,cell[2],A) |
---|
1964 | for hkl in G2frame.HKL: |
---|
1965 | hkl.append(2.0*asind(wave/(2.*hkl[3]))+controls[1]+Inst['Zero'][1]) |
---|
1966 | table.append(row) |
---|
1967 | UnitCellsTable = G2gd.Table(table,rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
1968 | gridDisplay = G2gd.GSGrid(G2frame.bottom) |
---|
1969 | gridDisplay.SetPosition(wx.Point(0,20)) |
---|
1970 | gridDisplay.SetTable(UnitCellsTable, True) |
---|
1971 | G2frame.dataFrame.CopyCell.Enable(True) |
---|
1972 | gridDisplay.Bind(wg.EVT_GRID_CELL_LEFT_CLICK,RefreshUnitCellsGrid) |
---|
1973 | gridDisplay.Bind(wg.EVT_GRID_LABEL_LEFT_DCLICK,OnSortCells) |
---|
1974 | gridDisplay.SetMargins(0,0) |
---|
1975 | gridDisplay.SetRowLabelSize(0) |
---|
1976 | gridDisplay.AutoSizeColumns(False) |
---|
1977 | for r in range(gridDisplay.GetNumberRows()): |
---|
1978 | for c in range(gridDisplay.GetNumberCols()): |
---|
1979 | if c == 2: |
---|
1980 | gridDisplay.SetReadOnly(r,c,isReadOnly=False) |
---|
1981 | else: |
---|
1982 | gridDisplay.SetReadOnly(r,c,isReadOnly=True) |
---|
1983 | gridDisplay.SetSize(bottomSize) |
---|
1984 | |
---|
1985 | ################################################################################ |
---|
1986 | ##### Reflection list |
---|
1987 | ################################################################################ |
---|
1988 | |
---|
1989 | def UpdateReflectionGrid(G2frame,data,HKLF=False,Name=''): |
---|
1990 | '''respond to selection of PWDR Reflections data tree item. |
---|
1991 | ''' |
---|
1992 | if not data: |
---|
1993 | print 'No phases, no reflections' |
---|
1994 | return |
---|
1995 | if HKLF: |
---|
1996 | G2frame.RefList = 1 |
---|
1997 | phaseName = Name |
---|
1998 | else: |
---|
1999 | phaseName = G2frame.RefList |
---|
2000 | phases = data.keys() |
---|
2001 | |
---|
2002 | def OnSelectPhase(event): |
---|
2003 | dlg = wx.SingleChoiceDialog(G2frame,'Select','Phase',phases) |
---|
2004 | try: |
---|
2005 | if dlg.ShowModal() == wx.ID_OK: |
---|
2006 | sel = dlg.GetSelection() |
---|
2007 | G2frame.RefList = phases[sel] |
---|
2008 | UpdateReflectionGrid(G2frame,data) |
---|
2009 | finally: |
---|
2010 | dlg.Destroy() |
---|
2011 | G2plt.PlotPatterns(G2frame) |
---|
2012 | |
---|
2013 | if G2frame.dataDisplay: |
---|
2014 | G2frame.dataFrame.Clear() |
---|
2015 | rowLabels = [] |
---|
2016 | if HKLF: |
---|
2017 | G2gd.SetDataMenuBar(G2frame) |
---|
2018 | refs = data[1]['RefList'] |
---|
2019 | else: |
---|
2020 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.ReflMenu) |
---|
2021 | if not G2frame.dataFrame.GetStatusBar(): |
---|
2022 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
2023 | G2frame.Bind(wx.EVT_MENU, OnSelectPhase, id=G2gd.wxID_SELECTPHASE) |
---|
2024 | G2frame.dataFrame.SelectPhase.Enable(False) |
---|
2025 | if len(data) > 1: |
---|
2026 | G2frame.dataFrame.SelectPhase.Enable(True) |
---|
2027 | try: #patch for old reflection lists |
---|
2028 | refList = np.array(data[G2frame.RefList]['RefList']) |
---|
2029 | I100 = refList.T[8]*refList.T[11] |
---|
2030 | except TypeError: |
---|
2031 | refList = np.array([refl[:11] for refl in data[G2frame.RefList]]) |
---|
2032 | I100 = refList.T[8]*np.array([refl[13] for refl in data[G2frame.RefList]]) |
---|
2033 | Imax = np.max(I100) |
---|
2034 | if Imax: |
---|
2035 | I100 *= 100.0/Imax |
---|
2036 | refs = np.vstack((refList.T[:11],I100)).T |
---|
2037 | for i in range(len(refs)): rowLabels.append(str(i)) |
---|
2038 | if HKLF: |
---|
2039 | colLabels = ['H','K','L','mul','d','Fosq','sig','Fcsq','FoTsq','FcTsq','phase',] |
---|
2040 | else: |
---|
2041 | colLabels = ['H','K','L','mul','d','pos','sig','gam','Fosq','Fcsq','phase','I100',] |
---|
2042 | Types = 4*[wg.GRID_VALUE_LONG,]+4*[wg.GRID_VALUE_FLOAT+':10,4',]+ \ |
---|
2043 | 2*[wg.GRID_VALUE_FLOAT+':10,2',]+[wg.GRID_VALUE_FLOAT+':10,3',]+ \ |
---|
2044 | [wg.GRID_VALUE_FLOAT+':10,2',] |
---|
2045 | G2frame.PeakTable = G2gd.Table(refs,rowLabels=rowLabels,colLabels=colLabels,types=Types) |
---|
2046 | G2frame.dataFrame.SetLabel('Reflection List for '+phaseName) |
---|
2047 | G2frame.dataDisplay = G2gd.GSGrid(parent=G2frame.dataFrame) |
---|
2048 | G2frame.dataDisplay.SetTable(G2frame.PeakTable, True) |
---|
2049 | G2frame.dataDisplay.EnableEditing(False) |
---|
2050 | G2frame.dataDisplay.SetMargins(0,0) |
---|
2051 | G2frame.dataDisplay.AutoSizeColumns(False) |
---|
2052 | G2frame.dataDisplay.Fit() |
---|
2053 | size = G2frame.dataDisplay.GetSize() |
---|
2054 | G2frame.dataFrame.setSizePosLeft([size[0]+32,350]) |
---|
2055 | ################################################################################ |
---|
2056 | ##### PDF controls |
---|
2057 | ################################################################################ |
---|
2058 | |
---|
2059 | def UpdatePDFGrid(G2frame,data): |
---|
2060 | '''respond to selection of PWDR PDF data tree item. |
---|
2061 | ''' |
---|
2062 | global inst |
---|
2063 | tth2q = lambda t,w:4.0*math.pi*sind(t/2.0)/w |
---|
2064 | dataFile = G2frame.PatternTree.GetItemText(G2frame.PatternId) |
---|
2065 | powName = 'PWDR'+dataFile[4:] |
---|
2066 | powId = G2gd.GetPatternTreeItemId(G2frame,G2frame.root, powName) |
---|
2067 | fullLimits,limits = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,powId, 'Limits'))[:2] |
---|
2068 | inst = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,powId, 'Instrument Parameters'))[0] |
---|
2069 | if 'Lam' in inst: |
---|
2070 | keV = 12.397639/inst['Lam'][1] |
---|
2071 | else: |
---|
2072 | keV = 12.397639/inst['Lam1'][0] |
---|
2073 | wave = 12.397639/keV |
---|
2074 | qLimits = [tth2q(fullLimits[0],wave),tth2q(fullLimits[1],wave)] |
---|
2075 | data['QScaleLim'][1] = min(qLimits[1],data['QScaleLim'][1]) |
---|
2076 | if data['QScaleLim'][0]: |
---|
2077 | data['QScaleLim'][0] = max(qLimits[0],data['QScaleLim'][0]) |
---|
2078 | else: #initial setting at 90% of max Q |
---|
2079 | data['QScaleLim'][0] = 0.90*data['QScaleLim'][1] |
---|
2080 | polariz = inst['Polariz.'][1] |
---|
2081 | azimuth = inst['Azimuth'][1] |
---|
2082 | itemDict = {} |
---|
2083 | |
---|
2084 | def FillFileSizer(fileSizer,key): |
---|
2085 | #fileSizer is a FlexGridSizer(3,6) |
---|
2086 | |
---|
2087 | def OnSelectFile(event): |
---|
2088 | Obj = event.GetEventObject() |
---|
2089 | fileKey,itemKey,fmt = itemDict[Obj.GetId()] |
---|
2090 | if itemKey == 'Name': |
---|
2091 | value = Obj.GetValue() |
---|
2092 | Obj.SetValue(fmt%(value)) |
---|
2093 | data[fileKey][itemKey] = value |
---|
2094 | UpdatePDFGrid(G2frame,data) |
---|
2095 | |
---|
2096 | def OnValueChange(event): |
---|
2097 | Obj = event.GetEventObject() |
---|
2098 | fileKey,itemKey,fmt = itemDict[Obj.GetId()] |
---|
2099 | try: |
---|
2100 | value = float(Obj.GetValue()) |
---|
2101 | except ValueError: |
---|
2102 | value = -1.0 |
---|
2103 | Obj.SetValue(fmt%(value)) |
---|
2104 | data[fileKey][itemKey] = value |
---|
2105 | auxPlot = ComputePDF(data) |
---|
2106 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2107 | |
---|
2108 | item = data[key] |
---|
2109 | fileList = np.array(GetFileList('PWDR')).T[1] |
---|
2110 | fileSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' '+key+' file:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2111 | fileName = wx.ComboBox(G2frame.dataDisplay,value=item['Name'],choices=fileList, |
---|
2112 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
2113 | itemDict[fileName.GetId()] = [key,'Name','%s'] |
---|
2114 | fileName.Bind(wx.EVT_COMBOBOX,OnSelectFile) |
---|
2115 | fileSizer.Add(fileName,0,) |
---|
2116 | fileSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label='Multiplier:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2117 | mult = wx.TextCtrl(G2frame.dataDisplay,value='%.3f'%(item['Mult']),style=wx.TE_PROCESS_ENTER) |
---|
2118 | itemDict[mult.GetId()] = [key,'Mult','%.3f'] |
---|
2119 | mult.Bind(wx.EVT_TEXT_ENTER,OnValueChange) |
---|
2120 | mult.Bind(wx.EVT_KILL_FOCUS,OnValueChange) |
---|
2121 | fileSizer.Add(mult,0,) |
---|
2122 | fileSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label='Add:'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2123 | add = wx.TextCtrl(G2frame.dataDisplay,value='%.0f'%(item['Add']),style=wx.TE_PROCESS_ENTER) |
---|
2124 | itemDict[add.GetId()] = [key,'Add','%.0f'] |
---|
2125 | add.Bind(wx.EVT_TEXT_ENTER,OnValueChange) |
---|
2126 | add.Bind(wx.EVT_KILL_FOCUS,OnValueChange) |
---|
2127 | fileSizer.Add(add,0,) |
---|
2128 | |
---|
2129 | def SumElementVolumes(): |
---|
2130 | sumVol = 0. |
---|
2131 | ElList = data['ElList'] |
---|
2132 | for El in ElList: |
---|
2133 | Avol = (4.*math.pi/3.)*ElList[El]['Drad']**3 |
---|
2134 | sumVol += Avol*ElList[El]['FormulaNo'] |
---|
2135 | return sumVol |
---|
2136 | auxPlot = ComputePDF(data) |
---|
2137 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2138 | |
---|
2139 | def FillElemSizer(elemSizer,ElData): |
---|
2140 | |
---|
2141 | def OnFractionChange(event): |
---|
2142 | try: |
---|
2143 | value = max(0.0,float(num.GetValue())) |
---|
2144 | except ValueError: |
---|
2145 | value = 0.0 |
---|
2146 | num.SetValue('%.3f'%(value)) |
---|
2147 | ElData['FormulaNo'] = value |
---|
2148 | data['Form Vol'] = max(10.0,SumElementVolumes()) |
---|
2149 | formVol.SetValue('%.2f'%(data['Form Vol'])) |
---|
2150 | wx.CallAfter(UpdatePDFGrid,G2frame,data) |
---|
2151 | auxPlot = ComputePDF(data) |
---|
2152 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2153 | |
---|
2154 | elemSizer.Add(wx.StaticText(parent=G2frame.dataDisplay, |
---|
2155 | label=' Element: '+'%2s'%(ElData['Symbol'])+' * '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2156 | num = wx.TextCtrl(G2frame.dataDisplay,value='%.3f'%(ElData['FormulaNo']),style=wx.TE_PROCESS_ENTER) |
---|
2157 | num.Bind(wx.EVT_TEXT_ENTER,OnFractionChange) |
---|
2158 | num.Bind(wx.EVT_KILL_FOCUS,OnFractionChange) |
---|
2159 | elemSizer.Add(num,0,wx.ALIGN_CENTER_VERTICAL) |
---|
2160 | elemSizer.Add(wx.StaticText(parent=G2frame.dataDisplay, |
---|
2161 | label="f': %.3f"%(ElData['fp'])+' f": %.3f'%(ElData['fpp'])+' mu: %.2f barns'%(ElData['mu']) ), |
---|
2162 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
2163 | |
---|
2164 | def OnGeometry(event): |
---|
2165 | data['Geometry'] = geometry.GetValue() |
---|
2166 | UpdatePDFGrid(G2frame,data) |
---|
2167 | auxPlot = ComputePDF(data) |
---|
2168 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2169 | |
---|
2170 | def OnDetType(event): |
---|
2171 | data['DetType'] = detType.GetValue() |
---|
2172 | UpdatePDFGrid(G2frame,data) |
---|
2173 | auxPlot = ComputePDF(data) |
---|
2174 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2175 | |
---|
2176 | def OnFormVol(event): |
---|
2177 | try: |
---|
2178 | value = float(formVol.GetValue()) |
---|
2179 | if value <= 0.0: |
---|
2180 | raise ValueError |
---|
2181 | except ValueError: |
---|
2182 | value = data['Form Vol'] |
---|
2183 | data['Form Vol'] = value |
---|
2184 | UpdatePDFGrid(G2frame,data) |
---|
2185 | auxPlot = ComputePDF(data) |
---|
2186 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2187 | |
---|
2188 | def OnDiameter(event): |
---|
2189 | try: |
---|
2190 | value = float(diam.GetValue()) |
---|
2191 | if value <= 0.0: |
---|
2192 | raise ValueError |
---|
2193 | except ValueError: |
---|
2194 | value = data['Diam'] |
---|
2195 | data['Diam'] = value |
---|
2196 | UpdatePDFGrid(G2frame,data) |
---|
2197 | auxPlot = ComputePDF(data) |
---|
2198 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2199 | |
---|
2200 | def OnPolaVal(event): |
---|
2201 | try: |
---|
2202 | value = float(polaVal.GetValue()) |
---|
2203 | if not (0.0 <= value <= 1.0): |
---|
2204 | raise ValueError |
---|
2205 | except ValueError: |
---|
2206 | value = inst['Polariz.'][1] |
---|
2207 | inst['Polariz.'][1] = value |
---|
2208 | polaVal.SetValue('%.2f'%(inst['Polariz.'][1])) |
---|
2209 | UpdatePDFGrid(G2frame,data) |
---|
2210 | auxPlot = ComputePDF(data) |
---|
2211 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2212 | |
---|
2213 | def OnAzimVal(event): |
---|
2214 | try: |
---|
2215 | value = float(azimVal.GetValue()) |
---|
2216 | if not (0. <= value <= 360.): |
---|
2217 | raise ValueError |
---|
2218 | except ValueError: |
---|
2219 | value = inst['Azimuth'][1] |
---|
2220 | inst['Azimuth'][1] = value |
---|
2221 | azimVal.SetValue('%.1f'%(inst['Azimuth'][1])) |
---|
2222 | UpdatePDFGrid(G2frame,data) |
---|
2223 | auxPlot = ComputePDF(data) |
---|
2224 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2225 | |
---|
2226 | def OnObliqCoeff(event): |
---|
2227 | try: |
---|
2228 | value = float(obliqCoeff.GetValue()) |
---|
2229 | if value < 0.0: |
---|
2230 | raise ValueError |
---|
2231 | elif value > 1.0: |
---|
2232 | value = 1.0 |
---|
2233 | except ValueError: |
---|
2234 | value = data['ObliqCoeff'] |
---|
2235 | data['ObliqCoeff'] = value |
---|
2236 | obliqCoeff.SetValue('%.3f'%(value)) |
---|
2237 | auxPlot = ComputePDF(data) |
---|
2238 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2239 | |
---|
2240 | def OnRulandWdt(event): |
---|
2241 | try: |
---|
2242 | value = float(rulandWdt.GetValue()) |
---|
2243 | if value <= 0.001: |
---|
2244 | raise ValueError |
---|
2245 | elif value > 1.0: |
---|
2246 | value = 1.0 |
---|
2247 | except ValueError: |
---|
2248 | value = data['Ruland'] |
---|
2249 | data['Ruland'] = value |
---|
2250 | rulandWdt.SetValue('%.3f'%(value)) |
---|
2251 | auxPlot = ComputePDF(data) |
---|
2252 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2253 | |
---|
2254 | def OnRulSlider(event): |
---|
2255 | value = int(rulandSldr.GetValue())/1000. |
---|
2256 | data['Ruland'] = max(0.001,value) |
---|
2257 | rulandWdt.SetValue('%.3f'%(data['Ruland'])) |
---|
2258 | auxPlot = ComputePDF(data) |
---|
2259 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2260 | |
---|
2261 | def OnLorch(event): |
---|
2262 | data['Lorch'] = lorch.GetValue() |
---|
2263 | auxPlot = ComputePDF(data) |
---|
2264 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2265 | |
---|
2266 | def OnPacking(event): |
---|
2267 | try: |
---|
2268 | value = float(pack.GetValue()) |
---|
2269 | if value <= 0.0: |
---|
2270 | raise ValueError |
---|
2271 | except ValueError: |
---|
2272 | value = data['Pack'] |
---|
2273 | data['Pack'] = value |
---|
2274 | UpdatePDFGrid(G2frame,data) |
---|
2275 | auxPlot = ComputePDF(data) |
---|
2276 | G2plt.PlotISFG(G2frame,newPlot=False) |
---|
2277 | |
---|
2278 | def OnSQmin(event): |
---|
2279 | try: |
---|
2280 | value = float(SQmin.GetValue()) |
---|
2281 | if value < qLimits[0]: |
---|
2282 | raise ValueError |
---|
2283 | except ValueError: |
---|
2284 | value = max(qLimits[0],data['QScaleLim'][0]) |
---|
2285 | data['QScaleLim'][0] = value |
---|
2286 | SQmin.SetValue('%.1f'%(value)) |
---|
2287 | auxPlot = ComputePDF(data) |
---|
2288 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2289 | |
---|
2290 | def OnSQmax(event): |
---|
2291 | try: |
---|
2292 | value = float(SQmax.GetValue()) |
---|
2293 | if value > qLimits[1]: |
---|
2294 | raise ValueError |
---|
2295 | except ValueError: |
---|
2296 | value = min(qLimits[1],data['QScaleLim'][1]) |
---|
2297 | data['QScaleLim'][1] = value |
---|
2298 | if value < data['QScaleLim'][0]: |
---|
2299 | data['QScaleLim'][0] = 0.90*value |
---|
2300 | SQmin.SetValue('%.1f'%(data['QScaleLim'][0])) |
---|
2301 | SQmax.SetValue('%.1f'%(value)) |
---|
2302 | auxPlot = ComputePDF(data) |
---|
2303 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2304 | |
---|
2305 | def OnResetQ(event): |
---|
2306 | resetQ.SetValue(False) |
---|
2307 | data['QScaleLim'][1] = qLimits[1] |
---|
2308 | SQmax.SetValue('%.1f'%(data['QScaleLim'][1])) |
---|
2309 | data['QScaleLim'][0] = 0.9*qLimits[1] |
---|
2310 | SQmin.SetValue('%.1f'%(data['QScaleLim'][0])) |
---|
2311 | auxPlot = ComputePDF(data) |
---|
2312 | G2plt.PlotISFG(G2frame,newPlot=True) |
---|
2313 | |
---|
2314 | def GetFileList(fileType,skip=None): |
---|
2315 | fileList = [[False,'',0]] |
---|
2316 | Source = '' |
---|
2317 | id, cookie = G2frame.PatternTree.GetFirstChild(G2frame.root) |
---|
2318 | while id: |
---|
2319 | name = G2frame.PatternTree.GetItemText(id) |
---|
2320 | if fileType in name: |
---|
2321 | if id == skip: |
---|
2322 | Source = name |
---|
2323 | else: |
---|
2324 | fileList.append([False,name,id]) |
---|
2325 | id, cookie = G2frame.PatternTree.GetNextChild(G2frame.root, cookie) |
---|
2326 | if skip: |
---|
2327 | return fileList,Source |
---|
2328 | else: |
---|
2329 | return fileList |
---|
2330 | |
---|
2331 | def OnCopyPDFControls(event): |
---|
2332 | import copy |
---|
2333 | TextList,Source = GetFileList('PDF',skip=G2frame.PatternId) |
---|
2334 | TextList[0] = [False,'All PDF',0] |
---|
2335 | if len(TextList) == 1: |
---|
2336 | G2frame.ErrorDialog('Nothing to copy controls to','There must be more than one "PDF" pattern') |
---|
2337 | return |
---|
2338 | dlg = G2frame.CopyDialog(G2frame,'Copy PDF controls','Copy controls from '+Source+' to:',TextList) |
---|
2339 | try: |
---|
2340 | if dlg.ShowModal() == wx.ID_OK: |
---|
2341 | result = dlg.GetData() |
---|
2342 | if result[0][0]: |
---|
2343 | result = TextList[1:] |
---|
2344 | for item in result: item[0] = True |
---|
2345 | for i,item in enumerate(result): |
---|
2346 | ifcopy,name,id = item |
---|
2347 | if ifcopy: |
---|
2348 | olddata = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,id, 'PDF Controls')) |
---|
2349 | sample = olddata['Sample'] |
---|
2350 | olddata.update(copy.deepcopy(data)) |
---|
2351 | olddata['Sample'] = sample |
---|
2352 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,id, 'PDF Controls'),olddata) |
---|
2353 | Status.SetStatusText('PDF controls copied') |
---|
2354 | finally: |
---|
2355 | dlg.Destroy() |
---|
2356 | |
---|
2357 | def OnSavePDFControls(event): |
---|
2358 | print 'save PDF controls?' |
---|
2359 | |
---|
2360 | def OnLoadPDFControls(event): |
---|
2361 | print 'Load PDF controls?' |
---|
2362 | |
---|
2363 | def OnAddElement(event): |
---|
2364 | ElList = data['ElList'] |
---|
2365 | PE = G2elemGUI.PickElement(G2frame,oneOnly=True) |
---|
2366 | if PE.ShowModal() == wx.ID_OK: |
---|
2367 | El = PE.Elem |
---|
2368 | if El not in ElList and El != 'None': |
---|
2369 | ElemSym = El.strip().upper() |
---|
2370 | FpMu = G2elem.FPcalc(G2elem.GetXsectionCoeff(ElemSym), keV) |
---|
2371 | ElData = G2elem.GetFormFactorCoeff(ElemSym)[0] |
---|
2372 | ElData['FormulaNo'] = 0.0 |
---|
2373 | ElData.update(G2elem.GetAtomInfo(ElemSym)) |
---|
2374 | ElData.update(dict(zip(['fp','fpp','mu'],FpMu))) |
---|
2375 | ElData.update(G2elem.GetFFC5(El)) |
---|
2376 | data['ElList'][El] = ElData |
---|
2377 | data['Form Vol'] = max(10.0,SumElementVolumes()) |
---|
2378 | PE.Destroy() |
---|
2379 | UpdatePDFGrid(G2frame,data) |
---|
2380 | |
---|
2381 | def OnDeleteElement(event): |
---|
2382 | ElList = data['ElList'] |
---|
2383 | choice = ElList.keys() |
---|
2384 | dlg = G2elemGUI.DeleteElement(G2frame,choice=choice) |
---|
2385 | if dlg.ShowModal() == wx.ID_OK: |
---|
2386 | del ElList[dlg.GetDeleteElement()] |
---|
2387 | dlg.Destroy() |
---|
2388 | UpdatePDFGrid(G2frame,data) |
---|
2389 | |
---|
2390 | def ComputePDF(Data): |
---|
2391 | xydata = {} |
---|
2392 | for key in ['Sample','Sample Bkg.','Container','Container Bkg.']: |
---|
2393 | name = Data[key]['Name'] |
---|
2394 | if name: |
---|
2395 | xydata[key] = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,G2frame.root,name)) |
---|
2396 | PDFname = name |
---|
2397 | powName = xydata['Sample'][2] |
---|
2398 | powId = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,powName) |
---|
2399 | inst = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,powId,'Instrument Parameters'))[0] |
---|
2400 | auxPlot = G2pwd.CalcPDF(Data,inst,xydata) |
---|
2401 | PDFId = G2gd.GetPatternTreeItemId(G2frame,G2frame.root,'PDF '+powName[4:]) |
---|
2402 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PDFId,'I(Q)'+powName[4:]),xydata['IofQ']) |
---|
2403 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PDFId,'S(Q)'+powName[4:]),xydata['SofQ']) |
---|
2404 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PDFId,'F(Q)'+powName[4:]),xydata['FofQ']) |
---|
2405 | G2frame.PatternTree.SetItemPyData(G2gd.GetPatternTreeItemId(G2frame,PDFId,'G(R)'+powName[4:]),xydata['GofR']) |
---|
2406 | return auxPlot |
---|
2407 | |
---|
2408 | def OnComputePDF(event): |
---|
2409 | print 'Calculating PDF:' |
---|
2410 | auxPlot = ComputePDF(data) |
---|
2411 | print 'Done calculating PDF:' |
---|
2412 | Status.SetStatusText('PDF computed') |
---|
2413 | for plot in auxPlot: |
---|
2414 | G2plt.PlotXY(G2frame,plot[:2],type=plot[2]) |
---|
2415 | |
---|
2416 | G2plt.PlotISFG(G2frame,newPlot=True,type='I(Q)') |
---|
2417 | G2plt.PlotISFG(G2frame,newPlot=True,type='S(Q)') |
---|
2418 | G2plt.PlotISFG(G2frame,newPlot=True,type='F(Q)') |
---|
2419 | G2plt.PlotISFG(G2frame,newPlot=True,type='G(R)') |
---|
2420 | |
---|
2421 | def OnComputeAllPDF(event): |
---|
2422 | print 'Calculating PDFs:' |
---|
2423 | if G2frame.PatternTree.GetCount(): |
---|
2424 | id, cookie = G2frame.PatternTree.GetFirstChild(G2frame.root) |
---|
2425 | while id: |
---|
2426 | Name = G2frame.PatternTree.GetItemText(id) |
---|
2427 | if 'PDF' in Name: |
---|
2428 | Data = G2frame.PatternTree.GetItemPyData(G2gd.GetPatternTreeItemId(G2frame,id,'PDF Controls')) |
---|
2429 | auxPlot = ComputePDF(Data) |
---|
2430 | id, cookie = G2frame.PatternTree.GetNextChild(G2frame.root, cookie) |
---|
2431 | Status.SetStatusText('All PDFs computed') |
---|
2432 | G2plt.PlotISFG(G2frame,newPlot=True,type='G(R)') |
---|
2433 | print ' Done calculating PDFs:' |
---|
2434 | |
---|
2435 | def OnShowTip(G2frame,tip): |
---|
2436 | print tip |
---|
2437 | |
---|
2438 | if G2frame.dataDisplay: |
---|
2439 | G2frame.dataFrame.Clear() |
---|
2440 | G2gd.SetDataMenuBar(G2frame,G2frame.dataFrame.PDFMenu) |
---|
2441 | if not G2frame.dataFrame.GetStatusBar(): |
---|
2442 | Status = G2frame.dataFrame.CreateStatusBar() |
---|
2443 | G2frame.dataDisplay = wx.Panel(G2frame.dataFrame) |
---|
2444 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnCopyPDFControls, id=G2gd.wxID_PDFCOPYCONTROLS) |
---|
2445 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnSavePDFControls, id=G2gd.wxID_PDFSAVECONTROLS) |
---|
2446 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnLoadPDFControls, id=G2gd.wxID_PDFLOADCONTROLS) |
---|
2447 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnAddElement, id=G2gd.wxID_PDFADDELEMENT) |
---|
2448 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnDeleteElement, id=G2gd.wxID_PDFDELELEMENT) |
---|
2449 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnComputePDF, id=G2gd.wxID_PDFCOMPUTE) |
---|
2450 | G2frame.dataFrame.Bind(wx.EVT_MENU, OnComputeAllPDF, id=G2gd.wxID_PDFCOMPUTEALL) |
---|
2451 | mainSizer = wx.BoxSizer(wx.VERTICAL) |
---|
2452 | mainSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' PDF data files: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2453 | mainSizer.Add((5,5),0) |
---|
2454 | str = ' Sample file: PWDR %s Wavelength, A: %.5f Energy, keV: %.3f Polariz.: %.2f '%(dataFile[3:],wave,keV,polariz) |
---|
2455 | mainSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=str),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2456 | # dataSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
2457 | # dataSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label='Azimuth'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2458 | # azimVal = wx.TextCtrl(G2frame.dataDisplay,value='%.2f'%(inst['Azimuth'])) |
---|
2459 | # azimVal.Bind(wx.EVT_TEXT_ENTER,OnAzimVal) |
---|
2460 | # azimVal.Bind(wx.EVT_KILL_FOCUS,OnAzimVal) |
---|
2461 | # dataSizer.Add(azimVal,0) |
---|
2462 | # dataSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label='Polarization'),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2463 | # polaVal = wx.TextCtrl(G2frame.dataDisplay,value='%.2f'%(inst['Polariz.'])) |
---|
2464 | # polaVal.Bind(wx.EVT_TEXT_ENTER,OnPolaVal) |
---|
2465 | # polaVal.Bind(wx.EVT_KILL_FOCUS,OnPolaVal) |
---|
2466 | # dataSizer.Add(polaVal,0) |
---|
2467 | # mainSizer.Add(dataSizer,0) |
---|
2468 | mainSizer.Add((5,5),0) |
---|
2469 | fileSizer = wx.FlexGridSizer(3,6,5,1) |
---|
2470 | select = ['Sample Bkg.','Container'] |
---|
2471 | if data['Container']['Name']: |
---|
2472 | select.append('Container Bkg.') |
---|
2473 | for key in select: |
---|
2474 | FillFileSizer(fileSizer,key) |
---|
2475 | mainSizer.Add(fileSizer,0) |
---|
2476 | mainSizer.Add((5,5),0) |
---|
2477 | mainSizer.Add(wx.StaticText(G2frame.dataDisplay,label=' Sample information: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2478 | mainSizer.Add((5,5),0) |
---|
2479 | |
---|
2480 | ElList = data['ElList'] |
---|
2481 | Abs = G2lat.CellAbsorption(ElList,data['Form Vol']) |
---|
2482 | Trans = G2pwd.Transmission(data['Geometry'],Abs*data['Pack'],data['Diam']) |
---|
2483 | elemSizer = wx.FlexGridSizer(3,3,5,1) |
---|
2484 | for El in ElList: |
---|
2485 | FillElemSizer(elemSizer,ElList[El]) |
---|
2486 | mainSizer.Add(elemSizer,0) |
---|
2487 | mainSizer.Add((5,5),0) |
---|
2488 | midSizer = wx.BoxSizer(wx.HORIZONTAL) |
---|
2489 | midSizer.Add(wx.StaticText(G2frame.dataDisplay,label=' Formula volume: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2490 | formVol = wx.TextCtrl(G2frame.dataDisplay,value='%.2f'%(data['Form Vol'])) |
---|
2491 | formVol.Bind(wx.EVT_TEXT_ENTER,OnFormVol) |
---|
2492 | formVol.Bind(wx.EVT_KILL_FOCUS,OnFormVol) |
---|
2493 | midSizer.Add(formVol,0) |
---|
2494 | midSizer.Add(wx.StaticText(G2frame.dataDisplay, |
---|
2495 | label=' Theoretical absorption: %.4f cm-1 Sample absorption: %.4f cm-1'%(Abs,Abs*data['Pack'])), |
---|
2496 | 0,wx.ALIGN_CENTER_VERTICAL) |
---|
2497 | mainSizer.Add(midSizer,0) |
---|
2498 | mainSizer.Add((5,5),0) |
---|
2499 | |
---|
2500 | geoBox = wx.BoxSizer(wx.HORIZONTAL) |
---|
2501 | geoBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Sample geometry: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2502 | choice = ['Cylinder','Bragg-Brentano','Tilting flat plate in transmission','Fixed flat plate'] |
---|
2503 | geometry = wx.ComboBox(G2frame.dataDisplay,value=data['Geometry'],choices=choice, |
---|
2504 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
2505 | geometry.Bind(wx.EVT_COMBOBOX, OnGeometry) |
---|
2506 | geoBox.Add(geometry,0) |
---|
2507 | geoBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Sample diameter/thickness, mm: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2508 | diam = wx.TextCtrl(G2frame.dataDisplay,value='%.3f'%(data['Diam'])) |
---|
2509 | diam.Bind(wx.EVT_TEXT_ENTER,OnDiameter) |
---|
2510 | diam.Bind(wx.EVT_KILL_FOCUS,OnDiameter) |
---|
2511 | # diam.Bind(wx.EVT_SET_FOCUS,OnShowTip(G2frame,'tip')) #this doesn't work - what would???? |
---|
2512 | geoBox.Add(diam,0) |
---|
2513 | mainSizer.Add(geoBox,0) |
---|
2514 | mainSizer.Add((5,5),0) |
---|
2515 | geoBox = wx.BoxSizer(wx.HORIZONTAL) |
---|
2516 | geoBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Packing: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2517 | pack = wx.TextCtrl(G2frame.dataDisplay,value='%.2f'%(data['Pack'])) |
---|
2518 | pack.Bind(wx.EVT_TEXT_ENTER,OnPacking) |
---|
2519 | pack.Bind(wx.EVT_KILL_FOCUS,OnPacking) |
---|
2520 | geoBox.Add(pack,0) |
---|
2521 | geoBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Sample transmission: %.3f %%'%(Trans)),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2522 | mainSizer.Add(geoBox,0) |
---|
2523 | mainSizer.Add((5,5),0) |
---|
2524 | |
---|
2525 | mainSizer.Add(wx.StaticText(parent=G2frame.dataDisplay,label=' S(Q)->F(Q)->G(R) controls: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2526 | mainSizer.Add((5,5),0) |
---|
2527 | sqBox = wx.BoxSizer(wx.HORIZONTAL) |
---|
2528 | sqBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Detector type: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2529 | choice = ['Image plate','Point detector'] |
---|
2530 | detType = wx.ComboBox(G2frame.dataDisplay,value=data['DetType'],choices=choice, |
---|
2531 | style=wx.CB_READONLY|wx.CB_DROPDOWN) |
---|
2532 | detType.Bind(wx.EVT_COMBOBOX, OnDetType) |
---|
2533 | sqBox.Add(detType,0) |
---|
2534 | if data['DetType'] == 'Image plate': |
---|
2535 | sqBox.Add(wx.StaticText(G2frame.dataDisplay,label=' IP transmission coeff.: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2536 | obliqCoeff = wx.TextCtrl(G2frame.dataDisplay,value='%.3f'%(data['ObliqCoeff'])) |
---|
2537 | obliqCoeff.Bind(wx.EVT_TEXT_ENTER,OnObliqCoeff) |
---|
2538 | obliqCoeff.Bind(wx.EVT_KILL_FOCUS,OnObliqCoeff) |
---|
2539 | sqBox.Add(obliqCoeff,0) |
---|
2540 | mainSizer.Add(sqBox,0) |
---|
2541 | |
---|
2542 | sqBox = wx.BoxSizer(wx.HORIZONTAL) |
---|
2543 | sqBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Ruland width: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2544 | rulandSldr = wx.Slider(parent=G2frame.dataDisplay,style=wx.SL_HORIZONTAL, |
---|
2545 | value=int(1000*data['Ruland'])) |
---|
2546 | sqBox.Add(rulandSldr,1,wx.EXPAND) |
---|
2547 | rulandSldr.Bind(wx.EVT_SLIDER, OnRulSlider) |
---|
2548 | rulandWdt = wx.TextCtrl(G2frame.dataDisplay,value='%.3f'%(data['Ruland'])) |
---|
2549 | rulandWdt.Bind(wx.EVT_TEXT_ENTER,OnRulandWdt) |
---|
2550 | rulandWdt.Bind(wx.EVT_KILL_FOCUS,OnRulandWdt) |
---|
2551 | sqBox.Add(rulandWdt,0,wx.ALIGN_CENTER_VERTICAL) |
---|
2552 | mainSizer.Add(sqBox,0,wx.ALIGN_LEFT|wx.EXPAND) |
---|
2553 | |
---|
2554 | sqBox = wx.BoxSizer(wx.HORIZONTAL) |
---|
2555 | lorch = wx.CheckBox(parent=G2frame.dataDisplay,label='Lorch damping?') |
---|
2556 | lorch.SetValue(data['Lorch']) |
---|
2557 | lorch.Bind(wx.EVT_CHECKBOX, OnLorch) |
---|
2558 | sqBox.Add(lorch,0,wx.ALIGN_CENTER_VERTICAL) |
---|
2559 | sqBox.Add(wx.StaticText(G2frame.dataDisplay,label=' Scaling q-range: '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2560 | SQmin = wx.TextCtrl(G2frame.dataDisplay,value='%.1f'%(data['QScaleLim'][0])) |
---|
2561 | SQmin.Bind(wx.EVT_TEXT_ENTER,OnSQmin) |
---|
2562 | SQmin.Bind(wx.EVT_KILL_FOCUS,OnSQmin) |
---|
2563 | sqBox.Add(SQmin,0) |
---|
2564 | sqBox.Add(wx.StaticText(G2frame.dataDisplay,label=' to '),0,wx.ALIGN_CENTER_VERTICAL) |
---|
2565 | SQmax = wx.TextCtrl(G2frame.dataDisplay,value='%.1f'%(data['QScaleLim'][1])) |
---|
2566 | SQmax.Bind(wx.EVT_TEXT_ENTER,OnSQmax) |
---|
2567 | SQmax.Bind(wx.EVT_KILL_FOCUS,OnSQmax) |
---|
2568 | sqBox.Add(SQmax,0) |
---|
2569 | resetQ = wx.CheckBox(parent=G2frame.dataDisplay,label='Reset?') |
---|
2570 | sqBox.Add(resetQ,0) |
---|
2571 | resetQ.Bind(wx.EVT_CHECKBOX, OnResetQ) |
---|
2572 | |
---|
2573 | mainSizer.Add(sqBox,0) |
---|
2574 | |
---|
2575 | mainSizer.Layout() |
---|
2576 | G2frame.dataDisplay.SetSizer(mainSizer) |
---|
2577 | Size = mainSizer.Fit(G2frame.dataFrame) |
---|
2578 | G2frame.dataDisplay.SetSize(Size) |
---|
2579 | G2frame.dataFrame.setSizePosLeft(Size) |
---|
2580 | |
---|