source: trunk/doc/expgui2.html @ 259

Last change on this file since 259 was 259, checked in by toby, 12 years ago

# on 2000/08/04 19:25:35, toby did:
document atom xform/global set

  • Property rcs:author set to toby
  • Property rcs:date set to 2000/08/04 19:25:35
  • Property rcs:lines set to +12 -2
  • Property rcs:rev set to 1.3
  • Property rcs:state set to Exp
  • Property svn:keywords set to Author Date Revision Id
File size: 2.6 KB
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[219]1<html>
2<head>
3   <META NAME="Author" CONTENT="Brian H. Toby">
4   <title>EXPGUI</title>
5</head>
6<BODY BGCOLOR="#FFFFFF">
7
8<A HREF=http://www.ncnr.nist.gov>
9<IMG SRC="http://www.ncnr.nist.gov/images/ncnrtrans.gif" 
10alt="Link to NIST Center for Neutron Research home page"
11ALIGN=RIGHT></A>
12<A HREF=http://www.nist.gov>
13<IMG SRC="http://www.ncnr.nist.gov/images/webidblue_2lineright.gif" 
14alt="Link to National Institute of Standards & Technology home page"
15ALIGN=LEFT></A>
16<CENTER>
17<A Href="http://www.ncnr.nist.gov/programs/crystallography/software/tclpkgs.html">
18<IMG SRC="tcltklogo100.gif" 
19alt="Link to Tcl/Tk information">
20</CENTER></A>
21<hr>
22
23<center><h1>
24EXPGUI
25</h1></center>
26<A Href="expgui.html">EXPGUI top</A>
27
28<h3>A.2 Phase Pane</h3> 
29<DL><DL>
30The phase pane is used to edit information
31about the structural model(s) found in the experiment
32file. The flags for refining the unit cell and atomic parameters,
33as well as ther damping values,
34can be set  on this pane. Note that if a
35single atom is selected using the mouse, the information
36for that atom can be edited. If a group of atoms is
37selected
38<A href="expgui.html#mouseactions">(see Mouse Actions)</A>
39the damping and refinement flags
40for all the selected atoms are changed.
41<P>
42If the EXPTOOL program
43<A href="expgui.html#installation">(see the installation instructions)</A>
44is installed, buttons for adding phases and atoms will
45appear on this pane, as seen below. If the
46program is not properly installed, no errors occur, but the buttons
47do not appear.
48<P>
49Note that the order that atoms appear in this pane is
50determined by the
[245]51<a href="expguic.html#sortatoms">"Sort Atoms by"</a> option
52in the Options Menu. The parameter used for sorting is designated
53with a "*" on the title line above the atoms.
54Clicking on this title line rotates through the sorting modes.
[219]55</DL></DL>
56<img SRC="2.gif" align=TEXTTOP>
[259]57<P>
58<img SRC="2a.gif" align=LEFT>
59If one or more atoms have been selected
60<A href="expgui.html#mouseactions">(see Mouse Actions)</A>, it is possible
61to transform the atom coordinates, globally set occupancy or Uiso (Uequiv)
62values for the selected atoms, or erase the selected atoms, by pressing the
63"Xform atom(s)" button. It is also possible to transform the selected atoms
64from isotropic to anisotropic, or the reverse.
65Note that no changes are actually made, until the
66"Transform Coordinates", "Set Occupancies",... buttons are pressed.
[219]67
[259]68<br clear=all>
[219]69<hr>
70<A Href="expgui.html">EXPGUI top</A>
71
72<p><a href="http://www.ncnr.nist.gov/staff/toby/">Brian Toby</a> (<a href="mailto:brian.toby@nist.gov">Brian.Toby@NIST.GOV</a>)
73<br>
74$Revision: 259 $ $Date: 2009-12-04 23:03:04 +0000 (Fri, 04 Dec 2009) $
75</body>
76</html>
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