1 | # $Id: gsasmenu.tcl 1021 2010-10-12 17:46:50Z chlake $ |
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2 | # $Revision: 1021 $ $Date: 2010-10-12 17:46:50 +0000 (Tue, 12 Oct 2010) $ |
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3 | # menu information for GSAS programs |
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4 | |
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5 | # menu items to be created (N.B. File, Options & Help already exist) |
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6 | set expgui(menunames) {Powder Xtal Graphs Results Calc Macro Import/Export} |
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7 | |
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8 | # contents of each menu |
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9 | array set expgui_menulist { |
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10 | file { |
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11 | EraseHistory |
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12 | convert |
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13 | dlst |
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14 | } |
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15 | option { |
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16 | {liveplot_options} |
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17 | } |
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18 | powder { |
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19 | expedt |
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20 | powpref |
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21 | genles |
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22 | powplot |
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23 | rawplot |
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24 | fitspec |
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25 | bkgedit |
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26 | excledt |
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27 | instedit |
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28 | seqgsas |
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29 | mustrplot |
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30 | } |
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31 | xtal { |
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32 | expedt |
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33 | genles |
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34 | cad4rd |
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35 | p3r3data |
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36 | sxtldata |
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37 | scabs |
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38 | scmerge |
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39 | } |
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40 | graphs { |
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41 | forplot |
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42 | polfplot |
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43 | powplot |
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44 | ortep |
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45 | rawplot |
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46 | fourier |
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47 | forsrh |
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48 | gsas2map |
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49 | liveplot |
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50 | vrstplot |
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51 | widplt |
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52 | absplt |
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53 | seqplot |
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54 | mustrplot |
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55 | } |
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56 | calc { |
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57 | cllchg |
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58 | composition |
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59 | fprime |
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60 | hklgen |
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61 | rducll |
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62 | spcgroup |
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63 | seqgsas |
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64 | seqplot |
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65 | unimol |
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66 | } |
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67 | import/export { |
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68 | hklsort |
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69 | pubtable |
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70 | convert |
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71 | cad4rd |
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72 | dbwscnv |
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73 | x17bcnv |
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74 | p3r3data |
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75 | sxtldata |
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76 | gsas2pdb |
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77 | ref2asc |
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78 | ref2bin |
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79 | gsas2map |
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80 | } |
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81 | results { |
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82 | bijcalc |
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83 | disagl |
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84 | disaglviewer |
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85 | reflist |
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86 | geometry |
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87 | hstdmp |
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88 | istats |
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89 | rcalc |
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90 | composition |
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91 | lstview |
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92 | ramafit |
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93 | seqplot |
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94 | } |
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95 | } |
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96 | |
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97 | array set expgui_cmdlist { |
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98 | |
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99 | Save {- { |
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100 | Saves modifications to the current experiment file to disk} |
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101 | } |
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102 | |
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103 | {Save As} {- { |
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104 | Saves modifications to the current experiment file to disk |
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105 | under a new file name } |
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106 | } |
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107 | |
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108 | {Reread .EXP file} {- { |
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109 | Reread the last saved version of the experiment file from disk. |
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110 | |
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111 | This causes any unsaved changes to be lost.} |
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112 | } |
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113 | |
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114 | {Sort atoms by} {- { |
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115 | Determines the order that atoms are displayed on the "Phase" page |
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116 | Atoms may be displayed sorted by atom number, atom type, |
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117 | or by x, y or z} |
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118 | } |
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119 | |
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120 | {Sort histograms by} {- { |
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121 | Determines the order that histograms are displayed on the |
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122 | Histogram, Scaling and Profile pages |
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123 | |
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124 | Histograms may be sorted by histogram number, histogram type, |
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125 | original bank number, or diffraction angle/wavelength} |
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126 | } |
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127 | |
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128 | {Multiple hist. selection} {- { |
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129 | When this mode is off, it is possible to modify parameters |
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130 | and refinement flags for only a single histogram. For other settings, |
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131 | it is possible to modify parameters and flags for groups of |
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132 | histograms (see help for Mouse actions). |
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133 | |
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134 | It does not make sense, however, to globally modify |
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135 | instrument-related parameters and flags for histograms of different |
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136 | types (e.g. TOF, CW Neutron,...). So if all histogram types can |
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137 | be selected, the Histogram and Profile pages are disabled. If the |
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138 | multiple histogram selection is set to TOF, CW Neutron,... |
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139 | it is possible to modify Histogram and Profile parameters for |
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140 | groups of similar type histograms. |
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141 | |
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142 | Note that profile terms may also be grouped together when more than |
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143 | one phase has the same profile function, or may not be grouped |
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144 | together, depending on the "Group Phases Together" option.} |
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145 | } |
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146 | |
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147 | {Mouse actions} {- { |
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148 | A range of atoms or (in multiple selection mode) histograms may be |
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149 | selected by dragging (holding down) the left mouse button. It is also |
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150 | possible to select a range by using the Shift key with the |
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151 | left mouse button. To select or deselect individual entries, use the |
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152 | Control key with the left mouse button. The right mouse button selects |
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153 | all entries.} |
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154 | } |
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155 | |
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156 | expnam {readnewexp { |
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157 | Select an existing or new GSAS experiment to be used} |
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158 | } |
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159 | |
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160 | {archive EXP} {- { |
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161 | Toggles archiving of .EXP files. When on, files are |
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162 | saved prior to each save or run of expedt in a file named |
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163 | |
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164 | <expnam>.Oxx where xx = 01, 02... FF} |
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165 | } |
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166 | |
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167 | showhelp {showhelp { |
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168 | Show the help information for commands and actions} |
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169 | } |
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170 | |
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171 | powpref {{runGSASwEXP $cmd} { |
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172 | Powder data preparation} |
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173 | {-underline 0} |
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174 | } |
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175 | |
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176 | bijcalc {{runGSASwEXP $cmd} { |
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177 | Thermal parameter analysis} |
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178 | } |
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179 | |
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180 | powplot {{runGSASwEXP $cmd 1} { |
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181 | Display powder patterns} |
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182 | } |
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183 | |
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184 | cllchg {{runGSASwEXP $cmd} { |
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185 | Transform unit cell} |
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186 | } |
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187 | |
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188 | expedt {{runGSASwEXP $cmd} { |
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189 | Run GSAS experiment editor} |
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190 | {-underline 0} |
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191 | } |
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192 | |
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193 | genles {{runGSASwEXP $cmd} { |
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194 | Run General Least Squares program} |
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195 | {-underline 0} |
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196 | } |
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197 | |
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198 | disagl {rundisagl { |
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199 | Distance/angle calculations} |
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200 | } |
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201 | |
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202 | disaglviewer {Geo_Viewer { |
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203 | Show distances and angles in a nice format} |
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204 | } |
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205 | |
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206 | forplot {{runGSASwEXP $cmd} { |
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207 | Display Fourier maps (set Fourier options in EXPEDT |
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208 | and then compute with FOURIER)} |
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209 | } |
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210 | |
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211 | hstdmp {{runGSASwEXP $cmd} { |
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212 | List powder histogram data} |
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213 | } |
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214 | |
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215 | cad4rd {{runGSASwEXP $cmd} { |
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216 | Prepare CAD4 single crystal data} |
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217 | } |
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218 | |
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219 | fourier {{runGSASwEXP $cmd} { |
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220 | Generate Fourier map} |
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221 | } |
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222 | |
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223 | gsas2map {{runGSASwEXP $cmd} { |
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224 | Export GSAS Fourier maps in other formats} |
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225 | } |
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226 | |
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227 | geometry {{runGSASwEXP $cmd} { |
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228 | Molecular geometry calculations} |
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229 | } |
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230 | |
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231 | ortep {{runGSASwEXP $cmd} { |
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232 | Draw crystal structure} |
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233 | } |
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234 | |
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235 | rawplot {{runGSASprog $cmd} { |
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236 | Plot powder data} |
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237 | } |
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238 | |
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239 | |
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240 | p3r3data {{runGSASwEXP $cmd} { |
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241 | Prepare Siemens/Brucker P3R3 single crystal data} |
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242 | } |
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243 | |
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244 | forsrh {{runGSASwEXP $cmd} { |
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245 | Search Fourier map for peaks} |
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246 | } |
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247 | |
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248 | hklsort {{runGSASwEXP $cmd} { |
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249 | Prepare HKL tables} |
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250 | } |
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251 | |
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252 | polfplot {{runGSASwEXP $cmd} { |
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253 | Display polefigures} |
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254 | } |
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255 | |
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256 | rducll {{runGSASprog $cmd} { |
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257 | Unit cell reduction} |
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258 | } |
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259 | |
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260 | sxtldata {{runGSASwEXP $cmd} { |
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261 | Prepare generic single crystal data} |
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262 | } |
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263 | |
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264 | scabs {{runGSASwEXP $cmd} { |
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265 | Single crystal absorption} |
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266 | } |
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267 | |
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268 | istats {{runGSASwEXP $cmd} { |
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269 | HKL Intensity statistics} |
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270 | } |
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271 | |
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272 | reflist {{runGSASwEXP $cmd} { |
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273 | List reflection data} |
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274 | } |
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275 | |
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276 | scmerge {{runGSASwEXP $cmd} { |
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277 | Sort and merge single crystal data} |
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278 | } |
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279 | |
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280 | pubtable {{runGSASwEXP $cmd} { |
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281 | Prepare atom parameter tables} |
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282 | } |
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283 | |
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284 | spcgroup {{runGSASprog $cmd} { |
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285 | Space group symbol interpreter} |
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286 | } |
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287 | |
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288 | rcalc {{runGSASwEXP $cmd} { |
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289 | Compute reflection resuduals} |
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290 | } |
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291 | |
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292 | unimol {{runGSASwEXP $cmd} { |
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293 | Unique molecule assembler} |
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294 | } |
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295 | |
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296 | gsas2cif {{runGSASwEXP $cmd} { |
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297 | Prepare IUCr crystallographic information (CIF) file} |
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298 | } |
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299 | |
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300 | vrstplot {{runGSASwEXP $cmd} { |
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301 | Create a "virtual reality" (.wrl) plot file} |
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302 | } |
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303 | |
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304 | fitspec {{runGSASprog $cmd} { |
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305 | Fit a TOF vanadium scattering spectrum} |
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306 | } |
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307 | |
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308 | fprime {{runGSASprog $cmd} { |
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309 | Compute f, f', f'' and mu/rho for an element for a range of x-ray wavelengths} |
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310 | } |
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311 | |
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312 | dbwscnv {{runGSASprog $cmd} { |
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313 | Convert a powder diffraction data file from DBWS format} |
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314 | } |
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315 | |
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316 | x17bcnv {{runGSASprog $cmd} { |
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317 | Convert an energy dispersive diffractogram data file from NSLS X17b} |
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318 | } |
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319 | gsas2pdb {{runGSASprog $cmd} { |
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320 | Import (using GSAS2PDB & EXPEDT) and export coordinates (for |
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321 | macromolecular phases) to/from Protein Data Base files.} |
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322 | } |
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323 | ramafit {{runGSASprog $cmd} { |
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324 | Fits torsion angle distributions, particularly in peptide chains, |
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325 | for use in restraints.} |
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326 | } |
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327 | ref2asc {{runGSASprog $cmd} { |
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328 | Exports a GSAS reflection file to ASCII for use in non-GSAS programs} |
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329 | } |
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330 | ref2bin {{runGSASprog $cmd} { |
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331 | Imports an ASCII reflection file to the GSAS binary format.} |
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332 | } |
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333 | seqgsas {{runGSASwEXP $cmd} { |
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334 | Run a set of sequential GSAS refinements} |
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335 | } |
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336 | seqplot {{runGSASwEXP $cmd} { |
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337 | Plot results from set of sequential GSAS refinements} |
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338 | } |
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339 | mustrplot {{runGSASwEXP $cmd} { |
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340 | Create surface plot (display in GNUPLOT) showing effect of |
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341 | Stephens microstrain model} |
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342 | } |
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343 | |
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344 | composition {{composition} { |
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345 | Compute the unit cell and asymmetric unit contents for each phase |
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346 | taking occupancies and site multiplicities into account} |
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347 | } |
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348 | |
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349 | exp2xtl {{exp2xtl} { |
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350 | Save coordinates for a phase in an MSI xtl format file} |
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351 | } |
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352 | |
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353 | liveplot {{liveplot} { |
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354 | Create a plot of powder data (automatically updated) } |
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355 | } |
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356 | |
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357 | bkgedit {{bkgedit} { |
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358 | Fit background function to fixed background points} |
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359 | } |
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360 | excledt {{excledit} { |
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361 | Edit data limits and excluded data regions} |
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362 | } |
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363 | instedit {{EditInstFile} { |
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364 | Edit an instrument parameter file} |
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365 | } |
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366 | |
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367 | {liveplot_options} {liveplotopt { |
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368 | Used to set options for liveplot, for example, the |
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369 | histogram to be plotted} |
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370 | } |
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371 | |
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372 | convert {convfile { |
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373 | Convert a standard ASCII file to the direct access format used by GSAS (and for UNIX, the reverse)} |
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374 | } |
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375 | |
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376 | lstview {lstview { |
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377 | Create a box with scrollbars containing the current .LST file} |
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378 | } |
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379 | |
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380 | widplt {widplt { |
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381 | Displays the FWHM as a function of Q, 2Theta,... for UVWXY values input or read from an EXP file} |
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382 | } |
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383 | absplt {"widplt absplt" { |
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384 | Displays the intensity loss (1/Absorption Correction) Q, 2Theta,... for parameter values read from an EXP file} |
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385 | } |
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386 | |
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387 | "Override backspace" {- { |
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388 | This option is available in UNIX only, as there are different |
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389 | ways that backspace can be implemented. When option is set |
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390 | as "On," the backspace key is overridden to send a "delete" |
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391 | character. If backspace does not work in a program such as |
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392 | EXPEDT, change try the other setting for this option.} |
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393 | } |
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394 | SaveOptions {- { |
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395 | Save the current values for "Override backspace", |
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396 | "Sort atoms by", "Sort histograms by" and "archive EXP", etc. |
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397 | in ~/.gsas_config (c:\gsas.config)} |
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398 | } |
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399 | EraseHistory {DeleteHistoryRecords { |
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400 | Delete all but a selected number of history records; note that |
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401 | this speeds EXPGUI somewhat. Since the largest number for a |
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402 | history record is 999, the default is to also renumber the |
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403 | records starting with 1} |
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404 | } |
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405 | exit {- { |
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406 | Exit EXPGUI} |
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407 | } |
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408 | } |
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409 | |
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410 | # this defines the button bar contents |
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411 | set expgui(buttonlist) { |
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412 | expnam |
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413 | expedt |
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414 | genles |
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415 | powpref |
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416 | powplot |
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417 | lstview |
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418 | liveplot |
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419 | } |
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